RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 SULT1C4O75897 302 aa11.78□□□□□ -0.52
SSR4-202ENST00000370085 VHLP40337 213 aa11.78□□□□□ -0.52
SSR4-202ENST00000370085 AQP4P55087 323 aa11.78□□□□□ -0.52
SSR4-202ENST00000370085 GK2Q14410 553 aaPredicted RBP11.78□□□□□ -0.52
SSR4-202ENST00000370085 MSMPQ1L6U9 139 aa11.78□□□□□ -0.52
SSR4-202ENST00000370085 CLEC2AQ6UVW9 174 aa11.78□□□□□ -0.52
SSR4-202ENST00000370085 FAM57BQ71RH2 274 aa11.78□□□□□ -0.52
SSR4-202ENST00000370085 KCTD20Q7Z5Y7 419 aa11.78□□□□□ -0.52
SSR4-202ENST00000370085 THAP5Q7Z6K1 395 aa11.78□□□□□ -0.52
SSR4-202ENST00000370085 NAA40Q86UY6 237 aa11.78□□□□□ -0.52
SSR4-202ENST00000370085 ACBD7Q8N6N7 88 aa11.78□□□□□ -0.52
SSR4-202ENST00000370085 YIPF7Q8N8F6 280 aa11.78□□□□□ -0.52
SSR4-202ENST00000370085 SPRYD4Q8WW59 207 aaPredicted RBP11.78□□□□□ -0.52
SSR4-202ENST00000370085 NRG4Q8WWG1 115 aa11.78□□□□□ -0.52
SSR4-202ENST00000370085 TFAP2CQ92754 450 aa11.78□□□□□ -0.52
SSR4-202ENST00000370085 ITFG2Q969R8 447 aa11.78□□□□□ -0.52
SSR4-202ENST00000370085 EGLN1Q9GZT9 426 aa11.78□□□□□ -0.52
SSR4-202ENST00000370085 SLC22A4Q9H015 551 aa11.78□□□□□ -0.52
SSR4-202ENST00000370085 DECR2Q9NUI1 292 aa11.78□□□□□ -0.52
SSR4-202ENST00000370085 MYEF2Q9P2K5 600 aaKnown RBP11.78□□□□□ -0.52
SSR4-202ENST00000370085 COPS3Q9UNS2 423 aa11.78□□□□□ -0.52
SSR4-202ENST00000370085 EXOGQ9Y2C4 368 aaKnown RBP11.78□□□□□ -0.52
SSR4-202ENST00000370085 METTL15A6NJ78 407 aa11.77□□□□□ -0.53
SSR4-202ENST00000370085 PSMD9O00233 223 aa11.77□□□□□ -0.53
SSR4-202ENST00000370085 SSX4O60224 188 aa11.77□□□□□ -0.53
SSR4-202ENST00000370085 APOL3O95236 402 aa11.77□□□□□ -0.53
SSR4-202ENST00000370085 CLIC3O95833 236 aa11.77□□□□□ -0.53
SSR4-202ENST00000370085 IGHV4-39P01824 125 aa11.77□□□□□ -0.53
SSR4-202ENST00000370085 SLC2A1P11166 492 aa11.77□□□□□ -0.53
SSR4-202ENST00000370085 NAT2P11245 290 aa11.77□□□□□ -0.53
SSR4-202ENST00000370085 DDOSTP39656 456 aa11.77□□□□□ -0.53
SSR4-202ENST00000370085 MMP16P51512 607 aa11.77□□□□□ -0.53
SSR4-202ENST00000370085 ISL1P61371 349 aa11.77□□□□□ -0.53
SSR4-202ENST00000370085 CSNK2BP67870 215 aa11.77□□□□□ -0.53
SSR4-202ENST00000370085 HLXQ14774 488 aaPredicted RBP11.77□□□□□ -0.53
SSR4-202ENST00000370085 SNAI3Q3KNW1 292 aa11.77□□□□□ -0.53
SSR4-202ENST00000370085 ALKBH6Q3KRA9 238 aa11.77□□□□□ -0.53
SSR4-202ENST00000370085 IZUMO2Q6UXV1 221 aa11.77□□□□□ -0.53
SSR4-202ENST00000370085 EGFL6Q8IUX8 553 aa11.77□□□□□ -0.53
SSR4-202ENST00000370085 OR13G1Q8NGZ3 307 aa11.77□□□□□ -0.53
SSR4-202ENST00000370085 SORCS2Q96PQ0 1159 aa11.77□□□□□ -0.53
SSR4-202ENST00000370085 TTTY10Q9BZA0 68 aa11.77□□□□□ -0.53
SSR4-202ENST00000370085 TPK1Q9H3S4 243 aa11.77□□□□□ -0.53
SSR4-202ENST00000370085 CHCHD3Q9NX63 227 aaKnown RBP11.77□□□□□ -0.53
SSR4-202ENST00000370085 NKIRAS2Q9NYR9 191 aa11.77□□□□□ -0.53
SSR4-202ENST00000370085 GTF2A1LQ9UNN4 478 aa11.77□□□□□ -0.53
SSR4-202ENST00000370085 PRRC2AP48634 2157 aaKnown RBP11.77□□□□□ -0.53
SSR4-202ENST00000370085 ITPR3Q14573 2671 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 OTOGQ6ZRI0 2925 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 IQCF6A8MYZ5 107 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 LOC110117498-PIK3R3F6TDL0 507 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 MMP15P51511 669 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 CLEC12BQ2HXU8 276 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 GFOD2Q3B7J2 385 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 GLYATL3Q5SZD4 288 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 C6orf52Q5T4I8 152 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 BCL2L15Q5TBC7 163 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 OR2T2Q6IF00 324 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 SPNS3Q6ZMD2 512 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 COMMD2Q86X83 199 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 OR8G5Q8NG78 346 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 CNIH3Q8TBE1 160 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 HAVCR2Q8TDQ0 301 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 APH1BQ8WW43 257 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 LGALS12Q96DT0 336 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 REEP6Q96HR9 211 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 RHNO1Q9BSD3 238 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 REPIN1Q9BWE0 567 aaKnown RBP11.76□□□□□ -0.53
SSR4-202ENST00000370085 RASSF4Q9H2L5 321 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 POFUT1Q9H488 388 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 Q9H521 79 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 AMBNQ9NP70 447 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 TMEM100Q9NV29 134 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 MRPS18AQ9NVS2 196 aaKnown RBP11.76□□□□□ -0.53
SSR4-202ENST00000370085 AASSQ9UDR5 926 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 GNG8Q9UK08 70 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 SNX5Q9Y5X3 404 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 R4GMQ9 66 aa11.76□□□□□ -0.53
SSR4-202ENST00000370085 A0A0U1RQV5 110 aa11.75□□□□□ -0.53
SSR4-202ENST00000370085 EFCAB10A6NFE3 127 aa11.75□□□□□ -0.53
SSR4-202ENST00000370085 NDUFS8O00217 210 aa11.75□□□□□ -0.53
SSR4-202ENST00000370085 SPRY3O43610 288 aa11.75□□□□□ -0.53
SSR4-202ENST00000370085 WBP4O75554 376 aaKnown RBP11.75□□□□□ -0.53
SSR4-202ENST00000370085 MTRF1O75570 445 aaKnown RBP11.75□□□□□ -0.53
SSR4-202ENST00000370085 ADH4P08319 380 aa11.75□□□□□ -0.53
SSR4-202ENST00000370085 GNAO1P09471 354 aa11.75□□□□□ -0.53
SSR4-202ENST00000370085 DAOP14920 347 aa11.75□□□□□ -0.53
SSR4-202ENST00000370085 MYL12AP19105 171 aa11.75□□□□□ -0.53
SSR4-202ENST00000370085 DCKP27707 260 aa11.75□□□□□ -0.53
SSR4-202ENST00000370085 PDLIM4P50479 330 aa11.75□□□□□ -0.53
SSR4-202ENST00000370085 ZNF92Q03936 586 aa11.75□□□□□ -0.53
SSR4-202ENST00000370085 MZT1Q08AG7 82 aa11.75□□□□□ -0.53
SSR4-202ENST00000370085 MRPL28Q13084 256 aaKnown RBP11.75□□□□□ -0.53
SSR4-202ENST00000370085 CDK5R2Q13319 367 aa11.75□□□□□ -0.53
SSR4-202ENST00000370085 OR5AS1Q8N127 324 aa11.75□□□□□ -0.53
SSR4-202ENST00000370085 ZCCHC24Q8N2G6 241 aaKnown RBP11.75□□□□□ -0.53
SSR4-202ENST00000370085 ZNF540Q8NDQ6 660 aa11.75□□□□□ -0.53
SSR4-202ENST00000370085 BHLHE23Q8NDY6 225 aa11.75□□□□□ -0.53
SSR4-202ENST00000370085 CSNK2A3Q8NEV1 391 aa11.75□□□□□ -0.53
SSR4-202ENST00000370085 OR2AE1Q8NHA4 323 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms