RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 TRIM64BA6NI03 449 aa12.66□□□□□ -0.38
COL9A1-204ENST00000370496 PRR32B1ATL7 298 aa12.66□□□□□ -0.38
COL9A1-204ENST00000370496 SPRY3O43610 288 aa12.66□□□□□ -0.38
COL9A1-204ENST00000370496 ZNF254O75437 659 aa12.66□□□□□ -0.38
COL9A1-204ENST00000370496 ATP6V1G2O95670 118 aa12.66□□□□□ -0.38
COL9A1-204ENST00000370496 KRT8P05787 483 aa12.66□□□□□ -0.38
COL9A1-204ENST00000370496 OR2T7P0C7T2 308 aa12.66□□□□□ -0.38
COL9A1-204ENST00000370496 DBTP11182 482 aaKnown RBP12.66□□□□□ -0.38
COL9A1-204ENST00000370496 DAOP14920 347 aa12.66□□□□□ -0.38
COL9A1-204ENST00000370496 ANOS1P23352 680 aa12.66□□□□□ -0.38
COL9A1-204ENST00000370496 MAGEB1P43366 347 aa12.66□□□□□ -0.38
COL9A1-204ENST00000370496 ROM1Q03395 351 aa12.66□□□□□ -0.38
COL9A1-204ENST00000370496 EGR3Q06889 387 aa12.66□□□□□ -0.38
COL9A1-204ENST00000370496 IL18R1Q13478 541 aa12.66□□□□□ -0.38
COL9A1-204ENST00000370496 TSTQ16762 297 aaKnown RBP12.66□□□□□ -0.38
COL9A1-204ENST00000370496 DEGS2Q6QHC5 323 aa12.66□□□□□ -0.38
COL9A1-204ENST00000370496 FAM220AQ7Z4H9 259 aa12.66□□□□□ -0.38
COL9A1-204ENST00000370496 OR2T27Q8NH04 317 aa12.66□□□□□ -0.38
COL9A1-204ENST00000370496 SPRYD4Q8WW59 207 aaPredicted RBP12.66□□□□□ -0.38
COL9A1-204ENST00000370496 NRG4Q8WWG1 115 aa12.66□□□□□ -0.38
COL9A1-204ENST00000370496 FAM168AQ92567 244 aa12.66□□□□□ -0.38
COL9A1-204ENST00000370496 SAP30LQ9HAJ7 183 aa12.66□□□□□ -0.38
COL9A1-204ENST00000370496 DECR2Q9NUI1 292 aa12.66□□□□□ -0.38
COL9A1-204ENST00000370496 GTF2A1LQ9UNN4 478 aa12.66□□□□□ -0.38
COL9A1-204ENST00000370496 VPS13CQ709C8 3753 aa12.65□□□□□ -0.38
COL9A1-204ENST00000370496 CHD3Q12873 2000 aaKnown RBP12.65□□□□□ -0.38
COL9A1-204ENST00000370496 ITPR3Q14573 2671 aa12.65□□□□□ -0.38
COL9A1-204ENST00000370496 A0A1W2PQL4 384 aaPredicted RBP12.65□□□□□ -0.38
COL9A1-204ENST00000370496 C5orf63A6NC05 138 aa12.65□□□□□ -0.38
COL9A1-204ENST00000370496 GGT3PA6NGU5 568 aa12.65□□□□□ -0.38
COL9A1-204ENST00000370496 H0YAE9 185 aa12.65□□□□□ -0.38
COL9A1-204ENST00000370496 NCR1O76036 304 aa12.65□□□□□ -0.38
COL9A1-204ENST00000370496 IGHV1-46P01743 117 aa12.65□□□□□ -0.38
COL9A1-204ENST00000370496 TNFSF4P23510 183 aa12.65□□□□□ -0.38
COL9A1-204ENST00000370496 PDLIM4P50479 330 aa12.65□□□□□ -0.38
COL9A1-204ENST00000370496 AQP4P55087 323 aa12.65□□□□□ -0.38
COL9A1-204ENST00000370496 DSCR9P59020 149 aa12.65□□□□□ -0.38
COL9A1-204ENST00000370496 ADARB1P78563 741 aaKnown RBP12.65□□□□□ -0.38
COL9A1-204ENST00000370496 CCL8P80075 99 aa12.65□□□□□ -0.38
COL9A1-204ENST00000370496 ZNF92Q03936 586 aa12.65□□□□□ -0.38
COL9A1-204ENST00000370496 FAM209AQ5JX71 171 aa12.65□□□□□ -0.38
COL9A1-204ENST00000370496 LCE2DQ5TA82 110 aaPredicted RBP12.65□□□□□ -0.38
COL9A1-204ENST00000370496 COMMD2Q86X83 199 aa12.65□□□□□ -0.38
COL9A1-204ENST00000370496 C8orf59Q8N0T1 100 aaPredicted RBP12.65□□□□□ -0.38
COL9A1-204ENST00000370496 CNIH3Q8TBE1 160 aa12.65□□□□□ -0.38
COL9A1-204ENST00000370496 APH1BQ8WW43 257 aa12.65□□□□□ -0.38
COL9A1-204ENST00000370496 ELMOD3Q96FG2 381 aa12.65□□□□□ -0.38
COL9A1-204ENST00000370496 REEP6Q96HR9 211 aa12.65□□□□□ -0.38
COL9A1-204ENST00000370496 DIRC2Q96SL1 478 aa12.65□□□□□ -0.38
COL9A1-204ENST00000370496 RHNO1Q9BSD3 238 aa12.65□□□□□ -0.38
COL9A1-204ENST00000370496 ZDHHC8Q9ULC8 765 aa12.65□□□□□ -0.38
COL9A1-204ENST00000370496 RRP15Q9Y3B9 282 aaKnown RBP12.65□□□□□ -0.38
COL9A1-204ENST00000370496 CELSR1Q9NYQ6 3014 aa12.65□□□□□ -0.38
COL9A1-204ENST00000370496 TMEM269A0A1B0GVZ9 245 aa12.64□□□□□ -0.39
COL9A1-204ENST00000370496 IQCF6A8MYZ5 107 aa12.64□□□□□ -0.39
COL9A1-204ENST00000370496 HPXP02790 462 aa12.64□□□□□ -0.39
COL9A1-204ENST00000370496 CFL1P23528 166 aaKnown RBP12.64□□□□□ -0.39
COL9A1-204ENST00000370496 RIPK1Q13546 671 aa12.64□□□□□ -0.39
COL9A1-204ENST00000370496 PLEKHG7Q6ZR37 379 aa12.64□□□□□ -0.39
COL9A1-204ENST00000370496 SSX6Q7RTT6 188 aa12.64□□□□□ -0.39
COL9A1-204ENST00000370496 PRSS45Q7RTY3 260 aa12.64□□□□□ -0.39
COL9A1-204ENST00000370496 YIPF7Q8N8F6 280 aa12.64□□□□□ -0.39
COL9A1-204ENST00000370496 OR8G5Q8NG78 346 aa12.64□□□□□ -0.39
COL9A1-204ENST00000370496 OR2Z1Q8NG97 314 aa12.64□□□□□ -0.39
COL9A1-204ENST00000370496 OR8B12Q8NGG6 310 aa12.64□□□□□ -0.39
COL9A1-204ENST00000370496 UBASH3BQ8TF42 649 aa12.64□□□□□ -0.39
COL9A1-204ENST00000370496 LGALS12Q96DT0 336 aa12.64□□□□□ -0.39
COL9A1-204ENST00000370496 PIMREGQ9BSJ6 248 aa12.64□□□□□ -0.39
COL9A1-204ENST00000370496 EGLN1Q9GZT9 426 aa12.64□□□□□ -0.39
COL9A1-204ENST00000370496 RGCCQ9H4X1 137 aa12.64□□□□□ -0.39
COL9A1-204ENST00000370496 MOB1AQ9H8S9 216 aa12.64□□□□□ -0.39
COL9A1-204ENST00000370496 AMBNQ9NP70 447 aa12.64□□□□□ -0.39
COL9A1-204ENST00000370496 NKIRAS2Q9NYR9 191 aa12.64□□□□□ -0.39
COL9A1-204ENST00000370496 METRNQ9UJH8 293 aa12.64□□□□□ -0.39
COL9A1-204ENST00000370496 RPL36Q9Y3U8 105 aaKnown RBP12.64□□□□□ -0.39
COL9A1-204ENST00000370496 PCDHGB1Q9Y5G3 927 aa12.64□□□□□ -0.39
COL9A1-204ENST00000370496 DAPL1A0PJW8 107 aa12.63□□□□□ -0.39
COL9A1-204ENST00000370496 LOC110117498-PIK3R3F6TDL0 507 aa12.63□□□□□ -0.39
COL9A1-204ENST00000370496 H7C1Q1 480 aa12.63□□□□□ -0.39
COL9A1-204ENST00000370496 MAGEB4O15481 346 aaPredicted RBP12.63□□□□□ -0.39
COL9A1-204ENST00000370496 WBP4O75554 376 aaKnown RBP12.63□□□□□ -0.39
COL9A1-204ENST00000370496 GNAO1P09471 354 aa12.63□□□□□ -0.39
COL9A1-204ENST00000370496 DCTDP32321 178 aa12.63□□□□□ -0.39
COL9A1-204ENST00000370496 TNFAIP6P98066 277 aaPredicted RBP12.63□□□□□ -0.39
COL9A1-204ENST00000370496 MFGE8Q08431 387 aaPredicted RBP12.63□□□□□ -0.39
COL9A1-204ENST00000370496 TNK1Q13470 666 aa12.63□□□□□ -0.39
COL9A1-204ENST00000370496 SMN1Q16637 294 aaKnown RBP12.63□□□□□ -0.39
COL9A1-204ENST00000370496 BCL2L15Q5TBC7 163 aa12.63□□□□□ -0.39
COL9A1-204ENST00000370496 OR10AD1Q8NGE0 317 aa12.63□□□□□ -0.39
COL9A1-204ENST00000370496 OR56B2PQ8NGI1 322 aa12.63□□□□□ -0.39
COL9A1-204ENST00000370496 MRPL48Q96GC5 212 aaKnown RBP12.63□□□□□ -0.39
COL9A1-204ENST00000370496 FAM206AQ9NX38 181 aa12.63□□□□□ -0.39
COL9A1-204ENST00000370496 MRM2Q9UI43 246 aaKnown RBP12.63□□□□□ -0.39
COL9A1-204ENST00000370496 GNG8Q9UK08 70 aa12.63□□□□□ -0.39
COL9A1-204ENST00000370496 HSPE1-MOB4S4R3N1 261 aa12.63□□□□□ -0.39
COL9A1-204ENST00000370496 TANC2Q9HCD6 1990 aa12.62□□□□□ -0.39
COL9A1-204ENST00000370496 IGHV4-30-2A0A087WSY4 118 aa12.62□□□□□ -0.39
COL9A1-204ENST00000370496 LOC390937A0A1W2PQ73 354 aa12.62□□□□□ -0.39
COL9A1-204ENST00000370496 CD300LBA8K4G0 201 aa12.62□□□□□ -0.39
COL9A1-204ENST00000370496 H0YJX3 145 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms