RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 SLC30A2Q9BRI3 323 aa8.35□□□□□ -1.07
CD48-202ENST00000368046 COPS4Q9BT78 406 aa8.35□□□□□ -1.07
CD48-202ENST00000368046 TMEM160Q9NX00 188 aa8.35□□□□□ -1.07
CD48-202ENST00000368046 TMEFF2Q9UIK5 374 aaPredicted RBP8.35□□□□□ -1.07
CD48-202ENST00000368046 OAZ3Q9UMX2 235 aa8.35□□□□□ -1.07
CD48-202ENST00000368046 CACNG2Q9Y698 323 aa8.35□□□□□ -1.07
CD48-202ENST00000368046 RTTNQ86VV8 2226 aa8.35□□□□□ -1.07
CD48-202ENST00000368046 A0A1B0GWJ7 208 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 CLDN25C9JDP6 229 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 H3BNX3 289 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 WNT9BO14905 357 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 PRKYO43930 277 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 LYNP07948 512 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 H2BFMP0C1H6 154 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 ANPEPP15144 967 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 SLC2A5P22732 501 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 HSD11B1P28845 292 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 EPHA2P29317 976 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 IL2RGP31785 369 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 LMO4P61968 165 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 MVKQ03426 396 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 ZNF92Q03936 586 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 APOFQ13790 326 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 C12orf73Q69YU5 71 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 SPATC1Q76KD6 591 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 MEPCEQ7L2J0 689 aaKnown RBP8.34□□□□□ -1.07
CD48-202ENST00000368046 MRPL21Q7Z2W9 205 aaKnown RBP8.34□□□□□ -1.07
CD48-202ENST00000368046 PEG10Q86TG7 708 aaKnown RBP8.34□□□□□ -1.07
CD48-202ENST00000368046 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.34□□□□□ -1.07
CD48-202ENST00000368046 LINC01356Q8N9X3 169 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 BBS1Q8NFJ9 593 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 CLDND2Q8NHS1 167 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 SPRYD4Q8WW59 207 aaPredicted RBP8.34□□□□□ -1.07
CD48-202ENST00000368046 SGK3Q96BR1 496 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 TIMD4Q96H15 378 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 CIB1Q99828 191 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 PKP2Q99959 881 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 RBM4BQ9BQ04 359 aaKnown RBP8.34□□□□□ -1.07
CD48-202ENST00000368046 SOX7Q9BT81 388 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 YIPF3Q9GZM5 350 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 SLC22A4Q9H015 551 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 TREM2Q9NZC2 230 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 PPP1R3CQ9UQK1 317 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 WIPI2Q9Y4P8 454 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 N6AMT1Q9Y5N5 214 aa8.34□□□□□ -1.07
CD48-202ENST00000368046 CSPG4Q6UVK1 2322 aa8.34□□□□□ -1.08
CD48-202ENST00000368046 HIVEP2P31629 2446 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 NSD1Q96L73 2696 aaPredicted RBP8.33□□□□□ -1.08
CD48-202ENST00000368046 C5orf63A6NC05 138 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 SAC3D1A6NKF1 404 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 CD300LBA8K4G0 201 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 B4DSR2 109 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 H0YL77 283 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 IFNL4K9M1U5 179 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 XRCC2O43543 280 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 SELENOFO60613 162 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 ALOX5APP20292 161 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 IGFBP5P24593 272 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 POLR2IP36954 125 aaKnown RBP8.33□□□□□ -1.08
CD48-202ENST00000368046 DDOSTP39656 456 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 OPRL1P41146 370 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 SRP9P49458 86 aaKnown RBP8.33□□□□□ -1.08
CD48-202ENST00000368046 HCCSP53701 268 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 SNAI3Q3KNW1 292 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 GLYATL3Q5SZD4 288 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 AVPI1Q5T686 147 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 AADACL4Q5VUY2 407 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 NXNL2Q5VZ03 156 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 KCTD18Q6PI47 426 aaPredicted RBP8.33□□□□□ -1.08
CD48-202ENST00000368046 DEGS2Q6QHC5 323 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 SLC16A9Q7RTY1 509 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 CELF2-AS1Q8N7Q2 184 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 TCEANCQ8N8B7 351 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 BHLHE23Q8NDY6 225 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 TMEM163Q8TC26 289 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 ITLN1Q8WWA0 313 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 SPSB4Q96A44 273 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 RAB3IPQ96QF0 476 aaPredicted RBP8.33□□□□□ -1.08
CD48-202ENST00000368046 OR2V2Q96R30 315 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 AMELYQ99218 206 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 BEX2Q9BXY8 128 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 OPA3Q9H6K4 179 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 NARFLQ9H6Q4 476 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 NIPAL2Q9H841 368 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 GCM1Q9NP62 436 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 TMEM106BQ9NUM4 274 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.33□□□□□ -1.08
CD48-202ENST00000368046 LAMP5Q9UJQ1 280 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 CDC42EP3Q9UKI2 254 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 KCNS2Q9ULS6 477 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 TMEM14AQ9Y6G1 99 aa8.33□□□□□ -1.08
CD48-202ENST00000368046 GGT3PA6NGU5 568 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 SLC22A31A6NKX4 558 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 MLNRO43193 412 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 TBX1O43435 398 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 GMDSO60547 372 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 ANXA2P07355 339 aaKnown RBP8.32□□□□□ -1.08
CD48-202ENST00000368046 SLC2A1P11166 492 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 ZNF16P17020 682 aaPredicted RBP8.32□□□□□ -1.08
CD48-202ENST00000368046 DCTDP32321 178 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms