RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 MUC20Q8N307 709 aaPredicted RBP14.19□□□□□ -0.14
HMGN4-201ENST00000377575 OR4M2Q8NGB6 313 aa14.19□□□□□ -0.14
HMGN4-201ENST00000377575 TMEM158Q8WZ71 300 aa14.19□□□□□ -0.14
HMGN4-201ENST00000377575 SIGLEC11Q96RL6 698 aa14.19□□□□□ -0.14
HMGN4-201ENST00000377575 SLC22A4Q9H015 551 aa14.19□□□□□ -0.14
HMGN4-201ENST00000377575 OR51V1Q9H2C8 321 aa14.19□□□□□ -0.14
HMGN4-201ENST00000377575 SP140LQ9H930 580 aa14.19□□□□□ -0.14
HMGN4-201ENST00000377575 MARCH7Q9H992 704 aa14.19□□□□□ -0.14
HMGN4-201ENST00000377575 PAPOLBQ9NRJ5 636 aaKnown RBP14.19□□□□□ -0.14
HMGN4-201ENST00000377575 DCAF16Q9NXF7 216 aa14.19□□□□□ -0.14
HMGN4-201ENST00000377575 LRRC30A6NM36 301 aa14.18□□□□□ -0.14
HMGN4-201ENST00000377575 F5H5P2 479 aa14.18□□□□□ -0.14
HMGN4-201ENST00000377575 H0YL77 283 aa14.18□□□□□ -0.14
HMGN4-201ENST00000377575 PRODHO43272 600 aa14.18□□□□□ -0.14
HMGN4-201ENST00000377575 XRCC2O43543 280 aa14.18□□□□□ -0.14
HMGN4-201ENST00000377575 PLPP2O43688 288 aa14.18□□□□□ -0.14
HMGN4-201ENST00000377575 APOC1P02654 83 aa14.18□□□□□ -0.14
HMGN4-201ENST00000377575 SBK2P0C263 348 aa14.18□□□□□ -0.14
HMGN4-201ENST00000377575 MDH2P40926 338 aaKnown RBP14.18□□□□□ -0.14
HMGN4-201ENST00000377575 PRKXP51817 358 aa14.18□□□□□ -0.14
HMGN4-201ENST00000377575 PRSS12P56730 875 aa14.18□□□□□ -0.14
HMGN4-201ENST00000377575 CDK5Q00535 292 aa14.18□□□□□ -0.14
HMGN4-201ENST00000377575 GLYATL3Q5SZD4 288 aa14.18□□□□□ -0.14
HMGN4-201ENST00000377575 C1orf146Q5VVC0 180 aa14.18□□□□□ -0.14
HMGN4-201ENST00000377575 FAHD2BQ6P2I3 314 aaPredicted RBP14.18□□□□□ -0.14
HMGN4-201ENST00000377575 PLBD1Q6P4A8 553 aa14.18□□□□□ -0.14
HMGN4-201ENST00000377575 SPATC1Q76KD6 591 aa14.18□□□□□ -0.14
HMGN4-201ENST00000377575 CELF2-AS1Q8N7Q2 184 aa14.18□□□□□ -0.14
HMGN4-201ENST00000377575 FAHD2AQ96GK7 314 aa14.18□□□□□ -0.14
HMGN4-201ENST00000377575 SLC25A19Q9HC21 320 aa14.18□□□□□ -0.14
HMGN4-201ENST00000377575 G6PC2Q9NQR9 355 aa14.18□□□□□ -0.14
HMGN4-201ENST00000377575 WNK2Q9Y3S1 2297 aa14.18□□□□□ -0.14
HMGN4-201ENST00000377575 GGT3PA6NGU5 568 aa14.17□□□□□ -0.14
HMGN4-201ENST00000377575 CD300LBA8K4G0 201 aa14.17□□□□□ -0.14
HMGN4-201ENST00000377575 TMEM178BH3BS89 294 aa14.17□□□□□ -0.14
HMGN4-201ENST00000377575 J3QLI3 93 aa14.17□□□□□ -0.14
HMGN4-201ENST00000377575 HLA-DPB1P04440 258 aa14.17□□□□□ -0.14
HMGN4-201ENST00000377575 GATA3P23771 443 aa14.17□□□□□ -0.14
HMGN4-201ENST00000377575 CX3CR1P49238 355 aa14.17□□□□□ -0.14
HMGN4-201ENST00000377575 ZNF92Q03936 586 aa14.17□□□□□ -0.14
HMGN4-201ENST00000377575 ZMYND11Q15326 602 aa14.17□□□□□ -0.14
HMGN4-201ENST00000377575 ZNF181Q2M3W8 571 aa14.17□□□□□ -0.14
HMGN4-201ENST00000377575 KLHL12Q53G59 568 aa14.17□□□□□ -0.14
HMGN4-201ENST00000377575 SLC35D3Q5M8T2 416 aa14.17□□□□□ -0.14
HMGN4-201ENST00000377575 RHOUQ7L0Q8 258 aa14.17□□□□□ -0.14
HMGN4-201ENST00000377575 TIGD4Q8IY51 512 aa14.17□□□□□ -0.14
HMGN4-201ENST00000377575 C1orf87Q8N0U7 546 aa14.17□□□□□ -0.14
HMGN4-201ENST00000377575 PARP8Q8N3A8 854 aa14.17□□□□□ -0.14
HMGN4-201ENST00000377575 OR2AE1Q8NHA4 323 aa14.17□□□□□ -0.14
HMGN4-201ENST00000377575 OR5K1Q8NHB7 308 aa14.17□□□□□ -0.14
HMGN4-201ENST00000377575 RNF133Q8WVZ7 376 aa14.17□□□□□ -0.14
HMGN4-201ENST00000377575 UTP4Q969X6 686 aaKnown RBP14.17□□□□□ -0.14
HMGN4-201ENST00000377575 ZMYND19Q96E35 227 aaPredicted RBP14.17□□□□□ -0.14
HMGN4-201ENST00000377575 ADAT1Q9BUB4 502 aaKnown RBP14.17□□□□□ -0.14
HMGN4-201ENST00000377575 REPIN1Q9BWE0 567 aaKnown RBP14.17□□□□□ -0.14
HMGN4-201ENST00000377575 PRRG3Q9BZD7 231 aa14.17□□□□□ -0.14
HMGN4-201ENST00000377575 NTN4Q9HB63 628 aa14.17□□□□□ -0.14
HMGN4-201ENST00000377575 TBX1O43435 398 aa14.16□□□□□ -0.14
HMGN4-201ENST00000377575 FOXH1O75593 365 aa14.16□□□□□ -0.14
HMGN4-201ENST00000377575 ANXA2P07355 339 aaKnown RBP14.16□□□□□ -0.14
HMGN4-201ENST00000377575 SLC2A1P11166 492 aa14.16□□□□□ -0.14
HMGN4-201ENST00000377575 FCGR1AP12314 374 aa14.16□□□□□ -0.14
HMGN4-201ENST00000377575 IRF2P14316 349 aa14.16□□□□□ -0.14
HMGN4-201ENST00000377575 CD200P41217 278 aa14.16□□□□□ -0.14
HMGN4-201ENST00000377575 GATA4P43694 442 aa14.16□□□□□ -0.14
HMGN4-201ENST00000377575 RPS7P62081 194 aaKnown RBP14.16□□□□□ -0.14
HMGN4-201ENST00000377575 HNRNPA0Q13151 305 aaKnown RBP14.16□□□□□ -0.14
HMGN4-201ENST00000377575 OR8G1Q15617 311 aa14.16□□□□□ -0.14
HMGN4-201ENST00000377575 ATP6AP1Q15904 470 aa14.16□□□□□ -0.14
HMGN4-201ENST00000377575 DCAF12L2Q5VW00 463 aa14.16□□□□□ -0.14
HMGN4-201ENST00000377575 FAHD1Q6P587 224 aa14.16□□□□□ -0.14
HMGN4-201ENST00000377575 MOGAT3Q86VF5 341 aa14.16□□□□□ -0.14
HMGN4-201ENST00000377575 LRRC28Q86X40 367 aaPredicted RBP14.16□□□□□ -0.14
HMGN4-201ENST00000377575 CPOQ8IVL8 374 aa14.16□□□□□ -0.14
HMGN4-201ENST00000377575 RFLNBQ8N5W9 214 aa14.16□□□□□ -0.14
HMGN4-201ENST00000377575 ZNF454Q8N9F8 522 aa14.16□□□□□ -0.14
HMGN4-201ENST00000377575 SPATA3Q8NHX4 192 aa14.16□□□□□ -0.14
HMGN4-201ENST00000377575 ZNF420Q8TAQ5 688 aaPredicted RBP14.16□□□□□ -0.14
HMGN4-201ENST00000377575 ERGIC1Q969X5 290 aa14.16□□□□□ -0.14
HMGN4-201ENST00000377575 ABHD6Q9BV23 337 aa14.16□□□□□ -0.14
HMGN4-201ENST00000377575 PATZ1Q9HBE1 687 aaKnown RBP14.16□□□□□ -0.14
HMGN4-201ENST00000377575 MRPL15Q9P015 296 aaKnown RBP14.16□□□□□ -0.14
HMGN4-201ENST00000377575 N6AMT1Q9Y5N5 214 aa14.16□□□□□ -0.14
HMGN4-201ENST00000377575 GMDSO60547 372 aa14.15□□□□□ -0.14
HMGN4-201ENST00000377575 CIB2O75838 187 aa14.15□□□□□ -0.14
HMGN4-201ENST00000377575 LYNP07948 512 aa14.15□□□□□ -0.14
HMGN4-201ENST00000377575 H2BFMP0C1H6 154 aa14.15□□□□□ -0.14
HMGN4-201ENST00000377575 CA6P23280 308 aa14.15□□□□□ -0.14
HMGN4-201ENST00000377575 FASP25445 335 aa14.15□□□□□ -0.14
HMGN4-201ENST00000377575 OPRL1P41146 370 aa14.15□□□□□ -0.14
HMGN4-201ENST00000377575 CRISP1P54107 249 aa14.15□□□□□ -0.14
HMGN4-201ENST00000377575 LCN2P80188 198 aa14.15□□□□□ -0.14
HMGN4-201ENST00000377575 SNAPC1Q16533 368 aa14.15□□□□□ -0.14
HMGN4-201ENST00000377575 TIGD6Q17RP2 521 aa14.15□□□□□ -0.14
HMGN4-201ENST00000377575 OR52H1Q8NGJ2 320 aa14.15□□□□□ -0.14
HMGN4-201ENST00000377575 OR11L1Q8NGX0 322 aa14.15□□□□□ -0.14
HMGN4-201ENST00000377575 OTOSQ8NHW6 89 aa14.15□□□□□ -0.14
HMGN4-201ENST00000377575 SPSB4Q96A44 273 aa14.15□□□□□ -0.14
HMGN4-201ENST00000377575 METTL17Q9H7H0 456 aaPredicted RBP14.15□□□□□ -0.14
HMGN4-201ENST00000377575 KRT84Q9NSB2 600 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms