RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 LCN6P62502 163 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 CDK6Q00534 326 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 LRRC74AQ0VAA2 488 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 FHL1Q13642 323 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 OR8B8Q15620 311 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 REEP3Q6NUK4 255 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 TTC33Q6PID6 262 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 SLC2A7Q6PXP3 512 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 HIST3H2AQ7L7L0 130 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 IFT20Q8IY31 132 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 GCSAMQ8N6F7 178 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 FAM216BQ8N7L0 139 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 CELF2-AS1Q8N7Q2 184 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 PCYOX1LQ8NBM8 494 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 OR11L1Q8NGX0 322 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 SLC7A13Q8TCU3 470 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 LRRC8CQ8TDW0 803 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 ADAMTS16Q8TE57 1224 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 AENQ8WTP8 325 aaKnown RBP6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 HIST1H2ACQ93077 130 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 CCL13Q99616 98 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 CDCA4Q9BXL8 241 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 TXNIPQ9H3M7 391 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 TMEM100Q9NV29 134 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 ADA2Q9NZK5 511 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 RNF7Q9UBF6 113 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 CAB39Q9Y376 341 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 LSM4Q9Y4Z0 139 aaKnown RBP6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 TMEM247A6NEH6 219 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 C5orf58C9J3I9 102 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 IMPA2O14732 288 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 RER1O15258 196 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 ANP32DO95626 131 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 ECDO95905 644 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 LHBP01229 141 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 IL6P05231 212 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 CHRM2P08172 466 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 EEF1B2P24534 225 aaKnown RBP6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 RPL14P50914 215 aaKnown RBP6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 UBE2E1P51965 193 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 SLC35A2P78381 396 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 ID3Q02535 119 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 LRRC75BQ2VPJ9 315 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 C6orf10Q5SRN2 563 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 BEND6Q5SZJ8 279 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 GCNT6Q5T4J0 391 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 C10orf99Q6UWK7 81 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 CCDC121Q6ZUS5 278 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 NKAIN4Q8IVV8 208 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 DYNAPQ8N1N2 210 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 LINC00482Q8N8I6 264 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 LRRC75AQ8NAA5 344 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 DRAXINQ8NBI3 349 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 OR1F12Q8NHA8 337 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 TMEM255BQ8WV15 326 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 ITCHQ96J02 903 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 FANCD2OSQ96PS1 177 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 ALG12Q9BV10 488 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 NPFFR1Q9GZQ6 430 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 MEGF9Q9H1U4 602 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 MUC13Q9H3R2 512 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 CENPHQ9H3R5 247 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 TRIM36Q9NQ86 728 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 KAAG1Q9UBP8 84 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 HAO1Q9UJM8 370 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 RAP2CQ9Y3L5 183 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 CAPN7Q9Y6W3 813 aa6.84□□□□□ -1.31
HMGB1P39-201ENST00000366304 TRAPPC13A5PLN9 417 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 NPIPB13A6NJU9 1138 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 NPIPB4C9JG80 1138 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 E9PQ18 207 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 TYROBPO43914 113 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 SLC22A3O75751 556 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 SERPINE1P05121 402 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 CA6P23280 308 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 RAB13P51153 203 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 RPL27P61353 136 aaKnown RBP6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 BLCAPP62952 87 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 FADDQ13158 208 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 SCARB2Q14108 478 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 GK2Q14410 553 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 WDR38Q5JTN6 314 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 INTS11Q5TA45 600 aaKnown RBP6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 TEX36Q5VZQ5 186 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 ZFAND6Q6FIF0 208 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 ADAMTSL5Q6ZMM2 481 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 ETV3LQ6ZN32 361 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 COLCA1Q6ZS62 124 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 WDR86Q86TI4 376 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 NAA40Q86UY6 237 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 TMEM219Q86XT9 240 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 KRT73Q86Y46 540 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 ARMC8Q8IUR7 673 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 C11orf53Q8IXP5 236 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 EIF1ADQ8N9N8 165 aaKnown RBP6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 ERGIC1Q969X5 290 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 RASD2Q96D21 266 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 ZBTB18Q99592 522 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 DCTN5Q9BTE1 182 aa6.83□□□□□ -1.32
HMGB1P39-201ENST00000366304 C1orf123Q9NWV4 160 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms