RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 SLIRPQ9GZT3 109 aaKnown RBP7.06□□□□□ -1.28
USP48-203ENST00000374732 RBFOX1Q9NWB1 397 aaKnown RBP7.06□□□□□ -1.28
USP48-203ENST00000374732 ARMCX1Q9P291 453 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 OR5H15A6NDH6 313 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 OR5H1A6NKK0 313 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 A8MVM7 634 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 TMPRSS2O15393 492 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 TYROBPO43914 113 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 SLC16A7O60669 478 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 ALOX12BO75342 701 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 SMIM10L2AP0DMW4 78 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 SMIM10L2BP0DMW5 78 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 POLR2IP36954 125 aaKnown RBP7.05□□□□□ -1.28
USP48-203ENST00000374732 UCP3P55916 312 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 KHDC3LQ587J8 217 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 TCTN3Q6NUS6 607 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 SLC23A3Q6PIS1 610 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 PARS2Q7L3T8 475 aaKnown RBP7.05□□□□□ -1.28
USP48-203ENST00000374732 LAPTM4BQ86VI4 370 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 RIMKLAQ8IXN7 391 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 KLHDC8BQ8IXV7 354 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 BMPERQ8N8U9 685 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 ZFP41Q8N8Y5 198 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 CASTOR1Q8WTX7 329 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 FBLIM1Q8WUP2 373 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 SUSD6Q92537 303 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 ZC3HAV1LQ96H79 300 aaKnown RBP7.05□□□□□ -1.28
USP48-203ENST00000374732 HSH2DQ96JZ2 352 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 JSRP1Q96MG2 331 aaPredicted RBP7.05□□□□□ -1.28
USP48-203ENST00000374732 MRPL45Q9BRJ2 306 aaKnown RBP7.05□□□□□ -1.28
USP48-203ENST00000374732 IL23AQ9NPF7 189 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 ELOVL5Q9NYP7 299 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 CLEC1BQ9P126 229 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 TMEFF2Q9UIK5 374 aaPredicted RBP7.05□□□□□ -1.28
USP48-203ENST00000374732 POMPQ9Y244 141 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.05□□□□□ -1.28
USP48-203ENST00000374732 A0A0U1RQF3 1178 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 B4DXG7 233 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 G3V4G9 280 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 HSD17B6O14756 317 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 MPZL2O60487 215 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 MT-ND4LP03901 98 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 TBC1D3HP0C7X1 549 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 ESDP10768 282 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 ATP1B2P14415 290 aaPredicted RBP7.05□□□□□ -1.28
USP48-203ENST00000374732 SHC1P29353 583 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 PTGER1P34995 402 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 ACLYP53396 1101 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 FAM3BP58499 235 aaPredicted RBP7.05□□□□□ -1.28
USP48-203ENST00000374732 SYTL3Q4VX76 610 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 C12orf54Q6X4T0 127 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 STHQ8IWL8 128 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 LAX1Q8IWV1 398 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 MRPL41Q8IXM3 137 aaKnown RBP7.05□□□□□ -1.28
USP48-203ENST00000374732 TTC9BQ8N6N2 239 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 RCHY1Q96PM5 261 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 SPAG8Q99932 426 aaPredicted RBP7.05□□□□□ -1.28
USP48-203ENST00000374732 ABHD14AQ9BUJ0 271 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 PIGMQ9H3S5 423 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 GKN1Q9NS71 199 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 HSPB8Q9UJY1 196 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 ST3GAL6Q9Y274 331 aa7.05□□□□□ -1.28
USP48-203ENST00000374732 TRAPPC13A5PLN9 417 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 ZNF814B7Z6K7 855 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 NDUFB8O95169 186 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 MPIG6BO95866 241 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 IFNA1P01562 189 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 GIPP09681 153 aaPredicted RBP7.04□□□□□ -1.28
USP48-203ENST00000374732 FABP4P15090 132 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 NFYBP25208 207 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 DYNLT1P63172 113 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 PLCXD2Q0VAA5 305 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 MALLQ13021 153 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 JOSD1Q15040 202 aaPredicted RBP7.04□□□□□ -1.28
USP48-203ENST00000374732 ELOA3BQ3SY89 546 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 TMEM196Q5HYL7 178 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 PRR31Q5SQ13 230 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 STRADAQ7RTN6 431 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 TSEN54Q7Z6J9 526 aaKnown RBP7.04□□□□□ -1.28
USP48-203ENST00000374732 LRRTM1Q86UE6 522 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 BPIFB2Q8N4F0 458 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 CBR4Q8N4T8 237 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 ELOA3Q8NG57 546 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 SFXN5Q8TD22 340 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 MZB1Q8WU39 189 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 SNRNP40Q96DI7 357 aaKnown RBP7.04□□□□□ -1.28
USP48-203ENST00000374732 COQ2Q96H96 371 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 CDKN2AIPNLQ96HQ2 116 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 METRNQ9UJH8 293 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 TRIP11Q15643 1979 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 A0A1B0GW55 424 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 MBD3L4A6NDZ8 208 aaPredicted RBP7.04□□□□□ -1.28
USP48-203ENST00000374732 MBD3L3A6NE82 208 aaPredicted RBP7.04□□□□□ -1.28
USP48-203ENST00000374732 MBD3L5A6NJ08 208 aaPredicted RBP7.04□□□□□ -1.28
USP48-203ENST00000374732 RFXAPO00287 272 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 SLC17A3O00476 420 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 GLUD1P00367 558 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 DUX4L2P0CJ85 424 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 DUX4L3P0CJ86 424 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 DUX4L5P0CJ88 424 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms