RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 GNG12Q9UBI6 72 aa13.15□□□□□ -0.3
SLC6A20-202ENST00000358525 A0A087WZY1 265 aa13.15□□□□□ -0.3
SLC6A20-202ENST00000358525 C5orf49A4QMS7 147 aa13.15□□□□□ -0.3
SLC6A20-202ENST00000358525 MRPS34P82930 218 aaKnown RBP13.15□□□□□ -0.3
SLC6A20-202ENST00000358525 ZXDCQ2QGD7 858 aaPredicted RBP13.15□□□□□ -0.3
SLC6A20-202ENST00000358525 PAN3Q58A45 887 aaKnown RBP13.15□□□□□ -0.3
SLC6A20-202ENST00000358525 ELFN2Q5R3F8 820 aa13.15□□□□□ -0.3
SLC6A20-202ENST00000358525 LYG2Q86SG7 212 aa13.15□□□□□ -0.3
SLC6A20-202ENST00000358525 WDR89Q96FK6 387 aaPredicted RBP13.15□□□□□ -0.3
SLC6A20-202ENST00000358525 KIRREL1Q96J84 757 aa13.15□□□□□ -0.3
SLC6A20-202ENST00000358525 PCED1AQ9H1Q7 454 aa13.15□□□□□ -0.3
SLC6A20-202ENST00000358525 FBXO4Q9UKT5 387 aa13.15□□□□□ -0.3
SLC6A20-202ENST00000358525 TMEM272A0A1B0GTI8 110 aa13.15□□□□□ -0.3
SLC6A20-202ENST00000358525 MGMTP16455 207 aa13.15□□□□□ -0.3
SLC6A20-202ENST00000358525 OR52W1Q6IF63 320 aa13.15□□□□□ -0.3
SLC6A20-202ENST00000358525 TMEM229BQ8NBD8 167 aa13.15□□□□□ -0.3
SLC6A20-202ENST00000358525 OR51A4Q8NGJ6 313 aa13.15□□□□□ -0.3
SLC6A20-202ENST00000358525 MED30Q96HR3 178 aa13.15□□□□□ -0.3
SLC6A20-202ENST00000358525 DUSP13Q9UII6 198 aa13.15□□□□□ -0.3
SLC6A20-202ENST00000358525 IGHV3-64DA0A0J9YX35 117 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 A0A1W2PQF6 199 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 DEGS1O15121 323 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 TGM6O95932 706 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 NXPH1P58417 271 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 NKX6-1P78426 367 aaPredicted RBP13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 SLC25A30Q5SVS4 291 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 LHFPL2Q6ZUX7 228 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 KCNRGQ8N5I3 272 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 DMBX1Q8NFW5 382 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 KCNE4Q8WWG9 221 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 SLC23A1Q9UHI7 598 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 D6RAR5 112 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 ZNF321PQ8N8H1 164 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 PLPP5Q8NEB5 264 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 OR51H1Q8NH63 302 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 TMED6Q8WW62 240 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 C1QTNF6Q9BXI9 259 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 A0A1W2PPV4 95 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 MPZL1O95297 269 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 CLDN1O95832 211 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 MT-CO2P00403 227 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 SEMG1P04279 462 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 SSBP1Q04837 148 aaKnown RBP13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 ALKBH3Q96Q83 286 aaPredicted RBP13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 TIMM8BQ9Y5J9 83 aaPredicted RBP13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 ARGFXA6NJG6 315 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 CBR3O75828 277 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 CTLA4P16410 223 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 RAB4BP61018 213 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 SNTB1Q13884 538 aaKnown RBP13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 TEX261Q6UWH6 196 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 U3KQ87 197 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 BRCA1P38398 1863 aaKnown RBP13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 NDUFB6O95139 128 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 EIF2S3LQ2VIR3 472 aaKnown RBP13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 C1QL3Q5VWW1 255 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 TFAP2EQ6VUC0 442 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 AKR7LQ8NHP1 331 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 SEH1LQ96EE3 360 aa13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 MRM2Q9UI43 246 aaKnown RBP13.14□□□□□ -0.31
SLC6A20-202ENST00000358525 UBE2KP61086 200 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 GCM1Q9NP62 436 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 HAO2Q9NYQ3 351 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 EFSO43281 561 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 RGS11O94810 467 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 ZNF266Q14584 549 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 FAM74A1Q5RGS3 127 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 PPP1R1CQ8WVI7 109 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 FAM234AQ9H0X4 552 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 PCOLCE2Q9UKZ9 415 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 FLVCR1Q9Y5Y0 555 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 SLCO1B1Q9Y6L6 691 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 RPS10-NUDT3A0A1W2PQS6 291 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 SPRY1O43609 319 aaPredicted RBP13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 TBPP20226 339 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 RPS10P46783 165 aaKnown RBP13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 DSCR4P56555 118 aaPredicted RBP13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 IFITM3Q01628 133 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 ETFDHQ16134 617 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 ZBTB37Q5TC79 503 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 OR10J5Q8NHC4 309 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 GNRHR2Q96P88 292 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 SSX3Q99909 188 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 MARVELD1Q9BSK0 173 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 PIGMQ9H3S5 423 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 MYOTQ9UBF9 498 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 PLPP3O14495 311 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 CTAG2O75638 210 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 GSTP1P09211 210 aaKnown RBP13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 ATPAF1Q5TC12 328 aaPredicted RBP13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 UBALD2Q8IYN6 164 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 DEFB123Q8N688 67 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 NPEPL1Q8NDH3 523 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 CMBLQ96DG6 245 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 MALSU1Q96EH3 234 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 SCN10AQ9Y5Y9 1956 aa13.13□□□□□ -0.31
SLC6A20-202ENST00000358525 KIR2DS1A0A191URI9 304 aa13.12□□□□□ -0.31
SLC6A20-202ENST00000358525 RER1O15258 196 aa13.12□□□□□ -0.31
SLC6A20-202ENST00000358525 IFNA4P05014 189 aa13.12□□□□□ -0.31
SLC6A20-202ENST00000358525 KIR2DS4P43632 304 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms