RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 EFSO43281 561 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 CTRB1P17538 263 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 TPBGQ13641 420 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 CDK5R1Q15078 307 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 CTRB2Q6GPI1 263 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 SIGLECL1Q8N7X8 197 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 OR13D1Q8NGV5 346 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 PLSCR3Q9NRY6 295 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 NINQ8N4C6 2090 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 J3QR89 54 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 CD3DP04234 171 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 GLAP06280 429 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 ST6GAL1P15907 406 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 APOBEC1P41238 236 aaKnown RBP11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 TRMT12Q53H54 448 aaKnown RBP11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 TMEM88Q6PEY1 159 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 TEX261Q6UWH6 196 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 MAML2Q8IZL2 1156 aaPredicted RBP11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 ZFP62Q8NB50 900 aaPredicted RBP11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 CADM4Q8NFZ8 388 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 OR51E1Q8TCB6 317 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 SHARPINQ9H0F6 387 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 NGBQ9NPG2 151 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 SERGEFQ9UGK8 458 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 U3KQ87 197 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 M0R082 166 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 BCL2L11O43521 198 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 AKR7A3O95154 331 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 HOXC4P09017 264 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 NTF3P20783 257 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 BSGP35613 385 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 SOX18P35713 384 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 EGR3Q06889 387 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 OR5B3Q8NH48 314 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 GPR173Q9NS66 373 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 OTOFQ9HC10 1997 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 DUSP8Q13202 625 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 ELAVL1Q15717 326 aaKnown RBP11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 ARTNQ5T4W7 220 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 PRAMEF5Q5TYX0 476 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 PRAMEF6Q5VXH4 476 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 THNSL2Q86YJ6 484 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 LHX4Q969G2 390 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 SLAMF6Q96DU3 332 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 TVP23CQ96ET8 276 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 G3V3Q6 166 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 G3V3Y1 287 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 NME1P15531 152 aaKnown RBP11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 GPNMBQ14956 572 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 LYG2Q86SG7 212 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 GALNT16Q8N428 558 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 OR5AP2Q8NGF4 316 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 OR13C5Q8NGS8 318 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 EID2BQ96D98 161 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 FAM122AQ96E09 287 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 C2orf50Q96LR7 162 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 PLA2G12AQ9BZM1 189 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 ACTR3CQ9C0K3 210 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 FGF20Q9NP95 211 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 ZNF355PQ9NSJ1 428 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 NKX6-3A6NJ46 265 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 SSSCA1O60232 199 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 FABP1P07148 127 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 FKBP2P26885 142 aaKnown RBP11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 SOX7Q9BT81 388 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 AUNIPQ9H7T9 357 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 LOC285556D6RIA3 1793 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 hCG_1809904A0A1W2PP81 198 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 A0A1W2PPE2 198 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 A0A1W2PR64 198 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 A0A1W2PRV1 198 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 LILRA5A6NI73 299 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 RFPL4AA6NLU0 287 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 LMO7DNF2Z398 122 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 RFPL4AL1F8VTS6 287 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 TMEM127O75204 238 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 ALOX12BO75342 701 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 RD3LP0DJH9 198 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 GLB1P16278 677 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 RAC1P63000 192 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 HSF1Q00613 529 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 SSBP1Q04837 148 aaKnown RBP11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 ZNF385BQ569K4 471 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 ZNF787Q6DD87 383 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 CLEC9AQ6UXN8 241 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 TMEM179BQ7Z7N9 219 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 KMT5CQ86Y97 462 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 ZNF485Q8NCK3 441 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 MVB12AQ96EY5 273 aa11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 GAR1Q9NY12 217 aaKnown RBP11.13□□□□□ -0.63
NPLOC4-202ENST00000374747 TMEM265A0A087WTH1 108 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 SUB1P53999 127 aaKnown RBP eCLIP11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 SELENBP1Q13228 472 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 EDDM3AQ14507 147 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 OR8B8Q15620 311 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 PRTGQ2VWP7 1150 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 TIGITQ495A1 244 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 SPANXN5Q5MJ07 72 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 TCTN3Q6NUS6 607 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 STAC2Q6ZMT1 411 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms