RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 ABCD3P28288 659 aa14.57□□□□□ -0.08
SDC4-201ENST00000372733 EMP2P54851 167 aa14.57□□□□□ -0.08
SDC4-201ENST00000372733 DCDP81605 110 aaKnown RBP14.57□□□□□ -0.08
SDC4-201ENST00000372733 ZNF585AQ6P3V2 769 aa14.57□□□□□ -0.08
SDC4-201ENST00000372733 GRINAQ7Z429 371 aa14.57□□□□□ -0.08
SDC4-201ENST00000372733 ZNF101Q8IZC7 436 aa14.57□□□□□ -0.08
SDC4-201ENST00000372733 CMSS1Q9BQ75 279 aaKnown RBP14.57□□□□□ -0.08
SDC4-201ENST00000372733 NPIPA1Q9UND3 350 aa14.57□□□□□ -0.08
SDC4-201ENST00000372733 RP1P56715 2156 aa14.57□□□□□ -0.08
SDC4-201ENST00000372733 IGKV3D-11A0A0A0MRZ8 115 aa14.57□□□□□ -0.08
SDC4-201ENST00000372733 A0A1W2PQD3 144 aa14.57□□□□□ -0.08
SDC4-201ENST00000372733 FTCDNL1E5RQL4 147 aa14.57□□□□□ -0.08
SDC4-201ENST00000372733 SPP1P10451 314 aa14.57□□□□□ -0.08
SDC4-201ENST00000372733 CX3CR1P49238 355 aa14.57□□□□□ -0.08
SDC4-201ENST00000372733 NAAAQ02083 359 aa14.57□□□□□ -0.08
SDC4-201ENST00000372733 PNLIPRP3Q17RR3 467 aa14.57□□□□□ -0.08
SDC4-201ENST00000372733 ZFP82Q8N141 532 aa14.57□□□□□ -0.08
SDC4-201ENST00000372733 TMEM104Q8NE00 496 aa14.57□□□□□ -0.08
SDC4-201ENST00000372733 ARL5BQ96KC2 179 aa14.57□□□□□ -0.08
SDC4-201ENST00000372733 USB1Q9BQ65 265 aaKnown RBP14.57□□□□□ -0.08
SDC4-201ENST00000372733 WWTR1Q9GZV5 400 aa14.57□□□□□ -0.08
SDC4-201ENST00000372733 HRH4Q9H3N8 390 aa14.57□□□□□ -0.08
SDC4-201ENST00000372733 C5orf66Q9H5L9 145 aa14.57□□□□□ -0.08
SDC4-201ENST00000372733 UQCC1Q9NVA1 299 aa14.57□□□□□ -0.08
SDC4-201ENST00000372733 SNAPINO95295 136 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 TAS2R31P59538 309 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 POU3F1Q03052 451 aaPredicted RBP14.56□□□□□ -0.08
SDC4-201ENST00000372733 ANGPTL5Q86XS5 388 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 DTWD2Q8NBA8 298 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 OR51F2Q8NH61 342 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 RNF133Q8WVZ7 376 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 COA4Q9NYJ1 87 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 C2orf72A6NCS6 295 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 MS4A18H0YCH9 400 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 TBPP20226 339 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 MMP16P51512 607 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 CLDN6P56747 220 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 B2MP61769 119 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 PJVKQ0ZLH3 352 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 PCK2Q16822 640 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 MS4A18Q3C1V0 323 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.56□□□□□ -0.08
SDC4-201ENST00000372733 DNM1P34Q6PK57 102 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 SLAMF6Q96DU3 332 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 PBOV1Q9GZY1 135 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 ACKR4Q9NPB9 350 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 CUTCQ9NTM9 273 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 ZFP57Q9NU63 452 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 LPAR3Q9UBY5 353 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 CYP8B1Q9UNU6 501 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 MMACHCQ9Y4U1 282 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 PIAS3Q9Y6X2 628 aa14.56□□□□□ -0.08
SDC4-201ENST00000372733 THADAQ6YHU6 1953 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 TMEM14DPA8MWL7 114 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 MPIG6BO95866 241 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 MUC1P15941 1255 aaPredicted RBP14.55□□□□□ -0.08
SDC4-201ENST00000372733 BCKDHBP21953 392 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 KCNJ3P48549 501 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 TDGQ13569 410 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 ELAVL1Q15717 326 aaKnown RBP14.55□□□□□ -0.08
SDC4-201ENST00000372733 GFOD2Q3B7J2 385 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 TMEM128Q5BJH2 165 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 PLAC9Q5JTB6 97 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 CLEC18BQ6UXF7 455 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 ZNF248Q8NDW4 579 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 TERB2Q8NHR7 220 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 RXFP4Q8TDU9 374 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 KCNK17Q96T54 332 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 LPAR5Q9H1C0 372 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 PDE7BQ9NP56 450 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 A0A1W2PP11 408 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 A6NIZ1 184 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 SOCS1O15524 211 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 CRYBA1P05813 215 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 ZNF93P35789 620 aaPredicted RBP14.55□□□□□ -0.08
SDC4-201ENST00000372733 RAP1BP61224 184 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 RAP1AP62834 184 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 C16orf47Q6ZP98 133 aaPredicted RBP14.55□□□□□ -0.08
SDC4-201ENST00000372733 OR10S1Q8NGN2 331 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 C11orf40Q8WZ69 217 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 NRIP2Q9BQI9 281 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 UQCC2Q9BRT2 126 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 SOX7Q9BT81 388 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 EMC6Q9BV81 110 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 SEC11CQ9BY50 192 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 SLC7A5P2Q9GIP4 190 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 BANF2Q9H503 90 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 BIN3Q9NQY0 253 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 FLVCR1Q9Y5Y0 555 aa14.55□□□□□ -0.08
SDC4-201ENST00000372733 MYO15AQ9UKN7 3530 aa14.54□□□□□ -0.08
SDC4-201ENST00000372733 EPOPA6NHQ4 379 aa14.54□□□□□ -0.08
SDC4-201ENST00000372733 RAD51DO75771 328 aa14.54□□□□□ -0.08
SDC4-201ENST00000372733 ABOP16442 354 aa14.54□□□□□ -0.08
SDC4-201ENST00000372733 CBX5P45973 191 aa14.54□□□□□ -0.08
SDC4-201ENST00000372733 CYCSP99999 105 aaKnown RBP14.54□□□□□ -0.08
SDC4-201ENST00000372733 PDZK1IP1Q13113 114 aa14.54□□□□□ -0.08
SDC4-201ENST00000372733 ANKRD55Q3KP44 614 aa14.54□□□□□ -0.08
SDC4-201ENST00000372733 OR51E1Q8TCB6 317 aa14.54□□□□□ -0.08
SDC4-201ENST00000372733 TMEM41AQ96HV5 264 aa14.54□□□□□ -0.08
SDC4-201ENST00000372733 FOXL2P58012 376 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms