RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 C1orf147Q96MC9 270 aaPredicted RBP10.39□□□□□ -0.75
SMARCA1-201ENST00000371121 VSTM2LQ96N03 204 aa10.39□□□□□ -0.75
SMARCA1-201ENST00000371121 PIGQQ9BRB3 760 aa10.39□□□□□ -0.75
SMARCA1-201ENST00000371121 LMF2Q9BU23 707 aaKnown RBP10.39□□□□□ -0.75
SMARCA1-201ENST00000371121 ARID1AO14497 2285 aa10.39□□□□□ -0.75
SMARCA1-201ENST00000371121 MSTNO14793 375 aa10.39□□□□□ -0.75
SMARCA1-201ENST00000371121 CT45A8P0DMV1 189 aa10.39□□□□□ -0.75
SMARCA1-201ENST00000371121 CT45A9P0DMV2 189 aa10.39□□□□□ -0.75
SMARCA1-201ENST00000371121 VSIG8P0DPA2 414 aa10.39□□□□□ -0.75
SMARCA1-201ENST00000371121 NPY4RP50391 375 aa10.39□□□□□ -0.75
SMARCA1-201ENST00000371121 GPR18Q14330 331 aa10.39□□□□□ -0.75
SMARCA1-201ENST00000371121 C2orf27AQ580R0 203 aa10.39□□□□□ -0.75
SMARCA1-201ENST00000371121 CT45A2Q5DJT8 189 aa10.39□□□□□ -0.75
SMARCA1-201ENST00000371121 Q8WTZ3 238 aa10.39□□□□□ -0.75
SMARCA1-201ENST00000371121 FAM46BQ96A09 425 aa10.39□□□□□ -0.75
SMARCA1-201ENST00000371121 SPACA7Q96KW9 195 aa10.39□□□□□ -0.75
SMARCA1-201ENST00000371121 SERINC2Q96SA4 455 aa10.39□□□□□ -0.75
SMARCA1-201ENST00000371121 SH3BGRL3Q9H299 93 aa10.39□□□□□ -0.75
SMARCA1-201ENST00000371121 RNF186Q9NXI6 227 aa10.39□□□□□ -0.75
SMARCA1-201ENST00000371121 PISDQ9UG56 409 aa10.39□□□□□ -0.75
SMARCA1-201ENST00000371121 METTL12A8MUP2 240 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 SFT2D2O95562 160 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 C8AP07357 584 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 PRPS1P60891 318 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 ROM1Q03395 351 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 TCEA2Q15560 299 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 HAGHQ16775 308 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 HNRNPA1L2Q32P51 320 aaKnown RBP10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 TMEM128Q5BJH2 165 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 ALG10Q5BKT4 473 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 C1QL3Q5VWW1 255 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 AWAT2Q6E213 333 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 HIST3H2BBQ8N257 126 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 TMEM156Q8N614 296 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 OR56B1Q8NGI3 324 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 RARRES2Q99969 163 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 OPA3Q9H6K4 179 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 RAB18Q9NP72 206 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 LRP12Q9Y561 859 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 TERTO14746 1132 aaKnown RBP10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 NME2P1O60361 137 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 PRNPP04156 253 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 CD2P06729 351 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 LINC00271P0C7V0 271 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 RBP2P50120 134 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 ADAM8P78325 824 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 INSM1Q01101 510 aaPredicted RBP10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 KHDC3LQ587J8 217 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 MTSS1LQ765P7 747 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 LHFPL1Q86WI0 220 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 PTX4Q96A99 478 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 GALNT14Q96FL9 552 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 TCTN2Q96GX1 697 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 INTS14Q96SY0 518 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 FBXL17Q9UF56 701 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 POMT1Q9Y6A1 747 aa10.38□□□□□ -0.75
SMARCA1-201ENST00000371121 CLPSP04118 112 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 SNRPCP09234 159 aaKnown RBP10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 ELOBQ15370 118 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 DHCR24Q15392 516 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 GUK1Q16774 197 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 TTLL10Q6ZVT0 673 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 REC114Q7Z4M0 266 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 ZNF679Q8IYX0 411 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 OR52N4Q8NGI2 321 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 WFIKKN2Q8TEU8 576 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 TAAR8Q969N4 342 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 SLC25A44Q96H78 314 aaPredicted RBP10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 JSRP1Q96MG2 331 aaPredicted RBP10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 GPR61Q9BZJ8 451 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 POLE3Q9NRF9 147 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 PARPBPQ9NWS1 579 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 RAB2AP61019 212 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 ITPRIPL2Q3MIP1 535 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 CRIP3Q6Q6R5 217 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 VITQ6UXI7 678 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 CACUL1Q86Y37 369 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 PMM1Q92871 262 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 DCAF16Q9NXF7 216 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 IGLV1-36A0A0B4J1U3 117 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 RHPN2P1A8MT19 583 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 EIF1AYO14602 144 aaKnown RBP10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 HOXA2O43364 376 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 EIF1AXP47813 144 aaKnown RBP10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 CASP6P55212 293 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 CCL20P78556 96 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 ACTBL2Q562R1 376 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 ARHGEF39Q8N4T4 335 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 OR13G1Q8NGZ3 307 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 ABHD5Q8WTS1 349 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 RELTQ969Z4 430 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 ZDHHC12Q96GR4 267 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 UFSP2Q9NUQ7 469 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 DHDHQ9UQ10 334 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 MMP24Q9Y5R2 645 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 FRYQ5TBA9 3013 aa10.37□□□□□ -0.75
SMARCA1-201ENST00000371121 A0A0A6YYH2 397 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 A0A1B0GWJ7 208 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 A6NJ64 397 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 ARGFXA6NJG6 315 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms