RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 CRISP1P54107 249 aa15.96■□□□□ 0.15
CKS1B-203ENST00000368439 C1orf146Q5VVC0 180 aa15.96■□□□□ 0.15
CKS1B-203ENST00000368439 SPATC1Q76KD6 591 aa15.96■□□□□ 0.15
CKS1B-203ENST00000368439 PRSS45Q7RTY3 260 aa15.96■□□□□ 0.15
CKS1B-203ENST00000368439 BBS1Q8NFJ9 593 aa15.96■□□□□ 0.15
CKS1B-203ENST00000368439 RAB39BQ96DA2 213 aa15.96■□□□□ 0.15
CKS1B-203ENST00000368439 PAPOLBQ9NRJ5 636 aaKnown RBP15.96■□□□□ 0.15
CKS1B-203ENST00000368439 TMEM178BH3BS89 294 aa15.95■□□□□ 0.14
CKS1B-203ENST00000368439 SELENOFO60613 162 aa15.95■□□□□ 0.14
CKS1B-203ENST00000368439 GRB2P62993 217 aaKnown RBP15.95■□□□□ 0.14
CKS1B-203ENST00000368439 MAB21L1Q13394 359 aa15.95■□□□□ 0.14
CKS1B-203ENST00000368439 ZMYND11Q15326 602 aa15.95■□□□□ 0.14
CKS1B-203ENST00000368439 RHOUQ7L0Q8 258 aa15.95■□□□□ 0.14
CKS1B-203ENST00000368439 SHFQ7M4L6 423 aa15.95■□□□□ 0.14
CKS1B-203ENST00000368439 MRPL21Q7Z2W9 205 aaKnown RBP15.95■□□□□ 0.14
CKS1B-203ENST00000368439 PEG10Q86TG7 708 aaKnown RBP15.95■□□□□ 0.14
CKS1B-203ENST00000368439 LRRC28Q86X40 367 aaPredicted RBP15.95■□□□□ 0.14
CKS1B-203ENST00000368439 ZNF420Q8TAQ5 688 aaPredicted RBP15.95■□□□□ 0.14
CKS1B-203ENST00000368439 SPSB4Q96A44 273 aa15.95■□□□□ 0.14
CKS1B-203ENST00000368439 GAL3ST1Q99999 423 aa15.95■□□□□ 0.14
CKS1B-203ENST00000368439 AP4S1Q9Y587 144 aa15.95■□□□□ 0.14
CKS1B-203ENST00000368439 TRAV20A0A0B4J274 112 aa15.94■□□□□ 0.14
CKS1B-203ENST00000368439 ISPDA4D126 451 aa15.94■□□□□ 0.14
CKS1B-203ENST00000368439 CD300LBA8K4G0 201 aa15.94■□□□□ 0.14
CKS1B-203ENST00000368439 MITFO75030 526 aaPredicted RBP15.94■□□□□ 0.14
CKS1B-203ENST00000368439 SBK2P0C263 348 aa15.94■□□□□ 0.14
CKS1B-203ENST00000368439 ANPEPP15144 967 aa15.94■□□□□ 0.14
CKS1B-203ENST00000368439 PCMT1P22061 227 aa15.94■□□□□ 0.14
CKS1B-203ENST00000368439 PMELP40967 661 aa15.94■□□□□ 0.14
CKS1B-203ENST00000368439 OPRL1P41146 370 aa15.94■□□□□ 0.14
CKS1B-203ENST00000368439 GATA4P43694 442 aa15.94■□□□□ 0.14
CKS1B-203ENST00000368439 SRP9P49458 86 aaKnown RBP15.94■□□□□ 0.14
CKS1B-203ENST00000368439 PTGES3Q15185 160 aaKnown RBP15.94■□□□□ 0.14
CKS1B-203ENST00000368439 TAF13Q15543 124 aa15.94■□□□□ 0.14
CKS1B-203ENST00000368439 TMEM155Q4W5P6 130 aa15.94■□□□□ 0.14
CKS1B-203ENST00000368439 SLC35D3Q5M8T2 416 aa15.94■□□□□ 0.14
CKS1B-203ENST00000368439 OTOSQ8NHW6 89 aa15.94■□□□□ 0.14
CKS1B-203ENST00000368439 GABARAPL1Q9H0R8 117 aa15.94■□□□□ 0.14
CKS1B-203ENST00000368439 TOR3AQ9H497 397 aa15.94■□□□□ 0.14
CKS1B-203ENST00000368439 TVP23BQ9NYZ1 205 aa15.94■□□□□ 0.14
CKS1B-203ENST00000368439 KIF17Q9P2E2 1029 aa15.94■□□□□ 0.14
CKS1B-203ENST00000368439 IGHV3-64DA0A0J9YX35 117 aa15.93■□□□□ 0.14
CKS1B-203ENST00000368439 G3V2T6 193 aa15.93■□□□□ 0.14
CKS1B-203ENST00000368439 IFNL4K9M1U5 179 aa15.93■□□□□ 0.14
CKS1B-203ENST00000368439 FASP25445 335 aa15.93■□□□□ 0.14
CKS1B-203ENST00000368439 EPHA2P29317 976 aa15.93■□□□□ 0.14
CKS1B-203ENST00000368439 CD200P41217 278 aa15.93■□□□□ 0.14
CKS1B-203ENST00000368439 SLC15A1P46059 708 aa15.93■□□□□ 0.14
CKS1B-203ENST00000368439 CX3CR1P49238 355 aa15.93■□□□□ 0.14
CKS1B-203ENST00000368439 RAD23AP54725 363 aa15.93■□□□□ 0.14
CKS1B-203ENST00000368439 BTG1P62324 171 aa15.93■□□□□ 0.14
CKS1B-203ENST00000368439 ESRRGP62508 458 aa15.93■□□□□ 0.14
CKS1B-203ENST00000368439 EFNB1P98172 346 aa15.93■□□□□ 0.14
CKS1B-203ENST00000368439 ZNF181Q2M3W8 571 aa15.93■□□□□ 0.14
CKS1B-203ENST00000368439 KLHL12Q53G59 568 aa15.93■□□□□ 0.14
CKS1B-203ENST00000368439 KDM4DQ6B0I6 523 aa15.93■□□□□ 0.14
CKS1B-203ENST00000368439 ZNF771Q7L3S4 317 aaPredicted RBP15.93■□□□□ 0.14
CKS1B-203ENST00000368439 CXXC5Q7LFL8 322 aaKnown RBP15.93■□□□□ 0.14
CKS1B-203ENST00000368439 AMIGO2Q86SJ2 522 aa15.93■□□□□ 0.14
CKS1B-203ENST00000368439 CELF2-AS1Q8N7Q2 184 aa15.93■□□□□ 0.14
CKS1B-203ENST00000368439 SPRYD4Q8WW59 207 aaPredicted RBP15.93■□□□□ 0.14
CKS1B-203ENST00000368439 LRTOMTQ8WZ04 291 aa15.93■□□□□ 0.14
CKS1B-203ENST00000368439 ZNF319Q9P2F9 582 aa15.93■□□□□ 0.14
CKS1B-203ENST00000368439 KLHDC2Q9Y2U9 406 aa15.93■□□□□ 0.14
CKS1B-203ENST00000368439 CCDC182A6NF36 153 aa15.92■□□□□ 0.14
CKS1B-203ENST00000368439 XRCC2O43543 280 aa15.92■□□□□ 0.14
CKS1B-203ENST00000368439 AVPP01185 164 aa15.92■□□□□ 0.14
CKS1B-203ENST00000368439 CA6P23280 308 aa15.92■□□□□ 0.14
CKS1B-203ENST00000368439 ZFP36P26651 326 aaKnown RBP15.92■□□□□ 0.14
CKS1B-203ENST00000368439 SNAPC1Q16533 368 aa15.92■□□□□ 0.14
CKS1B-203ENST00000368439 C1orf229Q6ZS94 237 aaPredicted RBP15.92■□□□□ 0.14
CKS1B-203ENST00000368439 MOGAT3Q86VF5 341 aa15.92■□□□□ 0.14
CKS1B-203ENST00000368439 ZNF454Q8N9F8 522 aa15.92■□□□□ 0.14
CKS1B-203ENST00000368439 SGK3Q96BR1 496 aa15.92■□□□□ 0.14
CKS1B-203ENST00000368439 PLEKHA8Q96JA3 519 aa15.92■□□□□ 0.14
CKS1B-203ENST00000368439 PATZ1Q9HBE1 687 aaKnown RBP15.92■□□□□ 0.14
CKS1B-203ENST00000368439 UBAP1Q9NZ09 502 aa15.92■□□□□ 0.14
CKS1B-203ENST00000368439 MRPL15Q9P015 296 aaKnown RBP15.92■□□□□ 0.14
CKS1B-203ENST00000368439 F5H0A9 414 aaPredicted RBP15.91■□□□□ 0.14
CKS1B-203ENST00000368439 PHF1O43189 567 aaPredicted RBP15.91■□□□□ 0.14
CKS1B-203ENST00000368439 PRKYO43930 277 aa15.91■□□□□ 0.14
CKS1B-203ENST00000368439 PTBP3O95758 552 aaKnown RBP15.91■□□□□ 0.14
CKS1B-203ENST00000368439 CYB5R3P00387 301 aaPredicted RBP15.91■□□□□ 0.14
CKS1B-203ENST00000368439 LYNP07948 512 aa15.91■□□□□ 0.14
CKS1B-203ENST00000368439 HSD11B1P28845 292 aa15.91■□□□□ 0.14
CKS1B-203ENST00000368439 NAA10P41227 235 aaPredicted RBP15.91■□□□□ 0.14
CKS1B-203ENST00000368439 ZNF121P58317 390 aaPredicted RBP15.91■□□□□ 0.14
CKS1B-203ENST00000368439 APOFQ13790 326 aa15.91■□□□□ 0.14
CKS1B-203ENST00000368439 SLX4IPQ5VYV7 408 aa15.91■□□□□ 0.14
CKS1B-203ENST00000368439 SPICQ8N5J4 248 aa15.91■□□□□ 0.14
CKS1B-203ENST00000368439 Q8TCH9 128 aa15.91■□□□□ 0.14
CKS1B-203ENST00000368439 TEAD3Q99594 435 aa15.91■□□□□ 0.14
CKS1B-203ENST00000368439 TEX12Q9BXU0 123 aa15.91■□□□□ 0.14
CKS1B-203ENST00000368439 TMPRSS13Q9BYE2 586 aa15.91■□□□□ 0.14
CKS1B-203ENST00000368439 SLC22A4Q9H015 551 aa15.91■□□□□ 0.14
CKS1B-203ENST00000368439 OPA3Q9H6K4 179 aa15.91■□□□□ 0.14
CKS1B-203ENST00000368439 TMEM165Q9HC07 324 aa15.91■□□□□ 0.14
CKS1B-203ENST00000368439 KRT84Q9NSB2 600 aa15.91■□□□□ 0.14
CKS1B-203ENST00000368439 N6AMT1Q9Y5N5 214 aa15.91■□□□□ 0.14
CKS1B-203ENST00000368439 DOCK11Q5JSL3 2073 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms