RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 PSENENQ9NZ42 101 aa12.78□□□□□ -0.36
TRIM13-202ENST00000378182 AGERQ15109 404 aa12.78□□□□□ -0.36
TRIM13-202ENST00000378182 PTDSS2Q9BVG9 487 aa12.78□□□□□ -0.36
TRIM13-202ENST00000378182 MYOZ1Q9NP98 299 aaPredicted RBP12.78□□□□□ -0.36
TRIM13-202ENST00000378182 H0YIG0 161 aa12.78□□□□□ -0.36
TRIM13-202ENST00000378182 CR2P20023 1033 aa12.78□□□□□ -0.36
TRIM13-202ENST00000378182 CCR5P51681 352 aa12.78□□□□□ -0.36
TRIM13-202ENST00000378182 TAS2R45P59539 299 aa12.78□□□□□ -0.36
TRIM13-202ENST00000378182 OR2A2Q6IF42 318 aa12.78□□□□□ -0.36
TRIM13-202ENST00000378182 CDX2Q99626 313 aaPredicted RBP12.78□□□□□ -0.36
TRIM13-202ENST00000378182 COA4Q9NYJ1 87 aa12.78□□□□□ -0.36
TRIM13-202ENST00000378182 CSAG2Q9Y5P2 127 aa12.78□□□□□ -0.36
TRIM13-202ENST00000378182 SCGB1C2P0DMR2 95 aa12.78□□□□□ -0.36
TRIM13-202ENST00000378182 SOX8P57073 446 aa12.78□□□□□ -0.36
TRIM13-202ENST00000378182 CYS1Q717R9 158 aa12.78□□□□□ -0.36
TRIM13-202ENST00000378182 OR10P1Q8NGE3 313 aa12.78□□□□□ -0.36
TRIM13-202ENST00000378182 MAGT1Q9H0U3 335 aa12.78□□□□□ -0.36
TRIM13-202ENST00000378182 ICAM5Q9UMF0 924 aa12.78□□□□□ -0.36
TRIM13-202ENST00000378182 TARM1B6A8C7 271 aa12.78□□□□□ -0.36
TRIM13-202ENST00000378182 TNFRSF10CO14798 259 aa12.78□□□□□ -0.36
TRIM13-202ENST00000378182 CD22P20273 847 aa12.78□□□□□ -0.36
TRIM13-202ENST00000378182 ECI1P42126 302 aa12.78□□□□□ -0.36
TRIM13-202ENST00000378182 YIPF5Q969M3 257 aa12.78□□□□□ -0.36
TRIM13-202ENST00000378182 ANKRD60Q9BZ19 345 aa12.78□□□□□ -0.36
TRIM13-202ENST00000378182 DSCR4P56555 118 aaPredicted RBP12.77□□□□□ -0.36
TRIM13-202ENST00000378182 GSG1Q2KHT4 349 aa12.77□□□□□ -0.36
TRIM13-202ENST00000378182 DHRS7BQ6IAN0 325 aaPredicted RBP12.77□□□□□ -0.36
TRIM13-202ENST00000378182 C19orf48Q6RUI8 117 aa12.77□□□□□ -0.36
TRIM13-202ENST00000378182 SPRED1Q7Z699 444 aa12.77□□□□□ -0.36
TRIM13-202ENST00000378182 SDF2Q99470 211 aa12.77□□□□□ -0.36
TRIM13-202ENST00000378182 SCPEP1Q9HB40 452 aa12.77□□□□□ -0.36
TRIM13-202ENST00000378182 LAMA4Q16363 1823 aa12.77□□□□□ -0.36
TRIM13-202ENST00000378182 TMIGD3P0DMS9 266 aaPredicted RBP12.77□□□□□ -0.36
TRIM13-202ENST00000378182 CNR1P21554 472 aa12.77□□□□□ -0.36
TRIM13-202ENST00000378182 CAPZBP47756 277 aa12.77□□□□□ -0.36
TRIM13-202ENST00000378182 MICBQ29980 383 aa12.77□□□□□ -0.36
TRIM13-202ENST00000378182 TMEM81Q6P7N7 255 aa12.77□□□□□ -0.36
TRIM13-202ENST00000378182 PDLIM5Q96HC4 596 aaKnown RBP12.77□□□□□ -0.36
TRIM13-202ENST00000378182 A0A0B4J203 849 aa12.77□□□□□ -0.36
TRIM13-202ENST00000378182 RPL18Q07020 188 aaKnown RBP12.77□□□□□ -0.36
TRIM13-202ENST00000378182 GGTA1PQ4G0N0 100 aa12.77□□□□□ -0.36
TRIM13-202ENST00000378182 RNFT1Q5M7Z0 435 aa12.77□□□□□ -0.36
TRIM13-202ENST00000378182 ZNF425Q6IV72 752 aa12.77□□□□□ -0.36
TRIM13-202ENST00000378182 GDPGP1Q6ZNW5 385 aa12.77□□□□□ -0.36
TRIM13-202ENST00000378182 RHOUQ7L0Q8 258 aa12.77□□□□□ -0.36
TRIM13-202ENST00000378182 AAMDCQ9H7C9 122 aa12.77□□□□□ -0.36
TRIM13-202ENST00000378182 KIR2DS1A0A191URI9 304 aa12.77□□□□□ -0.37
TRIM13-202ENST00000378182 UBE2L5PA0A1B0GUS4 154 aa12.77□□□□□ -0.37
TRIM13-202ENST00000378182 H3BMH7 237 aa12.77□□□□□ -0.37
TRIM13-202ENST00000378182 KIR2DS4P43632 304 aa12.77□□□□□ -0.37
TRIM13-202ENST00000378182 SNRPGP62308 76 aaKnown RBP12.77□□□□□ -0.37
TRIM13-202ENST00000378182 ZNF90Q03938 601 aa12.77□□□□□ -0.37
TRIM13-202ENST00000378182 KIR2DS1Q14954 304 aa12.77□□□□□ -0.37
TRIM13-202ENST00000378182 PLK5Q496M5 336 aa12.77□□□□□ -0.37
TRIM13-202ENST00000378182 TMEM211Q6ICI0 200 aa12.77□□□□□ -0.37
TRIM13-202ENST00000378182 H3F3CQ6NXT2 135 aa12.77□□□□□ -0.37
TRIM13-202ENST00000378182 SVBPQ8N300 66 aa12.77□□□□□ -0.37
TRIM13-202ENST00000378182 RPL3LQ92901 407 aaKnown RBP12.77□□□□□ -0.37
TRIM13-202ENST00000378182 PBOV1Q9GZY1 135 aa12.77□□□□□ -0.37
TRIM13-202ENST00000378182 RAB1AP62820 205 aa12.77□□□□□ -0.37
TRIM13-202ENST00000378182 HTR4Q13639 388 aa12.77□□□□□ -0.37
TRIM13-202ENST00000378182 CEACAM16Q2WEN9 425 aa12.77□□□□□ -0.37
TRIM13-202ENST00000378182 SOHLH1Q5JUK2 328 aa12.77□□□□□ -0.37
TRIM13-202ENST00000378182 SLC36A1Q7Z2H8 476 aa12.77□□□□□ -0.37
TRIM13-202ENST00000378182 SLC7A6Q92536 515 aa12.77□□□□□ -0.37
TRIM13-202ENST00000378182 POM121L2Q96KW2 1035 aa12.77□□□□□ -0.37
TRIM13-202ENST00000378182 FCGR2CP31995 323 aa12.77□□□□□ -0.37
TRIM13-202ENST00000378182 TNFAIP6P98066 277 aaPredicted RBP12.77□□□□□ -0.37
TRIM13-202ENST00000378182 FOXF1Q12946 379 aa12.77□□□□□ -0.37
TRIM13-202ENST00000378182 RPUSD4Q96CM3 377 aaKnown RBP12.77□□□□□ -0.37
TRIM13-202ENST00000378182 ETV7Q9Y603 341 aa12.77□□□□□ -0.37
TRIM13-202ENST00000378182 IGHV3-43A0A0B4J1X8 118 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 IGHV3-43DP0DP04 118 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 CA6P23280 308 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 APEX1P27695 318 aaKnown RBP12.76□□□□□ -0.37
TRIM13-202ENST00000378182 SLC35D3Q5M8T2 416 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 ANKRD33Q7Z3H0 272 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 KCNRGQ8N5I3 272 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 OR13C5Q8NGS8 318 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 DOK5Q9P104 306 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 TDRD6O60522 2096 aaKnown RBP12.76□□□□□ -0.37
TRIM13-202ENST00000378182 PMP22Q01453 160 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 ACOT6Q3I5F7 207 aaPredicted RBP12.76□□□□□ -0.37
TRIM13-202ENST00000378182 LYG1Q8N1E2 194 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 SLC38A9Q8NBW4 561 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 OR1L4Q8NGR5 311 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 MED17Q9NVC6 651 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 PCOLCE2Q9UKZ9 415 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 ST3GAL6Q9Y274 331 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 A0A087WV62 115 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 GPRIN2O60269 458 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 SDHAP31040 664 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 FAM109BQ6ICB4 259 aaPredicted RBP12.76□□□□□ -0.37
TRIM13-202ENST00000378182 CHODLQ9H9P2 273 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 A4GNTQ9UNA3 340 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 CHST2Q9Y4C5 530 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 NPY1RP25929 384 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 PTPMT1Q8WUK0 201 aaPredicted RBP12.76□□□□□ -0.37
TRIM13-202ENST00000378182 ZNF486Q96H40 463 aaPredicted RBP12.76□□□□□ -0.37
TRIM13-202ENST00000378182 LAT2Q9GZY6 243 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms