RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 RHPN2P1A8MT19 583 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 P2RY10O00398 339 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 C1QL1O75973 258 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 CD63P08962 238 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 ALOX5APP20292 161 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 GLP1RP43220 463 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 ZP2Q05996 745 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 ADGRE4PQ86SQ3 457 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 SLC25A42Q86VD7 318 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 OR4D6Q8NGJ1 314 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 OR9A4Q8NGU2 314 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 KTI12Q96EK9 354 aaPredicted RBP12.38□□□□□ -0.43
SDC1-202ENST00000381150 LPAR4Q99677 370 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 TCEAL7Q9BRU2 100 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 GGACTQ9BVM4 153 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 CXorf65A6NEN9 183 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 NKX2-2O95096 273 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 PSG6Q00889 435 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 CYB5R2Q6BCY4 276 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 OR2A2Q6IF42 318 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.38□□□□□ -0.43
SDC1-202ENST00000381150 RNF166Q96A37 237 aaPredicted RBP12.38□□□□□ -0.43
SDC1-202ENST00000381150 C1orf198Q9H425 327 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 MAP1BP46821 2468 aaKnown RBP12.38□□□□□ -0.43
SDC1-202ENST00000381150 A0A0A6YYH2 397 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 CDC14CA4D256 554 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 A6NJ64 397 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 IFNA2P01563 188 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 MT-ND4LP03901 98 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 ZNF735P0CB33 412 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 RAB5AP20339 215 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 GSK3AP49840 483 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 CCR5P51681 352 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 ZNF674Q2M3X9 581 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 C14orf28Q4W4Y0 310 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 MESTQ5EB52 335 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 PMM1Q92871 262 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 SLAMF9Q96A28 289 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 ZNF587Q96SQ5 575 aaPredicted RBP12.38□□□□□ -0.43
SDC1-202ENST00000381150 RNF126Q9BV68 326 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 BANF2Q9H503 90 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 Q9N2J8 555 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 WIF1Q9Y5W5 379 aa12.38□□□□□ -0.43
SDC1-202ENST00000381150 A0A087WUJ7 227 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 TGFBR3LH3BV60 316 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 FGF16O43320 207 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 MPIG6BO95866 241 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 OR8U8P0C7N1 319 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 CD79AP11912 226 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 OR3A2P47893 321 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 ASCL1P50553 236 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 RAB38P57729 211 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 MEF2DQ14814 521 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 EIF5AL1Q6IS14 154 aaKnown RBP12.37□□□□□ -0.43
SDC1-202ENST00000381150 FAM180AQ6UWF9 173 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 IL34Q6ZMJ4 242 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 TMEM151BQ8IW70 566 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 MFSD8Q8NHS3 518 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 FGGYQ96C11 551 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 RAB3CQ96E17 227 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 NUDT9Q9BW91 350 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 SUCNR1Q9BXA5 334 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 ELL3Q9HB65 397 aaPredicted RBP12.37□□□□□ -0.43
SDC1-202ENST00000381150 FBXL21Q9UKT6 434 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 HEATR5AQ86XA9 2040 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 TEX13DA0A0J9YY54 714 aaPredicted RBP12.37□□□□□ -0.43
SDC1-202ENST00000381150 UMAD1C9J7I0 102 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 SLC33A1O00400 549 aaPredicted RBP12.37□□□□□ -0.43
SDC1-202ENST00000381150 EFSO43281 561 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 SLC35E2P0CK97 266 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 ACKR3P25106 362 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 RIDAP52758 137 aaKnown RBP12.37□□□□□ -0.43
SDC1-202ENST00000381150 MST1LQ2TV78 715 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 MIDNQ504T8 468 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 KIAA0895LQ68EN5 471 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.37□□□□□ -0.43
SDC1-202ENST00000381150 C15orf54Q8N8G6 183 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 OR10D4PQ8NGN7 298 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 GAL3ST4Q96RP7 486 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 SLC2A4RGQ9NR83 387 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 CLDN16Q9Y5I7 305 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 TMEM14AQ9Y6G1 99 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 TMEM131Q92545 1883 aa12.37□□□□□ -0.43
SDC1-202ENST00000381150 C2CD4DB7Z1M9 353 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 RNH1P13489 461 aaKnown RBP12.36□□□□□ -0.43
SDC1-202ENST00000381150 TACR3P29371 465 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 CAMLGP49069 296 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 C4orf17Q53FE4 359 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 AWAT2Q6E213 333 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 DRAM2Q6UX65 266 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 SLC30A7Q8NEW0 376 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 OR5D18Q8NGL1 313 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 NPRL2Q8WTW4 380 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 UBE2CO00762 179 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 ARPC3O15145 178 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 AK1P00568 194 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 FAM157CP0CG43 387 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 C1orf61Q13536 156 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 COL19A1Q14993 1142 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 CDC20BQ86Y33 519 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms