RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 A6NLC8 198 aa12.23□□□□□ -0.45
USP49-201ENST00000373006 C17orf105B2RV13 164 aa12.23□□□□□ -0.45
USP49-201ENST00000373006 STMND1H3BQB6 276 aa12.23□□□□□ -0.45
USP49-201ENST00000373006 S100PP25815 95 aa12.23□□□□□ -0.45
USP49-201ENST00000373006 NR0B1P51843 470 aaKnown RBP12.23□□□□□ -0.45
USP49-201ENST00000373006 RPL27P61353 136 aaKnown RBP12.23□□□□□ -0.45
USP49-201ENST00000373006 ZNF117Q03924 483 aa12.23□□□□□ -0.45
USP49-201ENST00000373006 FUT7Q11130 342 aa12.23□□□□□ -0.45
USP49-201ENST00000373006 HABP2Q14520 560 aaPredicted RBP12.23□□□□□ -0.45
USP49-201ENST00000373006 Q3ZCU0 254 aa12.23□□□□□ -0.45
USP49-201ENST00000373006 PARM1Q6UWI2 310 aa12.23□□□□□ -0.45
USP49-201ENST00000373006 RNF144BQ7Z419 303 aa12.23□□□□□ -0.45
USP49-201ENST00000373006 ZDHHC22Q8N966 263 aa12.23□□□□□ -0.45
USP49-201ENST00000373006 SLC37A2Q8TED4 501 aa12.23□□□□□ -0.45
USP49-201ENST00000373006 OR8D2Q9GZM6 311 aa12.23□□□□□ -0.45
USP49-201ENST00000373006 RCC2Q9P258 522 aaKnown RBP12.23□□□□□ -0.45
USP49-201ENST00000373006 IGLV1-36A0A0B4J1U3 117 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 IFNA4P05014 189 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 SFTA3P0C7M3 94 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 HLA-DOBP13765 273 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 ROM1Q03395 351 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 ZNF124Q15973 351 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 C1orf53Q5VUE5 145 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 DCXRQ7Z4W1 244 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 OR51F2Q8NH61 342 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 SGK3Q96BR1 496 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 NICN1Q9BSH3 213 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 SUCNR1Q9BXA5 334 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 GSKIPQ9P0R6 139 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 LPAR3Q9UBY5 353 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 OR52A1Q9UKL2 312 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 TMEM184BQ9Y519 407 aaPredicted RBP12.22□□□□□ -0.45
USP49-201ENST00000373006 HSPB2A8KAH6 182 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 C9JQL5 133 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 BGLAPP02818 100 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 IFI6P09912 130 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 NME2P22392 152 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 CD80P33681 288 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 KIR2DL1P43626 348 aaPredicted RBP12.22□□□□□ -0.45
USP49-201ENST00000373006 FMODQ06828 376 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 HSPB2Q16082 182 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 DMRTC1Q5HYR2 192 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 COX15Q7KZN9 410 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 OR52N5Q8NH56 324 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 OR11A1Q9GZK7 315 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 CRISPLD2Q9H0B8 497 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 MEGF11A6BM72 1044 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 CXorf65A6NEN9 183 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 COLCA2A8K830 154 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 LRP3O75074 770 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 HOXB2P14652 356 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 CCINQ13939 588 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 PGAP1Q75T13 922 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 OR4K15Q8NH41 348 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 RAB22AQ9UL26 194 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 SLC5A6Q9Y289 635 aa12.22□□□□□ -0.45
USP49-201ENST00000373006 DBX1A6NMT0 343 aa12.21□□□□□ -0.45
USP49-201ENST00000373006 RNASEK-C17orf49H0YIS7 233 aa12.21□□□□□ -0.45
USP49-201ENST00000373006 ST8SIA5O15466 376 aa12.21□□□□□ -0.45
USP49-201ENST00000373006 FBXO24O75426 580 aa12.21□□□□□ -0.45
USP49-201ENST00000373006 YIF1AO95070 293 aa12.21□□□□□ -0.45
USP49-201ENST00000373006 CLPSP04118 112 aa12.21□□□□□ -0.45
USP49-201ENST00000373006 VSIG8P0DPA2 414 aa12.21□□□□□ -0.45
USP49-201ENST00000373006 RCC1P18754 421 aaPredicted RBP12.21□□□□□ -0.45
USP49-201ENST00000373006 CD1CP29017 333 aa12.21□□□□□ -0.45
USP49-201ENST00000373006 LPAR6P43657 344 aa12.21□□□□□ -0.45
USP49-201ENST00000373006 CEBPGP53567 150 aa12.21□□□□□ -0.45
USP49-201ENST00000373006 LAT2Q9GZY6 243 aa12.21□□□□□ -0.45
USP49-201ENST00000373006 G6PC2Q9NQR9 355 aa12.21□□□□□ -0.45
USP49-201ENST00000373006 PCDHGA1Q9Y5H4 931 aa12.21□□□□□ -0.45
USP49-201ENST00000373006 CABIN1Q9Y6J0 2220 aa12.21□□□□□ -0.45
USP49-201ENST00000373006 SMIM6P0DI80 62 aa12.21□□□□□ -0.46
USP49-201ENST00000373006 FSTP19883 344 aa12.21□□□□□ -0.46
USP49-201ENST00000373006 F2RL1P55085 397 aa12.21□□□□□ -0.46
USP49-201ENST00000373006 C1orf100Q5SVJ3 147 aa12.21□□□□□ -0.46
USP49-201ENST00000373006 MAMDC2Q7Z304 686 aaPredicted RBP12.21□□□□□ -0.46
USP49-201ENST00000373006 ADAM19Q9H013 955 aa12.21□□□□□ -0.46
USP49-201ENST00000373006 OR51M1Q9H341 326 aa12.21□□□□□ -0.46
USP49-201ENST00000373006 ZNF107Q9UII5 783 aaPredicted RBP12.21□□□□□ -0.46
USP49-201ENST00000373006 R4GMQ9 66 aa12.21□□□□□ -0.46
USP49-201ENST00000373006 PCNX3Q9H6A9 2034 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 A0A0A6YYH2 397 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 PMS2P1A4D2B8 440 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 A6NJ64 397 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 GPR37O15354 613 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 CLN5O75503 358 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 MED6O75586 246 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 ARG1P05089 322 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 ABCD3P28288 659 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 GLO1Q04760 184 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 EBPQ15125 230 aaKnown RBP12.2□□□□□ -0.46
USP49-201ENST00000373006 RPL7L1Q6DKI1 246 aaKnown RBP12.2□□□□□ -0.46
USP49-201ENST00000373006 ARMC6Q6NXE6 501 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 ARHGEF39Q8N4T4 335 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 DMBX1Q8NFW5 382 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 OR10C1Q96KK4 312 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 CCNL2Q96S94 520 aaPredicted RBP12.2□□□□□ -0.46
USP49-201ENST00000373006 FOXQ1Q9C009 403 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 S1PR5Q9H228 398 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 METTL8Q9H825 291 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms