RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 A0A087WWC5 75 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 CDHR4A6H8M9 788 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 A8MVM7 634 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 NTN1O95631 604 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 CTXN2P0C2S0 81 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 SLC35G6P0C7Q6 338 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 LMO1P25800 156 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 PPICP45877 212 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 RAE1P78406 368 aaKnown RBP6.7□□□□□ -1.34
CDKL5-201ENST00000379989 ACSM2AQ08AH3 577 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 CHIT1Q13231 466 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 ZNF311Q5JNZ3 666 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 ACSM2BQ68CK6 577 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 ZNF776Q68DI1 518 aaPredicted RBP6.7□□□□□ -1.34
CDKL5-201ENST00000379989 STEAP1BQ6NZ63 245 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 FBXO42Q6P3S6 717 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 ZNF433Q8N7K0 673 aaPredicted RBP6.7□□□□□ -1.34
CDKL5-201ENST00000379989 LMNTD1Q8N9Z9 388 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 BHLHE23Q8NDY6 225 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 OR6K2Q8NGY2 324 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 TSLPQ969D9 159 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 C16orf58Q96GQ5 468 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 FNDC11Q9BVV2 318 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 SLC5A7Q9GZV3 580 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 PHPT1Q9NRX4 125 aaPredicted RBP6.7□□□□□ -1.34
CDKL5-201ENST00000379989 ICKQ9UPZ9 632 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 DNAH12Q6ZR08 3092 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 TMEM265A0A087WTH1 108 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 PIN1P1O15428 100 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 NME2P1O60361 137 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 ZNF354AO60765 605 aaPredicted RBP6.7□□□□□ -1.34
CDKL5-201ENST00000379989 AHSA1O95433 338 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 SLC16A8O95907 504 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 NBEAP1P0C6P0 100 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 OR5H8P0DN80 308 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 SRMP19623 302 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 GZMHP20718 246 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 BCKDHBP21953 392 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 FCARP24071 287 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 CHATP28329 748 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 CAPZBP47756 277 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 ELLP55199 621 aaPredicted RBP6.7□□□□□ -1.34
CDKL5-201ENST00000379989 ZNF616Q08AN1 781 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 EBPQ15125 230 aaKnown RBP6.7□□□□□ -1.34
CDKL5-201ENST00000379989 SHHQ15465 462 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 UNQ9370/PRO34162Q6UXP9 181 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 TMPRSS7Q7RTY8 843 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 GBGT1Q8N5D6 347 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 CLEC1AQ8NC01 280 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 C15orf40Q8WUR7 153 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 FGF13Q92913 245 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 SCARF2Q96GP6 870 aaPredicted RBP6.7□□□□□ -1.34
CDKL5-201ENST00000379989 MRPS33Q9Y291 106 aaKnown RBP6.7□□□□□ -1.34
CDKL5-201ENST00000379989 A0A087WUU8 490 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 A0A087WV62 115 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 IFNL4K9M1U5 179 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 OPN1MWP04001 364 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 GBAP04062 536 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 IFNA6P05013 189 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 OPN1MW2P0DN77 364 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 OPN1MW3P0DN78 364 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 ZBTB25P24278 435 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 RPS21P63220 83 aaKnown RBP6.7□□□□□ -1.34
CDKL5-201ENST00000379989 MRPS21P82921 87 aaKnown RBP6.7□□□□□ -1.34
CDKL5-201ENST00000379989 REEP5Q00765 189 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 ZNF85Q03923 595 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 UBE2V1Q13404 147 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 CRMP1Q14194 572 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 MLC1Q15049 377 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 PGGHGQ32M88 737 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 SLCO4C1Q6ZQN7 724 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 WDFY1Q8IWB7 410 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 ZNF101Q8IZC7 436 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 C1orf87Q8N0U7 546 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 COMMD1Q8N668 190 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 ZNF615Q8N8J6 731 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 TMEM104Q8NE00 496 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 CASTOR1Q8WTX7 329 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 SLC38A5Q8WUX1 472 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 ORAOV1Q8WV07 137 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 KISS1RQ969F8 398 aaPredicted RBP6.7□□□□□ -1.34
CDKL5-201ENST00000379989 GABRG3Q99928 467 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 OR10A5Q9H207 317 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 NOX4Q9NPH5 578 aa6.7□□□□□ -1.34
CDKL5-201ENST00000379989 COL4A3Q01955 1670 aa6.69□□□□□ -1.34
CDKL5-201ENST00000379989 DOCK6Q96HP0 2047 aa6.69□□□□□ -1.34
CDKL5-201ENST00000379989 C22orf46C9J442 243 aa6.69□□□□□ -1.34
CDKL5-201ENST00000379989 MRPL3P09001 348 aaKnown RBP6.69□□□□□ -1.34
CDKL5-201ENST00000379989 ALPPL2P10696 532 aa6.69□□□□□ -1.34
CDKL5-201ENST00000379989 TIA1P31483 386 aaKnown RBP eCLIP6.69□□□□□ -1.34
CDKL5-201ENST00000379989 RPS26P62854 115 aaKnown RBP6.69□□□□□ -1.34
CDKL5-201ENST00000379989 PPP1R1AQ13522 171 aa6.69□□□□□ -1.34
CDKL5-201ENST00000379989 PDE7AQ13946 482 aa6.69□□□□□ -1.34
CDKL5-201ENST00000379989 SOHLH1Q5JUK2 328 aa6.69□□□□□ -1.34
CDKL5-201ENST00000379989 LYG2Q86SG7 212 aa6.69□□□□□ -1.34
CDKL5-201ENST00000379989 AMZ2Q86W34 360 aa6.69□□□□□ -1.34
CDKL5-201ENST00000379989 C7orf61Q8IZ16 206 aa6.69□□□□□ -1.34
CDKL5-201ENST00000379989 LINC00471Q8N535 108 aa6.69□□□□□ -1.34
CDKL5-201ENST00000379989 AGBL5Q8NDL9 886 aa6.69□□□□□ -1.34
CDKL5-201ENST00000379989 OR14L1PQ8NHC6 308 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms