RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 FAM98BQ52LJ0 330 aaKnown RBP17.6■□□□□ 0.41
VSX1-201ENST00000376707 OR2T5Q6IEZ7 315 aa17.6■□□□□ 0.41
VSX1-201ENST00000376707 PARP8Q8N3A8 854 aa17.6■□□□□ 0.41
VSX1-201ENST00000376707 CELF2-AS1Q8N7Q2 184 aa17.6■□□□□ 0.41
VSX1-201ENST00000376707 AQP11Q8NBQ7 271 aa17.6■□□□□ 0.41
VSX1-201ENST00000376707 PROKR2Q8NFJ6 384 aa17.6■□□□□ 0.41
VSX1-201ENST00000376707 OR11L1Q8NGX0 322 aa17.6■□□□□ 0.41
VSX1-201ENST00000376707 OR2T4Q8NH00 348 aa17.6■□□□□ 0.41
VSX1-201ENST00000376707 OR2T29Q8NH02 315 aa17.6■□□□□ 0.41
VSX1-201ENST00000376707 RAB40AQ8WXH6 277 aa17.6■□□□□ 0.41
VSX1-201ENST00000376707 ERGIC1Q969X5 290 aa17.6■□□□□ 0.41
VSX1-201ENST00000376707 ASB9Q96DX5 294 aa17.6■□□□□ 0.41
VSX1-201ENST00000376707 ZNF799Q96GE5 643 aa17.6■□□□□ 0.41
VSX1-201ENST00000376707 MAP6Q96JE9 813 aa17.6■□□□□ 0.41
VSX1-201ENST00000376707 DGCR6LQ9BY27 220 aa17.6■□□□□ 0.41
VSX1-201ENST00000376707 C1orf21Q9H246 121 aa17.6■□□□□ 0.41
VSX1-201ENST00000376707 ZMAT3Q9HA38 289 aaKnown RBP17.6■□□□□ 0.41
VSX1-201ENST00000376707 VNN3Q9NY84 501 aa17.6■□□□□ 0.41
VSX1-201ENST00000376707 IGHV2-70DA0A0C4DH43 119 aa17.59■□□□□ 0.41
VSX1-201ENST00000376707 PPIAL4GP0DN37 164 aa17.59■□□□□ 0.41
VSX1-201ENST00000376707 HKR1P10072 659 aa17.59■□□□□ 0.41
VSX1-201ENST00000376707 PYCR1P32322 319 aa17.59■□□□□ 0.41
VSX1-201ENST00000376707 PITPNBP48739 271 aa17.59■□□□□ 0.41
VSX1-201ENST00000376707 RAD23AP54725 363 aa17.59■□□□□ 0.41
VSX1-201ENST00000376707 PAX2Q02962 417 aa17.59■□□□□ 0.41
VSX1-201ENST00000376707 FOXL1Q12952 345 aa17.59■□□□□ 0.41
VSX1-201ENST00000376707 MAB21L1Q13394 359 aa17.59■□□□□ 0.41
VSX1-201ENST00000376707 MICAQ29983 383 aa17.59■□□□□ 0.41
VSX1-201ENST00000376707 CYB561A3Q8NBI2 242 aa17.59■□□□□ 0.41
VSX1-201ENST00000376707 REEP1Q9H902 201 aa17.59■□□□□ 0.41
VSX1-201ENST00000376707 BAIAP2Q9UQB8 552 aa17.59■□□□□ 0.41
VSX1-201ENST00000376707 NOP16Q9Y3C1 178 aaKnown RBP17.59■□□□□ 0.41
VSX1-201ENST00000376707 SAMHD1Q9Y3Z3 626 aaKnown RBP17.59■□□□□ 0.41
VSX1-201ENST00000376707 IGHV3OR16-10A0A075B7F0 116 aa17.58■□□□□ 0.4
VSX1-201ENST00000376707 DYNC1I1O14576 645 aa17.58■□□□□ 0.4
VSX1-201ENST00000376707 IGHV4-38-2P0DP08 117 aa17.58■□□□□ 0.4
VSX1-201ENST00000376707 EGR1P18146 543 aa17.58■□□□□ 0.4
VSX1-201ENST00000376707 CD200P41217 278 aa17.58■□□□□ 0.4
VSX1-201ENST00000376707 PPP1R8Q12972 351 aaKnown RBP17.58■□□□□ 0.4
VSX1-201ENST00000376707 GK3PQ14409 553 aa17.58■□□□□ 0.4
VSX1-201ENST00000376707 OR8G1Q15617 311 aa17.58■□□□□ 0.4
VSX1-201ENST00000376707 PRAMEF6Q5VXH4 476 aa17.58■□□□□ 0.4
VSX1-201ENST00000376707 DCDC5Q6ZRR9 648 aa17.58■□□□□ 0.4
VSX1-201ENST00000376707 SLC37A3Q8NCC5 494 aa17.58■□□□□ 0.4
VSX1-201ENST00000376707 Q8TCH9 128 aa17.58■□□□□ 0.4
VSX1-201ENST00000376707 ZNRF4Q8WWF5 429 aa17.58■□□□□ 0.4
VSX1-201ENST00000376707 ZNF48Q96MX3 618 aaPredicted RBP17.58■□□□□ 0.4
VSX1-201ENST00000376707 SLC22A4Q9H015 551 aa17.58■□□□□ 0.4
VSX1-201ENST00000376707 UFSP2Q9NUQ7 469 aa17.58■□□□□ 0.4
VSX1-201ENST00000376707 TBC1D23Q9NUY8 699 aa17.58■□□□□ 0.4
VSX1-201ENST00000376707 TAS2R1Q9NYW7 299 aa17.58■□□□□ 0.4
VSX1-201ENST00000376707 CLN8Q9UBY8 286 aa17.58■□□□□ 0.4
VSX1-201ENST00000376707 U3KQV3 271 aa17.58■□□□□ 0.4
VSX1-201ENST00000376707 TVP23AA6NH52 213 aa17.57■□□□□ 0.4
VSX1-201ENST00000376707 FAM20BO75063 409 aa17.57■□□□□ 0.4
VSX1-201ENST00000376707 RAP2AP10114 183 aa17.57■□□□□ 0.4
VSX1-201ENST00000376707 CA6P23280 308 aa17.57■□□□□ 0.4
VSX1-201ENST00000376707 RPS27P42677 84 aaKnown RBP17.57■□□□□ 0.4
VSX1-201ENST00000376707 MTNR1AP48039 350 aa17.57■□□□□ 0.4
VSX1-201ENST00000376707 CD300LDQ6UXZ3 194 aa17.57■□□□□ 0.4
VSX1-201ENST00000376707 OR10S1Q8NGN2 331 aa17.57■□□□□ 0.4
VSX1-201ENST00000376707 SLC25A28Q96A46 364 aa17.57■□□□□ 0.4
VSX1-201ENST00000376707 UPRTQ96BW1 309 aa17.57■□□□□ 0.4
VSX1-201ENST00000376707 TSSK6Q9BXA6 273 aa17.57■□□□□ 0.4
VSX1-201ENST00000376707 NMNAT2Q9BZQ4 307 aa17.57■□□□□ 0.4
VSX1-201ENST00000376707 PCDHGB1Q9Y5G3 927 aa17.57■□□□□ 0.4
VSX1-201ENST00000376707 TRAV40A0A0B4J280 105 aa17.56■□□□□ 0.4
VSX1-201ENST00000376707 KIR2DS1A0A191URI9 304 aa17.56■□□□□ 0.4
VSX1-201ENST00000376707 GGT3PA6NGU5 568 aa17.56■□□□□ 0.4
VSX1-201ENST00000376707 CD300LBA8K4G0 201 aa17.56■□□□□ 0.4
VSX1-201ENST00000376707 ACOT8O14734 319 aa17.56■□□□□ 0.4
VSX1-201ENST00000376707 OTX1P32242 354 aaPredicted RBP17.56■□□□□ 0.4
VSX1-201ENST00000376707 SLC25A1P53007 311 aa17.56■□□□□ 0.4
VSX1-201ENST00000376707 MPPED2Q15777 294 aa17.56■□□□□ 0.4
VSX1-201ENST00000376707 PCK2Q16822 640 aa17.56■□□□□ 0.4
VSX1-201ENST00000376707 SNAI3Q3KNW1 292 aa17.56■□□□□ 0.4
VSX1-201ENST00000376707 LYPD2Q6UXB3 125 aa17.56■□□□□ 0.4
VSX1-201ENST00000376707 C19orf18Q8NEA5 215 aa17.56■□□□□ 0.4
VSX1-201ENST00000376707 OR2T33Q8NG76 320 aa17.56■□□□□ 0.4
VSX1-201ENST00000376707 OR51L1Q8NGJ5 315 aa17.56■□□□□ 0.4
VSX1-201ENST00000376707 OR4Q3Q8NH05 313 aa17.56■□□□□ 0.4
VSX1-201ENST00000376707 DACT3Q96B18 629 aaPredicted RBP17.56■□□□□ 0.4
VSX1-201ENST00000376707 C1orf147Q96MC9 270 aaPredicted RBP17.56■□□□□ 0.4
VSX1-201ENST00000376707 NUDT16L1Q9BRJ7 211 aaKnown RBP17.56■□□□□ 0.4
VSX1-201ENST00000376707 COPS4Q9BT78 406 aa17.56■□□□□ 0.4
VSX1-201ENST00000376707 ADAT1Q9BUB4 502 aaKnown RBP17.56■□□□□ 0.4
VSX1-201ENST00000376707 FN3KRPQ9HA64 309 aa17.56■□□□□ 0.4
VSX1-201ENST00000376707 COMMD3-BMI1R4GMX3 469 aa17.56■□□□□ 0.4
VSX1-201ENST00000376707 PHYHO14832 338 aa17.55■□□□□ 0.4
VSX1-201ENST00000376707 RNASE1P07998 156 aaKnown RBP17.55■□□□□ 0.4
VSX1-201ENST00000376707 ZNF92Q03936 586 aa17.55■□□□□ 0.4
VSX1-201ENST00000376707 CRMP1Q14194 572 aa17.55■□□□□ 0.4
VSX1-201ENST00000376707 WDR25Q64LD2 544 aaPredicted RBP17.55■□□□□ 0.4
VSX1-201ENST00000376707 LYPD4Q6UWN0 246 aa17.55■□□□□ 0.4
VSX1-201ENST00000376707 DRAM2Q6UX65 266 aa17.55■□□□□ 0.4
VSX1-201ENST00000376707 C9orf139Q6ZV77 190 aa17.55■□□□□ 0.4
VSX1-201ENST00000376707 DCXRQ7Z4W1 244 aa17.55■□□□□ 0.4
VSX1-201ENST00000376707 OR9Q1Q8NGQ5 310 aa17.55■□□□□ 0.4
VSX1-201ENST00000376707 OR2AE1Q8NHA4 323 aa17.55■□□□□ 0.4
VSX1-201ENST00000376707 CCDC124Q96CT7 223 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms