RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 OR51F2Q8NH61 342 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 PLEKHF2Q9H8W4 249 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 SLC17A5Q9NRA2 495 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 ATG2BQ96BY7 2078 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 SPTBP11277 2137 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 S100A8P05109 93 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 TOMM34Q15785 309 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-203ENST00000375274 LTC4SQ16873 150 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 DMRTC1Q5HYR2 192 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 BRICD5Q6PL45 260 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 ADGRG3Q86Y34 549 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 DMBX1Q8NFW5 382 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 GPR119Q8TDV5 335 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 BTF3L4Q96K17 158 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 NUDT9Q9BW91 350 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 AK3Q9UIJ7 227 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 GDF2Q9UK05 429 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-203ENST00000375274 ADAMTSL1Q8N6G6 1762 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 FAM221AA4D161 298 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 C17orf112F2Z3M2 114 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 TUSC2O75896 110 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 NXPH2O95156 264 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 SCGB1D1O95968 90 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 IGHA1P01876 353 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 C1QCP02747 245 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 CISD3P0C7P0 127 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 MLF2Q15773 248 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-203ENST00000375274 ZNF239Q16600 458 aaKnown RBP10.41□□□□□ -0.74
PTCH1-203ENST00000375274 GRAMD2AQ8IUY3 354 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 RTN4IP1Q8WWV3 396 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-203ENST00000375274 GNPNAT1Q96EK6 184 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-203ENST00000375274 PATZ1Q9HBE1 687 aaKnown RBP10.41□□□□□ -0.74
PTCH1-203ENST00000375274 ANKRD10Q9NXR5 420 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 PCDHB10Q9UN67 800 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 FOCADQ5VW36 1801 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 A0A1B0GTH9 108 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 ZNF587BE7ETH6 402 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 NRG2O14511 850 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-203ENST00000375274 LRP3O75074 770 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 PTGER4P35408 488 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 TMEM41BQ5BJD5 291 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 ZNF626Q68DY1 528 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 RPUSD3Q6P087 351 aaKnown RBP10.41□□□□□ -0.74
PTCH1-203ENST00000375274 NHLRC1Q6VVB1 395 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 GAB2Q9UQC2 676 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 SLCO1B1Q9Y6L6 691 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 SHANK3Q9BYB0 1731 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 ARL3P36405 182 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 CDKN2AP42771 156 aaKnown RBP10.41□□□□□ -0.74
PTCH1-203ENST00000375274 SCAND1P57086 179 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 MZT1Q08AG7 82 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 HAGHQ16775 308 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 TP53I13Q8NBR0 393 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-203ENST00000375274 OR4D9Q8NGE8 314 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 ARV1Q9H2C2 271 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 HAO2Q9NYQ3 351 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 GHRLQ9UBU3 117 aa10.41□□□□□ -0.74
PTCH1-203ENST00000375274 STRAPQ9Y3F4 350 aaKnown RBP10.41□□□□□ -0.74
PTCH1-203ENST00000375274 DOCK5Q9H7D0 1870 aa10.4□□□□□ -0.74
PTCH1-203ENST00000375274 AHCTF1Q8WYP5 2266 aa10.4□□□□□ -0.74
PTCH1-203ENST00000375274 CTAG2O75638 210 aa10.4□□□□□ -0.74
PTCH1-203ENST00000375274 IGHV3-9P01782 118 aa10.4□□□□□ -0.74
PTCH1-203ENST00000375274 HLA-HP01893 362 aa10.4□□□□□ -0.74
PTCH1-203ENST00000375274 CTXN2P0C2S0 81 aa10.4□□□□□ -0.74
PTCH1-203ENST00000375274 CTGFP29279 349 aa10.4□□□□□ -0.74
PTCH1-203ENST00000375274 PSMB3P49720 205 aa10.4□□□□□ -0.74
PTCH1-203ENST00000375274 TMEM268Q5VZI3 342 aa10.4□□□□□ -0.74
PTCH1-203ENST00000375274 OR8G2PQ6IF36 304 aa10.4□□□□□ -0.74
PTCH1-203ENST00000375274 NRTNQ99748 197 aa10.4□□□□□ -0.74
PTCH1-203ENST00000375274 RHOFQ9HBH0 211 aa10.4□□□□□ -0.74
PTCH1-203ENST00000375274 ARGFXA6NJG6 315 aa10.4□□□□□ -0.74
PTCH1-203ENST00000375274 HSD17B6O14756 317 aa10.4□□□□□ -0.74
PTCH1-203ENST00000375274 F10P00742 488 aa10.4□□□□□ -0.74
PTCH1-203ENST00000375274 SNCAP37840 140 aa10.4□□□□□ -0.74
PTCH1-203ENST00000375274 PRICKLE4Q2TBC4 344 aa10.4□□□□□ -0.74
PTCH1-203ENST00000375274 C9orf62Q8N4C0 152 aa10.4□□□□□ -0.74
PTCH1-203ENST00000375274 PTP4A1Q93096 173 aa10.4□□□□□ -0.74
PTCH1-203ENST00000375274 COX14Q96I36 57 aa10.4□□□□□ -0.74
PTCH1-203ENST00000375274 KCNJ15Q99712 375 aa10.4□□□□□ -0.74
PTCH1-203ENST00000375274 ANKRD20A5PA0PJZ0 165 aa10.4□□□□□ -0.75
PTCH1-203ENST00000375274 ADAM10O14672 748 aa10.4□□□□□ -0.75
PTCH1-203ENST00000375274 XRCC2O43543 280 aa10.4□□□□□ -0.75
PTCH1-203ENST00000375274 TBXA2RP21731 343 aa10.4□□□□□ -0.75
PTCH1-203ENST00000375274 CCR5P51681 352 aa10.4□□□□□ -0.75
PTCH1-203ENST00000375274 PIGPP57054 158 aa10.4□□□□□ -0.75
PTCH1-203ENST00000375274 ZNF121P58317 390 aaPredicted RBP10.4□□□□□ -0.75
PTCH1-203ENST00000375274 SHBQ15464 509 aa10.4□□□□□ -0.75
PTCH1-203ENST00000375274 PWWP2BQ6NUJ5 590 aa10.4□□□□□ -0.75
PTCH1-203ENST00000375274 UQCC3Q6UW78 93 aa10.4□□□□□ -0.75
PTCH1-203ENST00000375274 NAA40Q86UY6 237 aa10.4□□□□□ -0.75
PTCH1-203ENST00000375274 C1orf87Q8N0U7 546 aa10.4□□□□□ -0.75
PTCH1-203ENST00000375274 ZDHHC22Q8N966 263 aa10.4□□□□□ -0.75
PTCH1-203ENST00000375274 C11orf40Q8WZ69 217 aa10.4□□□□□ -0.75
PTCH1-203ENST00000375274 C8orf44Q96CB5 159 aa10.4□□□□□ -0.75
PTCH1-203ENST00000375274 MSI2Q96DH6 328 aaKnown RBP10.4□□□□□ -0.75
PTCH1-203ENST00000375274 MRGPRX4Q96LA9 322 aa10.4□□□□□ -0.75
PTCH1-203ENST00000375274 NXF2Q9GZY0 626 aaKnown RBP10.4□□□□□ -0.75
PTCH1-203ENST00000375274 A0A1W2PPC4 97 aa10.39□□□□□ -0.75
PTCH1-203ENST00000375274 HMSDA8MTL9 139 aa10.39□□□□□ -0.75
PTCH1-203ENST00000375274 RRASP10301 218 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms