RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 ACTBP60709 375 aa12.37□□□□□ -0.43
SNCAIP-203ENST00000379538 ACTG1P63261 375 aa12.37□□□□□ -0.43
SNCAIP-203ENST00000379538 ADAM8P78325 824 aa12.37□□□□□ -0.43
SNCAIP-203ENST00000379538 MEP1BQ16820 701 aa12.37□□□□□ -0.43
SNCAIP-203ENST00000379538 PHF19Q5T6S3 580 aa12.37□□□□□ -0.43
SNCAIP-203ENST00000379538 ZNF704Q6ZNC4 412 aaPredicted RBP12.37□□□□□ -0.43
SNCAIP-203ENST00000379538 FOXRED2Q8IWF2 684 aa12.37□□□□□ -0.43
SNCAIP-203ENST00000379538 ZNF595Q8IYB9 648 aa12.37□□□□□ -0.43
SNCAIP-203ENST00000379538 IFI44Q8TCB0 444 aa12.37□□□□□ -0.43
SNCAIP-203ENST00000379538 AKR1E2Q96JD6 320 aa12.37□□□□□ -0.43
SNCAIP-203ENST00000379538 WDR77Q9BQA1 342 aaPredicted RBP12.37□□□□□ -0.43
SNCAIP-203ENST00000379538 SLC25A21Q9BQT8 299 aaPredicted RBP12.37□□□□□ -0.43
SNCAIP-203ENST00000379538 ZNF251Q9BRH9 671 aa12.37□□□□□ -0.43
SNCAIP-203ENST00000379538 MRI1Q9BV20 369 aa12.37□□□□□ -0.43
SNCAIP-203ENST00000379538 SEC11CQ9BY50 192 aa12.37□□□□□ -0.43
SNCAIP-203ENST00000379538 ELOVL3Q9HB03 270 aa12.37□□□□□ -0.43
SNCAIP-203ENST00000379538 CHMP1AQ9HD42 196 aaPredicted RBP12.37□□□□□ -0.43
SNCAIP-203ENST00000379538 B9D1Q9UPM9 204 aa12.37□□□□□ -0.43
SNCAIP-203ENST00000379538 CEP250Q9BV73 2442 aa12.37□□□□□ -0.43
SNCAIP-203ENST00000379538 PCNX2A6NKB5 2137 aa12.37□□□□□ -0.43
SNCAIP-203ENST00000379538 GVINP1Q7Z2Y8 2422 aa12.37□□□□□ -0.43
SNCAIP-203ENST00000379538 IGKV1D-42A0A075B6H8 117 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 PMS2P1A4D2B8 440 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 H3BMH7 237 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 HLA-DQA2P01906 255 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 LPAR6P43657 344 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 RAB5BP61020 215 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 MFGE8Q08431 387 aaPredicted RBP12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 CDPF1Q6NVV7 123 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 LYG2Q86SG7 212 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 CDC20BQ86Y33 519 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 JAGN1Q8N5M9 183 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 STOML3Q8TAV4 291 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 RNF141Q8WVD5 230 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 SLC41A2Q96JW4 573 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 IP6K3Q96PC2 410 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 OR6C1Q96RD1 312 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 TRIM2Q9C040 744 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 UCK1Q9HA47 277 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 OCIAD1Q9NX40 245 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 OR5AC2Q9NZP5 309 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 IGHV5-10-1A0A0J9YXX1 117 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 SLC17A2O00624 439 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 TPT1P13693 172 aaKnown RBP12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 ALOX5APP20292 161 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 TLX1P31314 330 aaPredicted RBP12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 PJVKQ0ZLH3 352 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 PMPCAQ10713 525 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 KRBOX4Q5JUW0 171 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 ZNF585AQ6P3V2 769 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 PAPD4Q6PIY7 484 aaKnown RBP12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 MARCH3Q86UD3 253 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 OR51F2Q8NH61 342 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 TSLPQ969D9 159 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 HIST1H2BAQ96A08 127 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 RPS10P5Q9NQ39 176 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 CUTCQ9NTM9 273 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 FAM86C1Q9NVL1 165 aa12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 MRPS33Q9Y291 106 aaKnown RBP12.36□□□□□ -0.43
SNCAIP-203ENST00000379538 OIP5O43482 229 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 FBXO24O75426 580 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 WISP1O95388 367 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 CRHP06850 196 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 PSMB6P28072 239 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 GPR143P51810 404 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 MESTQ5EB52 335 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 SLC35D3Q5M8T2 416 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 NCMAPQ5T1S8 102 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 SLC23A3Q6PIS1 610 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 ZNF321PQ8N8H1 164 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 TMEM229BQ8NBD8 167 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 ZNF563Q8TA94 476 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 C4orf45Q96LM5 186 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 EDEM2Q9BV94 578 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 TMEM100Q9NV29 134 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 CLDN16Q9Y5I7 305 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 SPENQ96T58 3664 aaKnown RBP12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 A0A087WUJ7 227 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 RNASEK-C17orf49H0YIS7 233 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 ARPC3O15145 178 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 LRP3O75074 770 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 HRH1P35367 487 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 MAP3K8P41279 467 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 TSFMP43897 325 aaKnown RBP12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 HGFACQ04756 655 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 ALG10Q5BKT4 473 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 DHRS11Q6UWP2 260 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 EXD3Q8N9H8 876 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 CHST4Q8NCG5 386 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 SECTM1Q8WVN6 248 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 CCDC74BQ96LY2 380 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 DUSP23Q9BVJ7 150 aa12.35□□□□□ -0.43
SNCAIP-203ENST00000379538 C11orf98E9PRG8 122 aa12.34□□□□□ -0.43
SNCAIP-203ENST00000379538 CLN5O75503 358 aa12.34□□□□□ -0.43
SNCAIP-203ENST00000379538 STK17BO94768 372 aa12.34□□□□□ -0.43
SNCAIP-203ENST00000379538 PMP2P02689 132 aa12.34□□□□□ -0.43
SNCAIP-203ENST00000379538 SNRNP70P08621 437 aaKnown RBP12.34□□□□□ -0.43
SNCAIP-203ENST00000379538 HTR2CP28335 458 aa12.34□□□□□ -0.43
SNCAIP-203ENST00000379538 RBM34P42696 430 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms