RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 MTCH2Q9Y6C9 303 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 DOCK8Q8NF50 2099 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 PLXND1Q9Y4D7 1925 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 A0A0U1RQF3 1178 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 MBD3L5A6NJ08 208 aaPredicted RBP7.99□□□□□ -1.13
UBR4-201ENST00000375218 NPIPB6E9PJ23 425 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 NCR1O76036 304 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 HLA-HP01893 362 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 HOXB5P09067 269 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 PRPH2P23942 346 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 NCALDP61601 193 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 HLA-BQ31612 363 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 TMEM176BQ3YBM2 270 aaPredicted RBP7.99□□□□□ -1.13
UBR4-201ENST00000375218 AVPI1Q5T686 147 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 PRR27Q6MZM9 219 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 LANCL3Q6ZV70 420 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 TSEN54Q7Z6J9 526 aaKnown RBP7.99□□□□□ -1.13
UBR4-201ENST00000375218 SLC38A9Q8NBW4 561 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 OR4K15Q8NH41 348 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 PYCR2Q96C36 320 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 AGAP4Q96P64 663 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 MS4A8Q9BY19 250 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 LHPPQ9H008 270 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 MAP1LC3AQ9H492 121 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 PTGES2Q9H7Z7 377 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 UBQLN1Q9UMX0 589 aaKnown RBP7.99□□□□□ -1.13
UBR4-201ENST00000375218 TIMM10BQ9Y5J6 103 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 SIGLEC16A6NMB1 481 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 TRAPPC2LH3BP13 241 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 IFNA1P01562 189 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 ZNF239Q16600 458 aaKnown RBP7.99□□□□□ -1.13
UBR4-201ENST00000375218 HIST2H3PS2Q5TEC6 136 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 METRNLQ641Q3 311 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 STEAP1BQ6NZ63 245 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 BAP18Q8IXM2 172 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 LYG1Q8N1E2 194 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 SLC44A3Q8N4M1 653 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 OR2M7Q8NG81 312 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 OR4M2Q8NGB6 313 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 OR1B1Q8NGR6 318 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 SUSD6Q92537 303 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 CXorf36Q9H7Y0 433 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 GPATCH2LQ9NWQ4 482 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 STEAP1Q9UHE8 339 aa7.99□□□□□ -1.13
UBR4-201ENST00000375218 CEP290O15078 2479 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 CENPVL1A0A0U1RR11 272 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 CENPVL3A0A0U1RRI6 287 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 FGF7P21781 194 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 HRH2P25021 359 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 DCTP40126 519 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 XCR1P46094 333 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 ZNF134P52741 427 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 EMX2Q04743 252 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 ABRAXAS2Q15018 415 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 TEAD2Q15562 447 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 BATFQ16520 125 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 TAF9Q16594 264 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 LTC4SQ16873 150 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 LRRC75BQ2VPJ9 315 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 SLC34A3Q8N130 599 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 OR6N2Q8NGY6 317 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 ACSS3Q9H6R3 686 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 CEPT1Q9Y6K0 416 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 KRBOX1C9JBD0 128 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 AP4M1O00189 453 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 UGT2B17O75795 530 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 SNRPBP14678 240 aaKnown RBP7.98□□□□□ -1.13
UBR4-201ENST00000375218 HIST1H1BP16401 226 aaKnown RBP7.98□□□□□ -1.13
UBR4-201ENST00000375218 MATN1P21941 496 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 MIPP30301 263 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 RPL4P36578 427 aaKnown RBP7.98□□□□□ -1.13
UBR4-201ENST00000375218 ARG2P78540 354 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 INSM1Q01101 510 aaPredicted RBP7.98□□□□□ -1.13
UBR4-201ENST00000375218 RGS1Q08116 209 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 TMEM132DQ14C87 1099 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 ISXQ2M1V0 245 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 ACTL10Q5JWF8 245 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.98□□□□□ -1.13
UBR4-201ENST00000375218 ADGRE4PQ86SQ3 457 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 TMEM25Q86YD3 366 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 DEDD2Q8WXF8 326 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 ZNF689Q96CS4 500 aaPredicted RBP7.98□□□□□ -1.13
UBR4-201ENST00000375218 MOCOSQ96EN8 888 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 MRPL17Q9NRX2 175 aaKnown RBP7.98□□□□□ -1.13
UBR4-201ENST00000375218 SLC25A37Q9NYZ2 338 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 FRRS1LQ9P0K9 344 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 CASTOR2A6NHX0 329 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 C17orf100A8MU93 164 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 NGFRP08138 427 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 SLC6A8P48029 635 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 FABP9Q0Z7S8 132 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 DEFB115Q30KQ5 88 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 HAGHLQ6PII5 290 aaPredicted RBP7.98□□□□□ -1.13
UBR4-201ENST00000375218 ZNF367Q7RTV3 350 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 NAA40Q86UY6 237 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 ACVR1CQ8NER5 493 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 ZC3HAV1LQ96H79 300 aaKnown RBP7.98□□□□□ -1.13
UBR4-201ENST00000375218 TLNRD1Q9H1K6 362 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 ZNF385DQ9H6B1 395 aa7.98□□□□□ -1.13
UBR4-201ENST00000375218 FBXL2Q9UKC9 423 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms