RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 OR10D3Q8NH80 312 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 SMAP2Q8WU79 429 aaPredicted RBP7.69□□□□□ -1.18
TPM3-213ENST00000368545 TMEM203Q969S6 136 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 INTS12Q96CB8 462 aaKnown RBP7.69□□□□□ -1.18
TPM3-213ENST00000368545 MED18Q9BUE0 208 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 EMC6Q9BV81 110 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 TMED9Q9BVK6 235 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 SRXN1Q9BYN0 137 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 SLIRPQ9GZT3 109 aaKnown RBP7.69□□□□□ -1.18
TPM3-213ENST00000368545 CTDSP1Q9GZU7 261 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 CXXC4Q9H2H0 198 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 ST6GALNAC2Q9UJ37 374 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 MED12Q93074 2177 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 TRAV17A0A0B4J275 112 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 ZNF593O00488 134 aaPredicted RBP7.68□□□□□ -1.18
TPM3-213ENST00000368545 GABRPO00591 440 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 SMAD9O15198 467 aaKnown RBP7.68□□□□□ -1.18
TPM3-213ENST00000368545 OGG1O15527 345 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 GPRIN2O60269 458 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 RAMP1O60894 148 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 WNT11O96014 354 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 ACTL6AO96019 429 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 LHX2P50458 406 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 CLDN17P56750 224 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 FABP5Q01469 135 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 FMODQ06828 376 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 DYNC1I2Q13409 638 aaKnown RBP7.68□□□□□ -1.18
TPM3-213ENST00000368545 CAMK2DQ13557 499 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 BCL2A1Q16548 175 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 PCK2Q16822 640 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 ZNF404Q494X3 552 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 C22orf42Q6IC83 251 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 ARL9Q6T311 187 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 UBQLNLQ8IYU4 475 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 Q8NFD4 153 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 PGLYRP3Q96LB9 341 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 TTTY10Q9BZA0 68 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 MMP27Q9H306 513 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 RNF167Q9H6Y7 350 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 ACOXLQ9NUZ1 547 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 MRPL22Q9NWU5 206 aaKnown RBP7.68□□□□□ -1.18
TPM3-213ENST00000368545 KCNG2Q9UJ96 466 aa7.68□□□□□ -1.18
TPM3-213ENST00000368545 UBE2J1Q9Y385 318 aaPredicted RBP7.68□□□□□ -1.18
TPM3-213ENST00000368545 ALPK2Q86TB3 2170 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 CXCL13O43927 109 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 LYL1P12980 280 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 ZNF708P17019 499 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 EDNRAP25101 427 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 LAP3P28838 519 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 RFC3P40938 356 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 CSNK1A1P48729 337 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 TIRAPP58753 221 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 SLC10A1Q14973 349 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 ETFDHQ16134 617 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 MOGQ16653 247 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 ZNF544Q6NX49 715 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 XKRXQ6PP77 449 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 PAMR1Q6UXH9 720 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 YIPF7Q8N8F6 280 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 MCFD2Q8NI22 146 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 RPS4Y2Q8TD47 263 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 THEM6Q8WUY1 208 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 S100ZQ8WXG8 99 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 ABTB1Q969K4 478 aaPredicted RBP7.67□□□□□ -1.18
TPM3-213ENST00000368545 TRMT61AQ96FX7 289 aaKnown RBP7.67□□□□□ -1.18
TPM3-213ENST00000368545 MROQ9BYG7 248 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 GLTPQ9NZD2 209 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 IKZF2Q9UKS7 526 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 IGHV3-15A0A0B4J1V0 119 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 TRBV2A0A0J9YWF9 115 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 A8MV72 311 aaPredicted RBP7.67□□□□□ -1.18
TPM3-213ENST00000368545 E9PI62 339 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 H0YC42 278 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 CYTIPO60759 359 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 GATBO75879 557 aaKnown RBP7.67□□□□□ -1.18
TPM3-213ENST00000368545 GPANK1O95872 356 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 STARP49675 285 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 GSK3AP49840 483 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 GDI2P50395 445 aaKnown RBP7.67□□□□□ -1.18
TPM3-213ENST00000368545 RORCP51449 518 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 ZNF133P52736 654 aaPredicted RBP7.67□□□□□ -1.18
TPM3-213ENST00000368545 SUCLG1P53597 346 aaKnown RBP7.67□□□□□ -1.18
TPM3-213ENST00000368545 CLDN18P56856 261 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 SLC3A1Q07837 685 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 EIF2B1Q14232 305 aaKnown RBP7.67□□□□□ -1.18
TPM3-213ENST00000368545 KCNMB1Q16558 191 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 C10orf128Q5T292 105 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 SLC25A47Q6Q0C1 308 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 TRILQ7L0X0 811 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 FCRLAQ7L513 359 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 WDFY1Q8IWB7 410 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 ZNF679Q8IYX0 411 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 OR52N5Q8NH56 324 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 NEIL3Q8TAT5 605 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 MCHR2Q969V1 340 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 SLC25A46Q96AG3 418 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 OR2M2Q96R28 347 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 OR8B4Q96RC9 309 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 HDHD5Q9BXW7 423 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 NXF2Q9GZY0 626 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms