RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 ATE1O95260 518 aa11.86□□□□□ -0.51
NSMCE1-201ENST00000361439 CD8AP01732 235 aa11.86□□□□□ -0.51
NSMCE1-201ENST00000361439 MT-ND5P03915 603 aa11.86□□□□□ -0.51
NSMCE1-201ENST00000361439 SOD3P08294 240 aa11.86□□□□□ -0.51
NSMCE1-201ENST00000361439 CD53P19397 219 aa11.86□□□□□ -0.51
NSMCE1-201ENST00000361439 CRHBPP24387 322 aa11.86□□□□□ -0.51
NSMCE1-201ENST00000361439 DNASE1P24855 282 aa11.86□□□□□ -0.51
NSMCE1-201ENST00000361439 PPOXP50336 477 aa11.86□□□□□ -0.51
NSMCE1-201ENST00000361439 ERVS71-1P61550 626 aa11.86□□□□□ -0.51
NSMCE1-201ENST00000361439 SLC35A2P78381 396 aa11.86□□□□□ -0.51
NSMCE1-201ENST00000361439 ZMAT1Q5H9K5 638 aa11.86□□□□□ -0.51
NSMCE1-201ENST00000361439 FDX2Q6P4F2 183 aa11.86□□□□□ -0.51
NSMCE1-201ENST00000361439 PGAP1Q75T13 922 aa11.86□□□□□ -0.51
NSMCE1-201ENST00000361439 NAA40Q86UY6 237 aa11.86□□□□□ -0.51
NSMCE1-201ENST00000361439 REPIN1Q9BWE0 567 aaKnown RBP11.86□□□□□ -0.51
NSMCE1-201ENST00000361439 OR51B6Q9H340 312 aa11.86□□□□□ -0.51
NSMCE1-201ENST00000361439 MS4A5Q9H3V2 200 aa11.86□□□□□ -0.51
NSMCE1-201ENST00000361439 DUSP21Q9H596 190 aa11.86□□□□□ -0.51
NSMCE1-201ENST00000361439 DUSP13Q9UII6 198 aa11.86□□□□□ -0.51
NSMCE1-201ENST00000361439 GNG8Q9UK08 70 aa11.86□□□□□ -0.51
NSMCE1-201ENST00000361439 PCDHGB5Q9Y5G0 923 aa11.86□□□□□ -0.51
NSMCE1-201ENST00000361439 TMEM129A0AVI4 362 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 LOC110117498-PIK3R3F6TDL0 507 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 H7C417 338 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 PSMD9O00233 223 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 MRPS14O60783 128 aaKnown RBP11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 CDK1P06493 297 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 LIMS3P0CW19 117 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 LIMS4P0CW20 117 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 ATP6V1B1P15313 513 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 DDOSTP39656 456 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 CCR9P51686 369 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 OR12D2P58182 307 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 PSG7Q13046 419 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 GK2Q14410 553 aaPredicted RBP11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 MSMPQ1L6U9 139 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 SNAI3Q3KNW1 292 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 CCDC58Q4VC31 144 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 SPATA46Q5T0L3 261 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 AHSA2Q719I0 299 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 FAM57BQ71RH2 274 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 LHFPL3Q86UP9 236 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 ELMOD2Q8IZ81 293 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 KLHL36Q8N4N3 616 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 CCDC54Q8NEL0 328 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 OR52N1Q8NH53 320 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 CMBLQ96DG6 245 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 PGAM5Q96HS1 289 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 SIGLEC11Q96RL6 698 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 CDCA4Q9BXL8 241 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 PBOV1Q9GZY1 135 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 BEX4Q9NWD9 120 aaPredicted RBP11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 AKAP6Q13023 2319 aa11.85□□□□□ -0.51
NSMCE1-201ENST00000361439 SETXQ7Z333 2677 aaKnown RBP11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 LRBAP50851 2863 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 LOC390937A0A1W2PQ73 354 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 PLSCR5A0PG75 271 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 J3QLW9 94 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 M0R233 179 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 TBX1O43435 398 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 SLC2A1P11166 492 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 ZNF19P17023 458 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 TGM4P49221 684 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 GABARAPL2P60520 117 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 ZNF92Q03936 586 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 TIGD6Q17RP2 521 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 FAM209AQ5JX71 171 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 GLYATL3Q5SZD4 288 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 BCL2L15Q5TBC7 163 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 MRPL21Q7Z2W9 205 aaKnown RBP11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 CATSPERDQ86XM0 798 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 LRRC75A-AS1Q8N1F1 130 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 ZNF786Q8N393 782 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 RORBQ92753 470 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 SGK3Q96BR1 496 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 TRMT61AQ96FX7 289 aaKnown RBP11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 REEP6Q96HR9 211 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 C4orf36Q96KX1 117 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 DIRC2Q96SL1 478 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 SYT3Q9BQG1 590 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 TTTY10Q9BZA0 68 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 SLC22A4Q9H015 551 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 G6PC2Q9NQR9 355 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 ACOXLQ9NUZ1 547 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 ZNF701Q9NV72 531 aaPredicted RBP11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 UBAP1Q9NZ09 502 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 TAAR3PQ9P1P4 343 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 PURGQ9UJV8 347 aaKnown RBP11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 OR52A1Q9UKL2 312 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 ERGIC3Q9Y282 383 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 POLQO75417 2590 aa11.84□□□□□ -0.51
NSMCE1-201ENST00000361439 ANKRD17O75179 2603 aaKnown RBP11.83□□□□□ -0.52
NSMCE1-201ENST00000361439 A0A1W2PPW3 197 aa11.83□□□□□ -0.52
NSMCE1-201ENST00000361439 DHRS7CA6NNS2 312 aa11.83□□□□□ -0.52
NSMCE1-201ENST00000361439 IQCF6A8MYZ5 107 aa11.83□□□□□ -0.52
NSMCE1-201ENST00000361439 PTGES3LE9PB15 166 aa11.83□□□□□ -0.52
NSMCE1-201ENST00000361439 RPP14O95059 124 aaKnown RBP11.83□□□□□ -0.52
NSMCE1-201ENST00000361439 CLPTM1O96005 669 aa11.83□□□□□ -0.52
NSMCE1-201ENST00000361439 PNPP00491 289 aa11.83□□□□□ -0.52
NSMCE1-201ENST00000361439 IGLV3-1P01715 115 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms