RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 MAB21L1Q13394 359 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 ZMYND11Q15326 602 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 ATP6AP1Q15904 470 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 KLHL12Q53G59 568 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 C1orf146Q5VVC0 180 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 DRAM2Q6UX65 266 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 OR5K1Q8NHB7 308 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 RNF133Q8WVZ7 376 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 LRTOMTQ8WZ04 291 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 DUS3LQ96G46 650 aaKnown RBP12.95□□□□□ -0.34
RAB4B-202ENST00000378307 GAL3ST1Q99999 423 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 MMADHCQ9H3L0 296 aaPredicted RBP12.95□□□□□ -0.34
RAB4B-202ENST00000378307 G6PC2Q9NQR9 355 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 PAPOLBQ9NRJ5 636 aaKnown RBP12.95□□□□□ -0.34
RAB4B-202ENST00000378307 TMEM100Q9NV29 134 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 UBAP1Q9NZ09 502 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 ZNF319Q9P2F9 582 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 KLHDC2Q9Y2U9 406 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 AP4S1Q9Y587 144 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 CD300LBA8K4G0 201 aa12.94□□□□□ -0.34
RAB4B-202ENST00000378307 ZNF878C9JN71 531 aa12.94□□□□□ -0.34
RAB4B-202ENST00000378307 TMEM178BH3BS89 294 aa12.94□□□□□ -0.34
RAB4B-202ENST00000378307 M0R129 80 aa12.94□□□□□ -0.34
RAB4B-202ENST00000378307 CYB5R3P00387 301 aaPredicted RBP12.94□□□□□ -0.34
RAB4B-202ENST00000378307 IFNA2P01563 188 aa12.94□□□□□ -0.34
RAB4B-202ENST00000378307 PAICSP22234 425 aaKnown RBP12.94□□□□□ -0.34
RAB4B-202ENST00000378307 ZFP36P26651 326 aaKnown RBP12.94□□□□□ -0.34
RAB4B-202ENST00000378307 HCCSP53701 268 aa12.94□□□□□ -0.34
RAB4B-202ENST00000378307 SEC61A1P61619 476 aaKnown RBP12.94□□□□□ -0.34
RAB4B-202ENST00000378307 SLC3A1Q07837 685 aa12.94□□□□□ -0.34
RAB4B-202ENST00000378307 MALLQ13021 153 aa12.94□□□□□ -0.34
RAB4B-202ENST00000378307 PTGES3Q15185 160 aaKnown RBP12.94□□□□□ -0.34
RAB4B-202ENST00000378307 TAF13Q15543 124 aa12.94□□□□□ -0.34
RAB4B-202ENST00000378307 FAM201AQ5SY85 155 aa12.94□□□□□ -0.34
RAB4B-202ENST00000378307 ASRGL1Q7L266 308 aa12.94□□□□□ -0.34
RAB4B-202ENST00000378307 CXXC5Q7LFL8 322 aaKnown RBP12.94□□□□□ -0.34
RAB4B-202ENST00000378307 PRSS45Q7RTY3 260 aa12.94□□□□□ -0.34
RAB4B-202ENST00000378307 MOGAT3Q86VF5 341 aa12.94□□□□□ -0.34
RAB4B-202ENST00000378307 OR51F2Q8NH61 342 aa12.94□□□□□ -0.34
RAB4B-202ENST00000378307 DVL3Q92997 716 aaPredicted RBP12.94□□□□□ -0.34
RAB4B-202ENST00000378307 TVP23BQ9NYZ1 205 aa12.94□□□□□ -0.34
RAB4B-202ENST00000378307 PRKYO43930 277 aa12.93□□□□□ -0.34
RAB4B-202ENST00000378307 CA6P23280 308 aa12.93□□□□□ -0.34
RAB4B-202ENST00000378307 OPRL1P41146 370 aa12.93□□□□□ -0.34
RAB4B-202ENST00000378307 NAA10P41227 235 aaPredicted RBP12.93□□□□□ -0.34
RAB4B-202ENST00000378307 CX3CR1P49238 355 aa12.93□□□□□ -0.34
RAB4B-202ENST00000378307 BTG1P62324 171 aa12.93□□□□□ -0.34
RAB4B-202ENST00000378307 SNAPC1Q16533 368 aa12.93□□□□□ -0.34
RAB4B-202ENST00000378307 PRAMEF6Q5VXH4 476 aa12.93□□□□□ -0.34
RAB4B-202ENST00000378307 FAHD2BQ6P2I3 314 aaPredicted RBP12.93□□□□□ -0.34
RAB4B-202ENST00000378307 MRPL21Q7Z2W9 205 aaKnown RBP12.93□□□□□ -0.34
RAB4B-202ENST00000378307 BCDIN3DQ7Z5W3 292 aaKnown RBP12.93□□□□□ -0.34
RAB4B-202ENST00000378307 LRRC28Q86X40 367 aaPredicted RBP12.93□□□□□ -0.34
RAB4B-202ENST00000378307 OTOSQ8NHW6 89 aa12.93□□□□□ -0.34
RAB4B-202ENST00000378307 SPRYD4Q8WW59 207 aaPredicted RBP12.93□□□□□ -0.34
RAB4B-202ENST00000378307 SGK3Q96BR1 496 aa12.93□□□□□ -0.34
RAB4B-202ENST00000378307 RAB39BQ96DA2 213 aa12.93□□□□□ -0.34
RAB4B-202ENST00000378307 FAHD2AQ96GK7 314 aa12.93□□□□□ -0.34
RAB4B-202ENST00000378307 PPP1R3EQ9H7J1 279 aa12.93□□□□□ -0.34
RAB4B-202ENST00000378307 DNAJC27Q9NZQ0 273 aa12.93□□□□□ -0.34
RAB4B-202ENST00000378307 KIF17Q9P2E2 1029 aa12.93□□□□□ -0.34
RAB4B-202ENST00000378307 TRAV20A0A0B4J274 112 aa12.92□□□□□ -0.34
RAB4B-202ENST00000378307 CCDC182A6NF36 153 aa12.92□□□□□ -0.34
RAB4B-202ENST00000378307 G3V2T6 193 aa12.92□□□□□ -0.34
RAB4B-202ENST00000378307 PHF1O43189 567 aaPredicted RBP12.92□□□□□ -0.34
RAB4B-202ENST00000378307 PRODHO43272 600 aa12.92□□□□□ -0.34
RAB4B-202ENST00000378307 HNF1AP20823 631 aa12.92□□□□□ -0.34
RAB4B-202ENST00000378307 FASP25445 335 aa12.92□□□□□ -0.34
RAB4B-202ENST00000378307 SRP9P49458 86 aaKnown RBP12.92□□□□□ -0.34
RAB4B-202ENST00000378307 ZNF121P58317 390 aaPredicted RBP12.92□□□□□ -0.34
RAB4B-202ENST00000378307 GRB2P62993 217 aaKnown RBP12.92□□□□□ -0.34
RAB4B-202ENST00000378307 LCN2P80188 198 aa12.92□□□□□ -0.34
RAB4B-202ENST00000378307 APOFQ13790 326 aa12.92□□□□□ -0.34
RAB4B-202ENST00000378307 MPPED2Q15777 294 aa12.92□□□□□ -0.34
RAB4B-202ENST00000378307 KDM4DQ6B0I6 523 aa12.92□□□□□ -0.34
RAB4B-202ENST00000378307 SHFQ7M4L6 423 aa12.92□□□□□ -0.34
RAB4B-202ENST00000378307 PEG10Q86TG7 708 aaKnown RBP12.92□□□□□ -0.34
RAB4B-202ENST00000378307 PARP8Q8N3A8 854 aa12.92□□□□□ -0.34
RAB4B-202ENST00000378307 SPSB4Q96A44 273 aa12.92□□□□□ -0.34
RAB4B-202ENST00000378307 TMPRSS13Q9BYE2 586 aa12.92□□□□□ -0.34
RAB4B-202ENST00000378307 SEMA6AQ9H2E6 1030 aa12.92□□□□□ -0.34
RAB4B-202ENST00000378307 TMEM165Q9HC07 324 aa12.92□□□□□ -0.34
RAB4B-202ENST00000378307 DOCK11Q5JSL3 2073 aa12.92□□□□□ -0.34
RAB4B-202ENST00000378307 GGT3PA6NGU5 568 aa12.91□□□□□ -0.34
RAB4B-202ENST00000378307 PRR32B1ATL7 298 aa12.91□□□□□ -0.34
RAB4B-202ENST00000378307 TBX1O43435 398 aa12.91□□□□□ -0.34
RAB4B-202ENST00000378307 ANXA2P07355 339 aaKnown RBP12.91□□□□□ -0.34
RAB4B-202ENST00000378307 LYNP07948 512 aa12.91□□□□□ -0.34
RAB4B-202ENST00000378307 ANPEPP15144 967 aa12.91□□□□□ -0.34
RAB4B-202ENST00000378307 HSD11B1P28845 292 aa12.91□□□□□ -0.34
RAB4B-202ENST00000378307 POLR2IP36954 125 aaKnown RBP12.91□□□□□ -0.34
RAB4B-202ENST00000378307 CD200P41217 278 aa12.91□□□□□ -0.34
RAB4B-202ENST00000378307 RAD23AP54725 363 aa12.91□□□□□ -0.34
RAB4B-202ENST00000378307 RPS7P62081 194 aaKnown RBP12.91□□□□□ -0.34
RAB4B-202ENST00000378307 EFNB1P98172 346 aa12.91□□□□□ -0.34
RAB4B-202ENST00000378307 FAM3AP98173 230 aa12.91□□□□□ -0.34
RAB4B-202ENST00000378307 SLC35D3Q5M8T2 416 aa12.91□□□□□ -0.34
RAB4B-202ENST00000378307 FAM57BQ71RH2 274 aa12.91□□□□□ -0.34
RAB4B-202ENST00000378307 SLC16A9Q7RTY1 509 aa12.91□□□□□ -0.34
RAB4B-202ENST00000378307 C19orf18Q8NEA5 215 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms