RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 MRPS34P82930 218 aaKnown RBP11.82□□□□□ -0.52
PRPF18-202ENST00000378572 HGFACQ04756 655 aa11.82□□□□□ -0.52
PRPF18-202ENST00000378572 NRN1LQ496H8 165 aa11.82□□□□□ -0.52
PRPF18-202ENST00000378572 CDONQ4KMG0 1287 aa11.82□□□□□ -0.52
PRPF18-202ENST00000378572 DPY19L4Q7Z388 723 aa11.82□□□□□ -0.52
PRPF18-202ENST00000378572 SATL1Q86VE3 508 aa11.82□□□□□ -0.52
PRPF18-202ENST00000378572 ZCCHC24Q8N2G6 241 aaKnown RBP11.82□□□□□ -0.52
PRPF18-202ENST00000378572 NEU4Q8WWR8 484 aaPredicted RBP11.82□□□□□ -0.52
PRPF18-202ENST00000378572 C11orf40Q8WZ69 217 aa11.82□□□□□ -0.52
PRPF18-202ENST00000378572 OR5M11Q96RB7 305 aa11.82□□□□□ -0.52
PRPF18-202ENST00000378572 TPK1Q9H3S4 243 aa11.82□□□□□ -0.52
PRPF18-202ENST00000378572 ZNF442Q9H7R0 627 aa11.82□□□□□ -0.52
PRPF18-202ENST00000378572 POLE4Q9NR33 117 aa11.82□□□□□ -0.52
PRPF18-202ENST00000378572 COPS3Q9UNS2 423 aa11.82□□□□□ -0.52
PRPF18-202ENST00000378572 MALRD1Q5VYJ5 2156 aa11.82□□□□□ -0.52
PRPF18-202ENST00000378572 A0A1W2PPL8 197 aa11.81□□□□□ -0.52
PRPF18-202ENST00000378572 ZNF593O00488 134 aaPredicted RBP11.81□□□□□ -0.52
PRPF18-202ENST00000378572 PSMB9P28065 219 aa11.81□□□□□ -0.52
PRPF18-202ENST00000378572 BDH1Q02338 343 aa11.81□□□□□ -0.52
PRPF18-202ENST00000378572 EGR3Q06889 387 aa11.81□□□□□ -0.52
PRPF18-202ENST00000378572 MLLT11Q13015 90 aaPredicted RBP11.81□□□□□ -0.52
PRPF18-202ENST00000378572 MED22Q15528 200 aa11.81□□□□□ -0.52
PRPF18-202ENST00000378572 TIGD6Q17RP2 521 aa11.81□□□□□ -0.52
PRPF18-202ENST00000378572 CR1LQ2VPA4 569 aa11.81□□□□□ -0.52
PRPF18-202ENST00000378572 ZNF322Q6U7Q0 402 aaPredicted RBP11.81□□□□□ -0.52
PRPF18-202ENST00000378572 KCTD20Q7Z5Y7 419 aa11.81□□□□□ -0.52
PRPF18-202ENST00000378572 ASB17Q8WXJ9 295 aa11.81□□□□□ -0.52
PRPF18-202ENST00000378572 TMIGD2Q96BF3 282 aa11.81□□□□□ -0.52
PRPF18-202ENST00000378572 ZNF837Q96EG3 531 aaPredicted RBP11.81□□□□□ -0.52
PRPF18-202ENST00000378572 TBX5Q99593 518 aa11.81□□□□□ -0.52
PRPF18-202ENST00000378572 MGLLQ99685 303 aa11.81□□□□□ -0.52
PRPF18-202ENST00000378572 NOX3Q9HBY0 568 aa11.81□□□□□ -0.52
PRPF18-202ENST00000378572 LAMP5Q9UJQ1 280 aa11.81□□□□□ -0.52
PRPF18-202ENST00000378572 MPZL1O95297 269 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 HLA-HP01893 362 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 MT-ND5P03915 603 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 MSR1P21757 451 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 HCCSP53701 268 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 ZNF684Q5T5D7 378 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 OR2G6Q5TZ20 316 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 SLC18B1Q6NT16 456 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 ZNF813Q6ZN06 617 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 PLEKHG7Q6ZR37 379 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 ZNF627Q7L945 461 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 SSX6Q7RTT6 188 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 FAM169BQ8N8A8 192 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 HAVCR2Q8TDQ0 301 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 NABP1Q96AH0 204 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 CYB5R1Q9UHQ9 305 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 CMAHPQ9Y471 501 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 SPEF1Q9Y4P9 236 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 ZNF503-AS2A6NEH8 195 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 SULT1C4O75897 302 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 SCG5P05408 212 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 SPARCP09486 303 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 B4GALT1P15291 398 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 GALK2Q01415 458 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 MRPL28Q13084 256 aaKnown RBP11.8□□□□□ -0.52
PRPF18-202ENST00000378572 MEP1BQ16820 701 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 GSG1Q2KHT4 349 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 ARMCX4Q5H9R4 360 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 FAM27BQ5VT28 67 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 LIPNQ5VXI9 398 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 KCTD18Q6PI47 426 aaPredicted RBP11.8□□□□□ -0.52
PRPF18-202ENST00000378572 CCDC36Q8IYA8 594 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 RFLNBQ8N5W9 214 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 IL17RDQ8NFM7 739 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 UBASH3BQ8TF42 649 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 SNX33Q8WV41 574 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 SPRYD4Q8WW59 207 aaPredicted RBP11.8□□□□□ -0.52
PRPF18-202ENST00000378572 OPALINQ96PE5 141 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 WACQ9BTA9 647 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 FAM192AQ9GZU8 254 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 TMEM38BQ9NVV0 291 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 KLHDC2Q9Y2U9 406 aa11.8□□□□□ -0.52
PRPF18-202ENST00000378572 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.8□□□□□ -0.522e-17■■■■■ 34.8
PRPF18-202ENST00000378572 PSKH1P11801 424 aa11.79□□□□□ -0.52
PRPF18-202ENST00000378572 CDAP32320 146 aa11.79□□□□□ -0.52
PRPF18-202ENST00000378572 TAS2R43P59537 309 aa11.79□□□□□ -0.52
PRPF18-202ENST00000378572 ROM1Q03395 351 aa11.79□□□□□ -0.52
PRPF18-202ENST00000378572 TPBGQ13641 420 aa11.79□□□□□ -0.52
PRPF18-202ENST00000378572 DOC2BQ14184 412 aa11.79□□□□□ -0.52
PRPF18-202ENST00000378572 RHOUQ7L0Q8 258 aa11.79□□□□□ -0.52
PRPF18-202ENST00000378572 ST7LQ8TDW4 575 aa11.79□□□□□ -0.52
PRPF18-202ENST00000378572 GATAD2BQ8WXI9 593 aa11.79□□□□□ -0.52
PRPF18-202ENST00000378572 MS4A3Q96HJ5 214 aa11.79□□□□□ -0.52
PRPF18-202ENST00000378572 C4orf36Q96KX1 117 aa11.79□□□□□ -0.52
PRPF18-202ENST00000378572 DOK1Q99704 481 aa11.79□□□□□ -0.52
PRPF18-202ENST00000378572 FOXB1Q99853 325 aa11.79□□□□□ -0.52
PRPF18-202ENST00000378572 SOX7Q9BT81 388 aa11.79□□□□□ -0.52
PRPF18-202ENST00000378572 ABHD6Q9BV23 337 aa11.79□□□□□ -0.52
PRPF18-202ENST00000378572 RBM38Q9H0Z9 239 aaKnown RBP11.79□□□□□ -0.52
PRPF18-202ENST00000378572 NARFLQ9H6Q4 476 aa11.79□□□□□ -0.52
PRPF18-202ENST00000378572 SIAEQ9HAT2 523 aa11.79□□□□□ -0.52
PRPF18-202ENST00000378572 TRIM36Q9NQ86 728 aa11.79□□□□□ -0.52
PRPF18-202ENST00000378572 BABAM2Q9NXR7 383 aa11.79□□□□□ -0.52
PRPF18-202ENST00000378572 A0A1W2PPW3 197 aa11.78□□□□□ -0.52
PRPF18-202ENST00000378572 LYNX1G3V0Z9 82 aa11.78□□□□□ -0.52
PRPF18-202ENST00000378572 M0R233 179 aa11.78□□□□□ -0.52
PRPF18-202ENST00000378572 KRT8P05787 483 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms