RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 KLHL22Q53GT1 634 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 TMEM255AQ5JRV8 349 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 FAM209AQ5JX71 171 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 USP51Q70EK9 711 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 MRPL21Q7Z2W9 205 aaKnown RBP11.3□□□□□ -0.6
CKAP2-202ENST00000378034 EGFL6Q8IUX8 553 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 ITFG2Q969R8 447 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 REPIN1Q9BWE0 567 aaKnown RBP11.3□□□□□ -0.6
CKAP2-202ENST00000378034 OTOGQ6ZRI0 2925 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 IQCF6A8MYZ5 107 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 PRR32B1ATL7 298 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 SSX4O60224 188 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 FADS2O95864 444 aaKnown RBP11.3□□□□□ -0.6
CKAP2-202ENST00000378034 KRT8P05787 483 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 HSPA13P48723 471 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 MMP16P51512 607 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 ALKBH6Q3KRA9 238 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 GLYATL3Q5SZD4 288 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 PLEKHG7Q6ZR37 379 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 DNM1P46Q6ZS02 220 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 FAM57BQ71RH2 274 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 KCTD20Q7Z5Y7 419 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 ZCCHC24Q8N2G6 241 aaKnown RBP11.3□□□□□ -0.6
CKAP2-202ENST00000378034 OR8G5Q8NG78 346 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 LGALS12Q96DT0 336 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 MRPL48Q96GC5 212 aaKnown RBP11.3□□□□□ -0.6
CKAP2-202ENST00000378034 PGAM5Q96HS1 289 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 INPP5EQ9NRR6 644 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 CREBBPQ92793 2442 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 TMEM269A0A1B0GVZ9 245 aa11.29□□□□□ -0.6
CKAP2-202ENST00000378034 IRGMA1A4Y4 181 aa11.29□□□□□ -0.6
CKAP2-202ENST00000378034 METTL15A6NJ78 407 aa11.29□□□□□ -0.6
CKAP2-202ENST00000378034 TBX1O43435 398 aa11.29□□□□□ -0.6
CKAP2-202ENST00000378034 APOL3O95236 402 aa11.29□□□□□ -0.6
CKAP2-202ENST00000378034 AQP4P55087 323 aa11.29□□□□□ -0.6
CKAP2-202ENST00000378034 MRPS11P82912 194 aaKnown RBP11.29□□□□□ -0.6
CKAP2-202ENST00000378034 ZNF92Q03936 586 aa11.29□□□□□ -0.6
CKAP2-202ENST00000378034 CDK5R2Q13319 367 aa11.29□□□□□ -0.6
CKAP2-202ENST00000378034 TIGD6Q17RP2 521 aa11.29□□□□□ -0.6
CKAP2-202ENST00000378034 CLEC12BQ2HXU8 276 aa11.29□□□□□ -0.6
CKAP2-202ENST00000378034 ZNF684Q5T5D7 378 aa11.29□□□□□ -0.6
CKAP2-202ENST00000378034 OR2T2Q6IF00 324 aa11.29□□□□□ -0.6
CKAP2-202ENST00000378034 TGIF2LYQ8IUE0 185 aa11.29□□□□□ -0.6
CKAP2-202ENST00000378034 RFLNBQ8N5W9 214 aa11.29□□□□□ -0.6
CKAP2-202ENST00000378034 ACBD7Q8N6N7 88 aa11.29□□□□□ -0.6
CKAP2-202ENST00000378034 SGK3Q96BR1 496 aa11.29□□□□□ -0.6
CKAP2-202ENST00000378034 TBX5Q99593 518 aa11.29□□□□□ -0.6
CKAP2-202ENST00000378034 TPK1Q9H3S4 243 aa11.29□□□□□ -0.6
CKAP2-202ENST00000378034 MOB1AQ9H8S9 216 aa11.29□□□□□ -0.6
CKAP2-202ENST00000378034 FAM206AQ9NX38 181 aa11.29□□□□□ -0.6
CKAP2-202ENST00000378034 MRM2Q9UI43 246 aaKnown RBP11.29□□□□□ -0.6
CKAP2-202ENST00000378034 N6AMT1Q9Y5N5 214 aa11.29□□□□□ -0.6
CKAP2-202ENST00000378034 DAPL1A0PJW8 107 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 PSMD9O00233 223 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 CD55P08174 381 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 DDOSTP39656 456 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 ZNF85Q03923 595 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 CLEC2AQ6UVW9 174 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 SSX6Q7RTT6 188 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 THAP5Q7Z6K1 395 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 OR13G1Q8NGZ3 307 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 OR2AE1Q8NHA4 323 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 CNIH3Q8TBE1 160 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 FBLIM1Q8WUP2 373 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 SLC22A4Q9H015 551 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 BRD7Q9NPI1 651 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 R4GMQ9 66 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 A0A0U1RQV5 110 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 A0A1B0GWJ7 208 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 GGT3PA6NGU5 568 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 ZSCAN5BA6NJL1 495 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 NDUFS8O00217 210 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 IGHV1-46P01743 117 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 IGHA1P01876 353 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 GNAO1P09471 354 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 TACSTD2P09758 323 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 DAOP14920 347 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 TNFSF4P23510 183 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 PDLIM4P50479 330 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 SNCBQ16143 134 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 FAM220AQ7Z4H9 259 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 YIPF7Q8N8F6 280 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 WFDC11Q8NEX6 87 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 UBASH3BQ8TF42 649 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 SPRYD4Q8WW59 207 aaPredicted RBP11.28□□□□□ -0.6
CKAP2-202ENST00000378034 REEP6Q96HR9 211 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 SLC30A2Q9BRI3 323 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 RHNO1Q9BSD3 238 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 JAM3Q9BX67 310 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 TTTY10Q9BZA0 68 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 EGLN1Q9GZT9 426 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 RASSF4Q9H2L5 321 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 MSL2Q9HCI7 577 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 AMBNQ9NP70 447 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 FGF20Q9NP95 211 aaPredicted RBP11.28□□□□□ -0.6
CKAP2-202ENST00000378034 DECR2Q9NUI1 292 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 NUFIP1Q9UHK0 495 aaKnown RBP11.28□□□□□ -0.6
CKAP2-202ENST00000378034 NOP16Q9Y3C1 178 aaKnown RBP11.28□□□□□ -0.6
CKAP2-202ENST00000378034 SNX5Q9Y5X3 404 aa11.28□□□□□ -0.6
CKAP2-202ENST00000378034 LOC390937A0A1W2PQ73 354 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms