RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 SCO1O75880 301 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 MMP15P51511 669 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 TMEM88Q6PEY1 159 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 ZNF813Q6ZN06 617 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 LHX4Q969G2 390 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 ADIPOR1Q96A54 375 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 PARP12Q9H0J9 701 aaKnown RBP12.89□□□□□ -0.35
LMX1B-202ENST00000373474 ABOP16442 354 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 SULT1A2P50226 295 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 HTRA3P83110 453 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 THEM4Q5T1C6 240 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 UBAC2Q8NBM4 344 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 C6orf106Q9H6K1 298 aaPredicted RBP12.89□□□□□ -0.35
LMX1B-202ENST00000373474 SIRT5Q9NXA8 310 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 LAMP3Q9UQV4 416 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 R4GMQ9 66 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 C4orf47A7E2U8 309 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 ZNF354AO60765 605 aaPredicted RBP12.89□□□□□ -0.35
LMX1B-202ENST00000373474 MYOGP15173 224 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 MEOX2P50222 304 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 MFSD4AQ8N468 514 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 OR5M1Q8NGP8 315 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 AUNIPQ9H7T9 357 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 UCK1Q9HA47 277 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 IL21Q9HBE4 155 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 TIMM8AO60220 97 aaPredicted RBP12.89□□□□□ -0.35
LMX1B-202ENST00000373474 ABHD16AO95870 558 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 SCGB1C2P0DMR2 95 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 GPR85P60893 370 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 BHLHA9Q7RTU4 235 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 C2orf50Q96LR7 162 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 BET1LQ9NYM9 111 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 CACFD1Q9UGQ2 172 aa12.89□□□□□ -0.35
LMX1B-202ENST00000373474 PRSS37A4D1T9 235 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 CLEC3BP05452 202 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 FABP4P15090 132 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 KIR2DL3P43628 341 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 RAB13P51153 203 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 FAAP20Q6NZ36 180 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 TOMM20LQ6UXN7 152 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 MSRB3Q8IXL7 192 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 MAML2Q8IZL2 1156 aaPredicted RBP12.88□□□□□ -0.35
LMX1B-202ENST00000373474 SIRT6Q8N6T7 355 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 RBM38Q9H0Z9 239 aaKnown RBP12.88□□□□□ -0.35
LMX1B-202ENST00000373474 IGHV3-20A0A0C4DH32 117 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 ZNF816-ZNF321PA0A0X1KG74 233 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 CXCL10P02778 98 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 COX5AP20674 150 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 WNT3P56703 355 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 ANKRD16Q6P6B7 361 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 ZNF321PQ8N8H1 164 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 MORN4Q8NDC4 146 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 CNRIP1Q96F85 164 aaPredicted RBP12.88□□□□□ -0.35
LMX1B-202ENST00000373474 PLA2G12AQ9BZM1 189 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 SHARPINQ9H0F6 387 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 CDCP1Q9H5V8 836 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 FBXO34Q9NWN3 711 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 AKR7A2O43488 359 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 AQP8O94778 261 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 PLAC9Q5JTB6 97 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 OR2AK2Q8NG84 335 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 OR10D4PQ8NGN7 298 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 OR2A1Q8NGT9 310 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 RPUSD4Q96CM3 377 aaKnown RBP12.88□□□□□ -0.35
LMX1B-202ENST00000373474 RHOFQ9HBH0 211 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 POM121BA6NF01 834 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 GPR31O00270 319 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 ZNF207O43670 478 aaKnown RBP12.88□□□□□ -0.35
LMX1B-202ENST00000373474 NXPH3O95157 252 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 EPXP11678 715 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 PPP1CBP62140 327 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 KCNAB1Q14722 419 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 SLC25A35Q3KQZ1 300 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 LCN15Q6UWW0 184 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 ZFP62Q8NB50 900 aaPredicted RBP12.88□□□□□ -0.35
LMX1B-202ENST00000373474 RXFP4Q8TDU9 374 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 LIPHQ8WWY8 451 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 EMG1Q92979 244 aaKnown RBP12.88□□□□□ -0.35
LMX1B-202ENST00000373474 CMTM3Q96MX0 182 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 GPR173Q9NS66 373 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 M0R143 59 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 OR4E1P0C645 316 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 THNSL2Q86YJ6 484 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 RELL2Q8NC24 303 aaPredicted RBP12.88□□□□□ -0.35
LMX1B-202ENST00000373474 FAM71CQ8NEG0 241 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 OR4D10Q8NGI6 311 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 C16orf52Q8NHV5 167 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 JAM3Q9BX67 310 aa12.88□□□□□ -0.35
LMX1B-202ENST00000373474 A0A1W2PPQ1 181 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 HSBP1O75506 76 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 GLB1P16278 677 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 KCNJ3P48549 501 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 TMEM81Q6P7N7 255 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 OR10J5Q8NHC4 309 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 KCND3Q9UK17 655 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 SERTM2A0A1B0GWG4 89 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 BTG2P78543 158 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 SELENBP1Q13228 472 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 LTC4SQ16873 150 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 PLXDC2Q6UX71 529 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms