RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 NANOGNBQ7Z5D8 188 aa9.74□□□□□ -0.85
HDAC8-204ENST00000373560 DTX3Q8N9I9 347 aa9.74□□□□□ -0.85
HDAC8-204ENST00000373560 C16orf45Q96MC5 204 aaPredicted RBP9.74□□□□□ -0.85
HDAC8-204ENST00000373560 CPPED1Q9BRF8 314 aaPredicted RBP9.74□□□□□ -0.85
HDAC8-204ENST00000373560 METTL8Q9H825 291 aaKnown RBP9.74□□□□□ -0.85
HDAC8-204ENST00000373560 POLE4Q9NR33 117 aa9.74□□□□□ -0.85
HDAC8-204ENST00000373560 SCOCQ9UIL1 159 aa9.74□□□□□ -0.85
HDAC8-204ENST00000373560 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.73□□□□□ -0.85
HDAC8-204ENST00000373560 A0A1W2PRG6 482 aa9.73□□□□□ -0.85
HDAC8-204ENST00000373560 OR6C6A6NF89 314 aa9.73□□□□□ -0.85
HDAC8-204ENST00000373560 CENPBD1B2RD01 187 aa9.73□□□□□ -0.85
HDAC8-204ENST00000373560 TRIM13O60858 407 aa9.73□□□□□ -0.85
HDAC8-204ENST00000373560 PTBP3O95758 552 aaKnown RBP9.73□□□□□ -0.85
HDAC8-204ENST00000373560 UMPSP11172 480 aa9.73□□□□□ -0.85
HDAC8-204ENST00000373560 MSR1P21757 451 aa9.73□□□□□ -0.85
HDAC8-204ENST00000373560 CA6P23280 308 aa9.73□□□□□ -0.85
HDAC8-204ENST00000373560 ALDH3A1P30838 453 aa9.73□□□□□ -0.85
HDAC8-204ENST00000373560 PRKAR1BP31321 381 aa9.73□□□□□ -0.85
HDAC8-204ENST00000373560 VEGFCP49767 419 aa9.73□□□□□ -0.85
HDAC8-204ENST00000373560 RGS8P57771 180 aaPredicted RBP9.73□□□□□ -0.85
HDAC8-204ENST00000373560 PCBD1P61457 104 aa9.73□□□□□ -0.85
HDAC8-204ENST00000373560 NCALDP61601 193 aa9.73□□□□□ -0.85
HDAC8-204ENST00000373560 TOP3AQ13472 1001 aaPredicted RBP9.73□□□□□ -0.85
HDAC8-204ENST00000373560 MKXQ8IYA7 352 aa9.73□□□□□ -0.85
HDAC8-204ENST00000373560 TRIML2Q8N7C3 387 aa9.73□□□□□ -0.85
HDAC8-204ENST00000373560 TCP10LQ8TDR4 215 aa9.73□□□□□ -0.85
HDAC8-204ENST00000373560 LINC00476Q8WZB0 136 aa9.73□□□□□ -0.85
HDAC8-204ENST00000373560 NUF2Q9BZD4 464 aa9.73□□□□□ -0.85
HDAC8-204ENST00000373560 TMEM27Q9HBJ8 222 aa9.73□□□□□ -0.85
HDAC8-204ENST00000373560 SELENONQ9NZV5 590 aa9.73□□□□□ -0.85
HDAC8-204ENST00000373560 ZNF229Q9UJW7 825 aa9.73□□□□□ -0.85
HDAC8-204ENST00000373560 SF3B6Q9Y3B4 125 aaKnown RBP9.73□□□□□ -0.85
HDAC8-204ENST00000373560 VGLL3A8MV65 326 aa9.72□□□□□ -0.85
HDAC8-204ENST00000373560 M0R1W7 72 aa9.72□□□□□ -0.85
HDAC8-204ENST00000373560 M0R3H8 397 aa9.72□□□□□ -0.85
HDAC8-204ENST00000373560 F2RL2O00254 374 aa9.72□□□□□ -0.85
HDAC8-204ENST00000373560 FMO6PO60774 539 aa9.72□□□□□ -0.85
HDAC8-204ENST00000373560 FUT1P19526 365 aa9.72□□□□□ -0.85
HDAC8-204ENST00000373560 COX7A1P24310 79 aa9.72□□□□□ -0.85
HDAC8-204ENST00000373560 CEBPDP49716 269 aaPredicted RBP9.72□□□□□ -0.85
HDAC8-204ENST00000373560 UFM1P61960 85 aa9.72□□□□□ -0.85
HDAC8-204ENST00000373560 MAD2L1Q13257 205 aaPredicted RBP9.72□□□□□ -0.85
HDAC8-204ENST00000373560 CCDC92Q53HC0 331 aaPredicted RBP9.72□□□□□ -0.85
HDAC8-204ENST00000373560 DHRS4L2Q6PKH6 230 aa9.72□□□□□ -0.85
HDAC8-204ENST00000373560 PCYOX1LQ8NBM8 494 aa9.72□□□□□ -0.85
HDAC8-204ENST00000373560 OR4X2Q8NGF9 303 aa9.72□□□□□ -0.85
HDAC8-204ENST00000373560 RASD2Q96D21 266 aa9.72□□□□□ -0.85
HDAC8-204ENST00000373560 DUS3LQ96G46 650 aaKnown RBP9.72□□□□□ -0.85
HDAC8-204ENST00000373560 ZNF583Q96ND8 569 aa9.72□□□□□ -0.85
HDAC8-204ENST00000373560 FANCD2OSQ96PS1 177 aa9.72□□□□□ -0.85
HDAC8-204ENST00000373560 TM2D3Q9BRN9 247 aa9.72□□□□□ -0.85
HDAC8-204ENST00000373560 ADAT1Q9BUB4 502 aaKnown RBP9.72□□□□□ -0.85
HDAC8-204ENST00000373560 ZMAT4Q9H898 229 aa9.72□□□□□ -0.85
HDAC8-204ENST00000373560 CACYBPQ9HB71 228 aaKnown RBP9.72□□□□□ -0.85
HDAC8-204ENST00000373560 BCL2L10Q9HD36 194 aa9.72□□□□□ -0.85
HDAC8-204ENST00000373560 SSU72Q9NP77 194 aaKnown RBP9.72□□□□□ -0.85
HDAC8-204ENST00000373560 MEPEQ9NQ76 525 aaPredicted RBP9.72□□□□□ -0.85
HDAC8-204ENST00000373560 NDUFAF1Q9Y375 327 aa9.72□□□□□ -0.85
HDAC8-204ENST00000373560 hCG_1807616A0A1W2PRN6 198 aa9.71□□□□□ -0.86
HDAC8-204ENST00000373560 CPSF4LA6NMK7 179 aaKnown RBP9.71□□□□□ -0.86
HDAC8-204ENST00000373560 C12orf71A8MTZ7 269 aa9.71□□□□□ -0.86
HDAC8-204ENST00000373560 H7C1C5 153 aa9.71□□□□□ -0.86
HDAC8-204ENST00000373560 KRT75O95678 551 aa9.71□□□□□ -0.86
HDAC8-204ENST00000373560 GRPP07492 148 aa9.71□□□□□ -0.86
HDAC8-204ENST00000373560 DAP3P51398 398 aaKnown RBP9.71□□□□□ -0.86
HDAC8-204ENST00000373560 RAB25P57735 213 aa9.71□□□□□ -0.86
HDAC8-204ENST00000373560 LCN6P62502 163 aa9.71□□□□□ -0.86
HDAC8-204ENST00000373560 RPL23AP62750 156 aaKnown RBP9.71□□□□□ -0.86
HDAC8-204ENST00000373560 OR8G1Q15617 311 aa9.71□□□□□ -0.86
HDAC8-204ENST00000373560 RABL3Q5HYI8 236 aa9.71□□□□□ -0.86
HDAC8-204ENST00000373560 WDR86Q86TI4 376 aa9.71□□□□□ -0.86
HDAC8-204ENST00000373560 OR51D1Q8NGF3 324 aa9.71□□□□□ -0.86
HDAC8-204ENST00000373560 OR5T2Q8NGG2 359 aa9.71□□□□□ -0.86
HDAC8-204ENST00000373560 BBS10Q8TAM1 723 aa9.71□□□□□ -0.86
HDAC8-204ENST00000373560 COG8Q96MW5 612 aa9.71□□□□□ -0.86
HDAC8-204ENST00000373560 RMND5AQ9H871 391 aa9.71□□□□□ -0.86
HDAC8-204ENST00000373560 INIPQ9NRY2 104 aa9.71□□□□□ -0.86
HDAC8-204ENST00000373560 ZMAT5Q9UDW3 170 aaKnown RBP9.71□□□□□ -0.86
HDAC8-204ENST00000373560 ZNF256Q9Y2P7 627 aaPredicted RBP9.71□□□□□ -0.86
HDAC8-204ENST00000373560 PKHD1P08F94 4074 aa9.71□□□□□ -0.86
HDAC8-204ENST00000373560 DYNC1H1Q14204 4646 aaKnown RBP9.7□□□□□ -0.86
HDAC8-204ENST00000373560 A0A1W2PQ09 198 aa9.7□□□□□ -0.86
HDAC8-204ENST00000373560 A6NLC8 198 aa9.7□□□□□ -0.86
HDAC8-204ENST00000373560 PRR23D1E9PI22 279 aaPredicted RBP9.7□□□□□ -0.86
HDAC8-204ENST00000373560 NDUFB3O43676 98 aa9.7□□□□□ -0.86
HDAC8-204ENST00000373560 CHP2O43745 196 aa9.7□□□□□ -0.86
HDAC8-204ENST00000373560 LY86O95711 162 aa9.7□□□□□ -0.86
HDAC8-204ENST00000373560 LPLP06858 475 aa9.7□□□□□ -0.86
HDAC8-204ENST00000373560 ALDOCP09972 364 aaKnown RBP9.7□□□□□ -0.86
HDAC8-204ENST00000373560 FAM153BP0C7A2 387 aa9.7□□□□□ -0.86
HDAC8-204ENST00000373560 PRR23D2P0DMB1 279 aaPredicted RBP9.7□□□□□ -0.86
HDAC8-204ENST00000373560 MYF6P23409 242 aa9.7□□□□□ -0.86
HDAC8-204ENST00000373560 TGM4P49221 684 aa9.7□□□□□ -0.86
HDAC8-204ENST00000373560 ECH1Q13011 328 aa9.7□□□□□ -0.86
HDAC8-204ENST00000373560 GK2Q14410 553 aaPredicted RBP9.7□□□□□ -0.86
HDAC8-204ENST00000373560 DGUOKQ16854 277 aa9.7□□□□□ -0.86
HDAC8-204ENST00000373560 ZNF572Q7Z3I7 529 aaPredicted RBP9.7□□□□□ -0.86
HDAC8-204ENST00000373560 OR2W3Q7Z3T1 314 aa9.7□□□□□ -0.86
HDAC8-204ENST00000373560 C11orf53Q8IXP5 236 aa9.7□□□□□ -0.86
HDAC8-204ENST00000373560 OR52H1Q8NGJ2 320 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 416.4 ms