RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 UBE2QL1A1L167 161 aa11.65□□□□□ -0.55
SQSTM1-201ENST00000360718 PRR32B1ATL7 298 aa11.65□□□□□ -0.55
SQSTM1-201ENST00000360718 XRCC3O43542 346 aa11.65□□□□□ -0.55
SQSTM1-201ENST00000360718 MPC2O95563 127 aa11.65□□□□□ -0.55
SQSTM1-201ENST00000360718 IGHG1P01857 330 aa11.65□□□□□ -0.55
SQSTM1-201ENST00000360718 ITGB2P05107 769 aa11.65□□□□□ -0.55
SQSTM1-201ENST00000360718 MAGEB1P43366 347 aa11.65□□□□□ -0.55
SQSTM1-201ENST00000360718 CLRN1P58418 232 aa11.65□□□□□ -0.55
SQSTM1-201ENST00000360718 DHODHQ02127 395 aa11.65□□□□□ -0.55
SQSTM1-201ENST00000360718 OPCMLQ14982 345 aa11.65□□□□□ -0.55
SQSTM1-201ENST00000360718 LINC00303Q3SY05 128 aa11.65□□□□□ -0.55
SQSTM1-201ENST00000360718 TMEM255AQ5JRV8 349 aa11.65□□□□□ -0.55
SQSTM1-201ENST00000360718 ZNF626Q68DY1 528 aa11.65□□□□□ -0.55
SQSTM1-201ENST00000360718 COMMD7Q86VX2 200 aa11.65□□□□□ -0.55
SQSTM1-201ENST00000360718 OR6N2Q8NGY6 317 aa11.65□□□□□ -0.55
SQSTM1-201ENST00000360718 OR2G2Q8NGZ5 317 aa11.65□□□□□ -0.55
SQSTM1-201ENST00000360718 OR10D3Q8NH80 312 aa11.65□□□□□ -0.55
SQSTM1-201ENST00000360718 LRRC20Q8TCA0 184 aa11.65□□□□□ -0.55
SQSTM1-201ENST00000360718 SLC25A44Q96H78 314 aaPredicted RBP11.65□□□□□ -0.55
SQSTM1-201ENST00000360718 KCNK17Q96T54 332 aa11.65□□□□□ -0.55
SQSTM1-201ENST00000360718 EMC6Q9BV81 110 aa11.65□□□□□ -0.55
SQSTM1-201ENST00000360718 SRXN1Q9BYN0 137 aa11.65□□□□□ -0.55
SQSTM1-201ENST00000360718 CHIAQ9BZP6 476 aa11.65□□□□□ -0.55
SQSTM1-201ENST00000360718 CACNA1AO00555 2505 aa11.65□□□□□ -0.55
SQSTM1-201ENST00000360718 PHF3Q92576 2039 aaKnown RBP11.64□□□□□ -0.55
SQSTM1-201ENST00000360718 TRBV5-7A0A0A0MS05 114 aa11.64□□□□□ -0.55
SQSTM1-201ENST00000360718 IGHV3-15A0A0B4J1V0 119 aa11.64□□□□□ -0.55
SQSTM1-201ENST00000360718 I3L521 148 aa11.64□□□□□ -0.55
SQSTM1-201ENST00000360718 TRAF3IP2O43734 574 aaPredicted RBP11.64□□□□□ -0.55
SQSTM1-201ENST00000360718 CXCL13O43927 109 aa11.64□□□□□ -0.55
SQSTM1-201ENST00000360718 ABHD16AO95870 558 aa11.64□□□□□ -0.55
SQSTM1-201ENST00000360718 ACTL6AO96019 429 aa11.64□□□□□ -0.55
SQSTM1-201ENST00000360718 CSF1P09603 554 aa11.64□□□□□ -0.55
SQSTM1-201ENST00000360718 ALOX5APP20292 161 aa11.64□□□□□ -0.55
SQSTM1-201ENST00000360718 GLO1Q04760 184 aa11.64□□□□□ -0.55
SQSTM1-201ENST00000360718 DNM1P46Q6ZS02 220 aa11.64□□□□□ -0.55
SQSTM1-201ENST00000360718 OR6X1Q8NH79 312 aa11.64□□□□□ -0.55
SQSTM1-201ENST00000360718 THEM6Q8WUY1 208 aa11.64□□□□□ -0.55
SQSTM1-201ENST00000360718 CPNE4Q96A23 557 aaPredicted RBP11.64□□□□□ -0.55
SQSTM1-201ENST00000360718 UCN2Q96RP3 112 aa11.64□□□□□ -0.55
SQSTM1-201ENST00000360718 INTS14Q96SY0 518 aa11.64□□□□□ -0.55
SQSTM1-201ENST00000360718 SEC22CQ9BRL7 303 aa11.64□□□□□ -0.55
SQSTM1-201ENST00000360718 SF3B5Q9BWJ5 86 aaKnown RBP11.64□□□□□ -0.55
SQSTM1-201ENST00000360718 TMPRSS13Q9BYE2 586 aa11.64□□□□□ -0.55
SQSTM1-201ENST00000360718 KLHL13Q9P2N7 655 aa11.64□□□□□ -0.55
SQSTM1-201ENST00000360718 KLHDC2Q9Y2U9 406 aa11.64□□□□□ -0.55
SQSTM1-201ENST00000360718 LIPGQ9Y5X9 500 aa11.64□□□□□ -0.55
SQSTM1-201ENST00000360718 RPS10-NUDT3A0A1W2PQS6 291 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 OR4C45A6NMZ5 311 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 L7N2F9 121 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 WISP2O76076 250 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 NR2C1P13056 603 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 ADRA2CP18825 462 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 DCTDP32321 178 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 CLDN17P56750 224 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 RBMS2Q15434 407 aaKnown RBP11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 DNAAF1Q8NEP3 725 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 ADGRG7Q96K78 797 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 DKK4Q9UBT3 224 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 KIF25Q9UIL4 384 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 TVP23AA6NH52 213 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 G3V3Q6 166 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 H7C417 338 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 OR2A4O95047 310 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 MAS1P04201 325 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 ALDOBP05062 364 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 CTLA4P16410 223 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 LHX2P50458 406 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 THEM4Q5T1C6 240 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 OR9K2Q8NGE7 335 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 TMEM106AQ96A25 262 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 OR2A7Q96R45 310 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 DEFB127Q9H1M4 99 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 MTFP1Q9UDX5 166 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 PIEZO2Q9H5I5 2752 aa11.63□□□□□ -0.55
SQSTM1-201ENST00000360718 BSNQ9UPA5 3926 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 IGLV1-36A0A0B4J1U3 117 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 SMAD9O15198 467 aaKnown RBP11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 RRASP10301 218 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 ANXA7P20073 488 aaKnown RBP11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 NFYAP23511 347 aaPredicted RBP11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 ID4P47928 161 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 SRYQ05066 204 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 ANKRD16Q6P6B7 361 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 IGFL3Q6UXB1 125 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 CHMP1BQ7LBR1 199 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 DPY19L4Q7Z388 723 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 NOXO1Q8NFA2 376 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 ASB17Q8WXJ9 295 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 PNPLA2Q96AD5 504 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 PIPOXQ9P0Z9 390 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 RAXQ9Y2V3 346 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 SPEF1Q9Y4P9 236 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 TRGV5A0A0B4J1U4 118 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 PLSCR5A0PG75 271 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 ZNF708P17019 499 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 CFPP27918 469 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 CLDN18P56856 261 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 SLC17A1Q14916 467 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 AANATQ16613 207 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms