RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 TOR3AQ9H497 397 aa17.3■□□□□ 0.36
SMNDC1-201ENST00000369592 G6PC2Q9NQR9 355 aa17.3■□□□□ 0.36
SMNDC1-201ENST00000369592 CENPMQ9NSP4 180 aa17.3■□□□□ 0.36
SMNDC1-201ENST00000369592 TMEM100Q9NV29 134 aa17.3■□□□□ 0.36
SMNDC1-201ENST00000369592 PPP1R3CQ9UQK1 317 aa17.3■□□□□ 0.36
SMNDC1-201ENST00000369592 CD300LBA8K4G0 201 aa17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 TMEM178BH3BS89 294 aa17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 FSTL3O95633 263 aa17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 PTBP3O95758 552 aaKnown RBP17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 FASP25445 335 aa17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 PMELP40967 661 aa17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 MMP16P51512 607 aa17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 RAD23AP54725 363 aa17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 ESRRGP62508 458 aa17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 GRB2P62993 217 aaKnown RBP17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 MAB21L1Q13394 359 aa17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 EIF2B1Q14232 305 aaKnown RBP17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 PTGES3Q15185 160 aaKnown RBP17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 ZNF181Q2M3W8 571 aa17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 PGAP1Q75T13 922 aa17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 GLCCI1Q86VQ1 547 aa17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 LRRC28Q86X40 367 aaPredicted RBP17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 CELF2-AS1Q8N7Q2 184 aa17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 BHLHE23Q8NDY6 225 aa17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 OR6N2Q8NGY6 317 aa17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 OR51F2Q8NH61 342 aa17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 OR2AE1Q8NHA4 323 aa17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 OTOSQ8NHW6 89 aa17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 RAB39BQ96DA2 213 aa17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 ZMYND19Q96E35 227 aaPredicted RBP17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 HIF1ANQ9NWT6 349 aa17.29■□□□□ 0.36
SMNDC1-201ENST00000369592 DOCK11Q5JSL3 2073 aa17.28■□□□□ 0.36
SMNDC1-201ENST00000369592 TRAV20A0A0B4J274 112 aa17.28■□□□□ 0.36
SMNDC1-201ENST00000369592 F5H5P2 479 aa17.28■□□□□ 0.36
SMNDC1-201ENST00000369592 IFNL4K9M1U5 179 aa17.28■□□□□ 0.36
SMNDC1-201ENST00000369592 PLPP2O43688 288 aa17.28■□□□□ 0.36
SMNDC1-201ENST00000369592 MITFO75030 526 aaPredicted RBP17.28■□□□□ 0.36
SMNDC1-201ENST00000369592 IFNA2P01563 188 aa17.28■□□□□ 0.36
SMNDC1-201ENST00000369592 SRD5A1P18405 259 aa17.28■□□□□ 0.36
SMNDC1-201ENST00000369592 EPHA2P29317 976 aa17.28■□□□□ 0.36
SMNDC1-201ENST00000369592 CD200P41217 278 aa17.28■□□□□ 0.36
SMNDC1-201ENST00000369592 ZMYND11Q15326 602 aa17.28■□□□□ 0.36
SMNDC1-201ENST00000369592 TMEM155Q4W5P6 130 aa17.28■□□□□ 0.36
SMNDC1-201ENST00000369592 AMIGO2Q86SJ2 522 aa17.28■□□□□ 0.36
SMNDC1-201ENST00000369592 ZNF319Q9P2F9 582 aa17.28■□□□□ 0.36
SMNDC1-201ENST00000369592 CCDC182A6NF36 153 aa17.27■□□□□ 0.36
SMNDC1-201ENST00000369592 F5H0A9 414 aaPredicted RBP17.27■□□□□ 0.36
SMNDC1-201ENST00000369592 G3V2T6 193 aa17.27■□□□□ 0.36
SMNDC1-201ENST00000369592 SELENOFO60613 162 aa17.27■□□□□ 0.36
SMNDC1-201ENST00000369592 HLA-DPB1P04440 258 aa17.27■□□□□ 0.36
SMNDC1-201ENST00000369592 SLC2A1P11166 492 aa17.27■□□□□ 0.36
SMNDC1-201ENST00000369592 ANPEPP15144 967 aa17.27■□□□□ 0.36
SMNDC1-201ENST00000369592 PCMT1P22061 227 aa17.27■□□□□ 0.36
SMNDC1-201ENST00000369592 SLC15A1P46059 708 aa17.27■□□□□ 0.36
SMNDC1-201ENST00000369592 SLC6A9P48067 706 aa17.27■□□□□ 0.36
SMNDC1-201ENST00000369592 SRP9P49458 86 aaKnown RBP17.27■□□□□ 0.36
SMNDC1-201ENST00000369592 SLX4IPQ5VYV7 408 aa17.27■□□□□ 0.36
SMNDC1-201ENST00000369592 C1orf229Q6ZS94 237 aaPredicted RBP17.27■□□□□ 0.36
SMNDC1-201ENST00000369592 SPATC1Q76KD6 591 aa17.27■□□□□ 0.36
SMNDC1-201ENST00000369592 MRPL21Q7Z2W9 205 aaKnown RBP17.27■□□□□ 0.36
SMNDC1-201ENST00000369592 ZNF454Q8N9F8 522 aa17.27■□□□□ 0.36
SMNDC1-201ENST00000369592 Q8TCH9 128 aa17.27■□□□□ 0.36
SMNDC1-201ENST00000369592 LRTOMTQ8WZ04 291 aa17.27■□□□□ 0.36
SMNDC1-201ENST00000369592 OTULINQ96BN8 352 aa17.27■□□□□ 0.36
SMNDC1-201ENST00000369592 LPAR2Q9HBW0 351 aa17.27■□□□□ 0.36
SMNDC1-201ENST00000369592 KLHDC2Q9Y2U9 406 aa17.27■□□□□ 0.36
SMNDC1-201ENST00000369592 POLR3KQ9Y2Y1 108 aaPredicted RBP17.27■□□□□ 0.36
SMNDC1-201ENST00000369592 ZAR1LA6NP61 321 aa17.26■□□□□ 0.35
SMNDC1-201ENST00000369592 FCGR1AP12314 374 aa17.26■□□□□ 0.35
SMNDC1-201ENST00000369592 ALOX5APP20292 161 aa17.26■□□□□ 0.35
SMNDC1-201ENST00000369592 HNF1AP20823 631 aa17.26■□□□□ 0.35
SMNDC1-201ENST00000369592 CX3CR1P49238 355 aa17.26■□□□□ 0.35
SMNDC1-201ENST00000369592 BTG1P62324 171 aa17.26■□□□□ 0.35
SMNDC1-201ENST00000369592 SNAPC1Q16533 368 aa17.26■□□□□ 0.35
SMNDC1-201ENST00000369592 C12orf73Q69YU5 71 aa17.26■□□□□ 0.35
SMNDC1-201ENST00000369592 PEG10Q86TG7 708 aaKnown RBP17.26■□□□□ 0.35
SMNDC1-201ENST00000369592 ZNF420Q8TAQ5 688 aaPredicted RBP17.26■□□□□ 0.35
SMNDC1-201ENST00000369592 SGK3Q96BR1 496 aa17.26■□□□□ 0.35
SMNDC1-201ENST00000369592 TEAD3Q99594 435 aa17.26■□□□□ 0.35
SMNDC1-201ENST00000369592 GAL3ST1Q99999 423 aa17.26■□□□□ 0.35
SMNDC1-201ENST00000369592 SLC22A4Q9H015 551 aa17.26■□□□□ 0.35
SMNDC1-201ENST00000369592 OPA3Q9H6K4 179 aa17.26■□□□□ 0.35
SMNDC1-201ENST00000369592 TVP23BQ9NYZ1 205 aa17.26■□□□□ 0.35
SMNDC1-201ENST00000369592 MRPL15Q9P015 296 aaKnown RBP17.26■□□□□ 0.35
SMNDC1-201ENST00000369592 KIF17Q9P2E2 1029 aa17.26■□□□□ 0.35
SMNDC1-201ENST00000369592 XRCC2O43543 280 aa17.25■□□□□ 0.35
SMNDC1-201ENST00000369592 PRKYO43930 277 aa17.25■□□□□ 0.35
SMNDC1-201ENST00000369592 FAM3AP98173 230 aa17.25■□□□□ 0.35
SMNDC1-201ENST00000369592 TAF13Q15543 124 aa17.25■□□□□ 0.35
SMNDC1-201ENST00000369592 KLHL12Q53G59 568 aa17.25■□□□□ 0.35
SMNDC1-201ENST00000369592 ZDHHC13Q8IUH4 622 aa17.25■□□□□ 0.35
SMNDC1-201ENST00000369592 SPRYD4Q8WW59 207 aaPredicted RBP17.25■□□□□ 0.35
SMNDC1-201ENST00000369592 CENPNQ96H22 339 aaPredicted RBP17.25■□□□□ 0.35
SMNDC1-201ENST00000369592 PATZ1Q9HBE1 687 aaKnown RBP17.25■□□□□ 0.35
SMNDC1-201ENST00000369592 KRT84Q9NSB2 600 aa17.25■□□□□ 0.35
SMNDC1-201ENST00000369592 PPIAL4EA0A075B759 164 aa17.24■□□□□ 0.35
SMNDC1-201ENST00000369592 PPIAL4CA0A0B4J2A2 164 aa17.24■□□□□ 0.35
SMNDC1-201ENST00000369592 PPIAL4DF5H284 164 aa17.24■□□□□ 0.35
SMNDC1-201ENST00000369592 GMDSO60547 372 aa17.24■□□□□ 0.35
SMNDC1-201ENST00000369592 AVPP01185 164 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms