RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 TTTY12Q9BZ98 90 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 PRDM14Q9GZV8 571 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 NOX3Q9HBY0 568 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 OPN4Q9UHM6 478 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 KCNG2Q9UJ96 466 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 FBXL2Q9UKC9 423 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 RIF1Q5UIP0 2472 aaKnown RBP6.82□□□□□ -1.32
CDKL5-202ENST00000379996 NCKAP5O14513 1909 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 PINLYPA6NC86 204 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 HMSDA8MTL9 139 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 A8MVM7 634 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 MCRIP1C9JLW8 97 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 B3GALNT1O75752 331 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 ZNF432O94892 652 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 MPZP25189 248 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 RPL4P36578 427 aaKnown RBP6.82□□□□□ -1.32
CDKL5-202ENST00000379996 ART1P52961 327 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 SSBP1Q04837 148 aaKnown RBP6.82□□□□□ -1.32
CDKL5-202ENST00000379996 GRK1Q15835 563 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 LY6G6FQ5SQ64 297 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 TMEM69Q5SWH9 247 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 C1QL3Q5VWW1 255 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 OR7E24Q6IFN5 339 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 ZNF529Q6P280 563 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 LRRN1Q6UXK5 716 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 SLC38A6Q8IZM9 456 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 RBMXL3Q8N7X1 1067 aaKnown RBP6.82□□□□□ -1.32
CDKL5-202ENST00000379996 OR4K17Q8NGC6 315 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 OR8H1Q8NGG4 311 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 OR4C16Q8NGL9 310 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 PHF21AQ96BD5 680 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 MRPL48Q96GC5 212 aaKnown RBP6.82□□□□□ -1.32
CDKL5-202ENST00000379996 OR10A4Q9H209 315 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 KLHL13Q9P2N7 655 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 A0A0G2JMM0 328 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 LOC102725191A0A1B0GVB3 256 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 A0A1W2PPB8 328 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 A0A1W2PRS3 328 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 GJE1A6NN92 205 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 KIR3DP1A8MWS1 328 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 PMS2P2O95744 297 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 THBDP07204 575 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 ZNF250P15622 560 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 TACR3P29371 465 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 MEOX1P50221 254 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 SLC17A1Q14916 467 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 SGCBQ16585 318 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 RGS7BPQ6MZT1 257 aaPredicted RBP6.82□□□□□ -1.32
CDKL5-202ENST00000379996 C3orf33Q6P1S2 294 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 LINC00696Q6ZRV3 163 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 CDH26Q8IXH8 852 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 MFSD8Q8NHS3 518 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 S100A16Q96FQ6 103 aaKnown RBP6.82□□□□□ -1.32
CDKL5-202ENST00000379996 ALX4Q9H161 411 aaPredicted RBP6.82□□□□□ -1.32
CDKL5-202ENST00000379996 KCNK15Q9H427 330 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 G6PC2Q9NQR9 355 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 MED11Q9P086 117 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 B9D1Q9UPM9 204 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 HDGFL3Q9Y3E1 203 aa6.82□□□□□ -1.32
CDKL5-202ENST00000379996 TRAV36DV7A0A075B6V5 113 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 TMED7-TICAM2A0A0A6YYA0 188 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 TRAV14DV4A0A0A6YYC5 116 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 A0A1B0GTI1 187 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 SLC17A2O00624 439 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 SERPINI2O75830 405 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 ACTL6AO96019 429 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 CD74P04233 296 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 HIST1H2ABP04908 130 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 ISG15P05161 165 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 TACSTD2P09758 323 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 GABRA1P14867 456 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 ITPKBP27987 946 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 AP3S2P59780 193 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 QRFPP83859 136 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 RASGEF1BQ0VAM2 473 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 ZP4Q12836 540 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 HIST3H2AQ7L7L0 130 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 PM20D2Q8IYS1 436 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 GATSQ8NAP1 163 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 OR52B4Q8NGK2 314 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 OR2T35Q8NGX2 323 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 ZNF563Q8TA94 476 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 ASB5Q8WWX0 329 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 HIST1H2ACQ93077 130 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 RAB24Q969Q5 203 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 DDIT4LQ96D03 193 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 KLHL15Q96M94 604 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 SERINC1Q9NRX5 453 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 NUP50Q9UKX7 468 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 TMED7Q9Y3B3 224 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 A0A1W2PNV4 684 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 PRSS37A4D1T9 235 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 TVP23AA6NH52 213 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 BLOC1S5-TXNDC5H3BN57 136 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 PHYHO14832 338 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 OR2T1O43869 369 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 RPS27P42677 84 aaKnown RBP6.81□□□□□ -1.32
CDKL5-202ENST00000379996 RAC1P63000 192 aa6.81□□□□□ -1.32
CDKL5-202ENST00000379996 OC90Q02509 493 aaPredicted RBP6.81□□□□□ -1.32
CDKL5-202ENST00000379996 FOXF1Q12946 379 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms