RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 BCL2L15Q5TBC7 163 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 RDH10Q8IZV5 341 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 SGK3Q96BR1 496 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 OR2J1Q9GZK6 312 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 TRIM36Q9NQ86 728 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 PLEKHB1Q9UF11 243 aaPredicted RBP21.85■■□□□ 1.09
SSBP3-202ENST00000357475 COX6B1P14854 86 aa21.84■■□□□ 1.09
SSBP3-202ENST00000357475 THBS4P35443 961 aa21.84■■□□□ 1.09
SSBP3-202ENST00000357475 TGM4P49221 684 aa21.84■■□□□ 1.09
SSBP3-202ENST00000357475 CDK5R1Q15078 307 aa21.84■■□□□ 1.09
SSBP3-202ENST00000357475 UBE2UQ5VVX9 321 aa21.84■■□□□ 1.09
SSBP3-202ENST00000357475 ZNF367Q7RTV3 350 aa21.84■■□□□ 1.09
SSBP3-202ENST00000357475 EGFL6Q8IUX8 553 aa21.84■■□□□ 1.09
SSBP3-202ENST00000357475 SLC25A40Q8TBP6 338 aa21.84■■□□□ 1.09
SSBP3-202ENST00000357475 RPS4Y2Q8TD47 263 aa21.84■■□□□ 1.09
SSBP3-202ENST00000357475 OPALINQ96PE5 141 aa21.84■■□□□ 1.09
SSBP3-202ENST00000357475 PDCD1LG2Q9BQ51 273 aa21.84■■□□□ 1.09
SSBP3-202ENST00000357475 OR4C45A6NMZ5 311 aa21.83■■□□□ 1.09
SSBP3-202ENST00000357475 E7EQL1 145 aa21.83■■□□□ 1.09
SSBP3-202ENST00000357475 P2RY10O00398 339 aa21.83■■□□□ 1.09
SSBP3-202ENST00000357475 OGG1O15527 345 aa21.83■■□□□ 1.09
SSBP3-202ENST00000357475 RGS6P49758 472 aa21.83■■□□□ 1.09
SSBP3-202ENST00000357475 ZNF92Q03936 586 aa21.83■■□□□ 1.09
SSBP3-202ENST00000357475 ARL9Q6T311 187 aa21.83■■□□□ 1.09
SSBP3-202ENST00000357475 ZNF704Q6ZNC4 412 aaPredicted RBP21.83■■□□□ 1.09
SSBP3-202ENST00000357475 ELMOD2Q8IZ81 293 aa21.83■■□□□ 1.09
SSBP3-202ENST00000357475 OR51E1Q8TCB6 317 aa21.83■■□□□ 1.09
SSBP3-202ENST00000357475 TMEM171Q8WVE6 324 aa21.83■■□□□ 1.09
SSBP3-202ENST00000357475 MGLLQ99685 303 aa21.83■■□□□ 1.09
SSBP3-202ENST00000357475 POU2F3Q9UKI9 436 aa21.83■■□□□ 1.09
SSBP3-202ENST00000357475 TRBV2A0A0J9YWF9 115 aa21.82■■□□□ 1.08
SSBP3-202ENST00000357475 ZFPL1O95159 310 aa21.82■■□□□ 1.08
SSBP3-202ENST00000357475 MPV17P39210 176 aa21.82■■□□□ 1.08
SSBP3-202ENST00000357475 RAD52P43351 418 aa21.82■■□□□ 1.08
SSBP3-202ENST00000357475 SLC3A1Q07837 685 aa21.82■■□□□ 1.08
SSBP3-202ENST00000357475 ACSM1Q08AH1 577 aa21.82■■□□□ 1.08
SSBP3-202ENST00000357475 DMKNQ6E0U4 476 aaPredicted RBP21.82■■□□□ 1.08
SSBP3-202ENST00000357475 RPL22L1Q6P5R6 122 aaKnown RBP21.82■■□□□ 1.08
SSBP3-202ENST00000357475 NUP37Q8NFH4 326 aa21.82■■□□□ 1.08
SSBP3-202ENST00000357475 OR10AC1Q8NH08 325 aa21.82■■□□□ 1.08
SSBP3-202ENST00000357475 MARS2Q96GW9 593 aaKnown RBP21.82■■□□□ 1.08
SSBP3-202ENST00000357475 OR10A2Q9H208 303 aa21.82■■□□□ 1.08
SSBP3-202ENST00000357475 MOB1AQ9H8S9 216 aa21.82■■□□□ 1.08
SSBP3-202ENST00000357475 SLC24A3Q9HC58 644 aa21.82■■□□□ 1.08
SSBP3-202ENST00000357475 CA10Q9NS85 328 aa21.82■■□□□ 1.08
SSBP3-202ENST00000357475 CELP19835 753 aa21.81■■□□□ 1.08
SSBP3-202ENST00000357475 GK2Q14410 553 aaPredicted RBP21.81■■□□□ 1.08
SSBP3-202ENST00000357475 OR52H1Q8NGJ2 320 aa21.81■■□□□ 1.08
SSBP3-202ENST00000357475 COG8Q96MW5 612 aa21.81■■□□□ 1.08
SSBP3-202ENST00000357475 GPR84Q9NQS5 396 aa21.81■■□□□ 1.08
SSBP3-202ENST00000357475 A0A1B0GTI1 187 aa21.8■■□□□ 1.08
SSBP3-202ENST00000357475 FAM221AA4D161 298 aa21.8■■□□□ 1.08
SSBP3-202ENST00000357475 ACOD1A6NK06 481 aa21.8■■□□□ 1.08
SSBP3-202ENST00000357475 IGLV3-1P01715 115 aa21.8■■□□□ 1.08
SSBP3-202ENST00000357475 PSMB9P28065 219 aa21.8■■□□□ 1.08
SSBP3-202ENST00000357475 GLRXP35754 106 aa21.8■■□□□ 1.08
SSBP3-202ENST00000357475 CCR9P51686 369 aa21.8■■□□□ 1.08
SSBP3-202ENST00000357475 GP2P55259 537 aaKnown RBP21.8■■□□□ 1.08
SSBP3-202ENST00000357475 MRPL28Q13084 256 aaKnown RBP21.8■■□□□ 1.08
SSBP3-202ENST00000357475 TIGD6Q17RP2 521 aa21.8■■□□□ 1.08
SSBP3-202ENST00000357475 CCDC58Q4VC31 144 aa21.8■■□□□ 1.08
SSBP3-202ENST00000357475 LRP11Q86VZ4 500 aa21.8■■□□□ 1.08
SSBP3-202ENST00000357475 ZNF295-AS1Q8N0V1 137 aa21.8■■□□□ 1.08
SSBP3-202ENST00000357475 RGP1Q92546 391 aaPredicted RBP21.8■■□□□ 1.08
SSBP3-202ENST00000357475 MUL1Q969V5 352 aa21.8■■□□□ 1.08
SSBP3-202ENST00000357475 REEP6Q96HR9 211 aa21.8■■□□□ 1.08
SSBP3-202ENST00000357475 PGLYRP3Q96LB9 341 aa21.8■■□□□ 1.08
SSBP3-202ENST00000357475 BCL2L14Q9BZR8 327 aa21.8■■□□□ 1.08
SSBP3-202ENST00000357475 SPEF1Q9Y4P9 236 aa21.8■■□□□ 1.08
SSBP3-202ENST00000357475 ATE1O95260 518 aa21.8■■□□□ 1.08
SSBP3-202ENST00000357475 FABP6P51161 128 aa21.8■■□□□ 1.08
SSBP3-202ENST00000357475 MLLT11Q13015 90 aaPredicted RBP21.8■■□□□ 1.08
SSBP3-202ENST00000357475 TSTQ16762 297 aaKnown RBP21.8■■□□□ 1.08
SSBP3-202ENST00000357475 ZNF672Q499Z4 452 aaPredicted RBP21.8■■□□□ 1.08
SSBP3-202ENST00000357475 ARMCX4Q5H9R4 360 aa21.8■■□□□ 1.08
SSBP3-202ENST00000357475 LIPKQ5VXJ0 399 aa21.8■■□□□ 1.08
SSBP3-202ENST00000357475 OR13C5Q8NGS8 318 aa21.8■■□□□ 1.08
SSBP3-202ENST00000357475 KLF14Q8TD94 323 aaPredicted RBP21.8■■□□□ 1.08
SSBP3-202ENST00000357475 AKAP1Q92667 903 aaKnown RBP eCLIP21.8■■□□□ 1.08
SSBP3-202ENST00000357475 SMIM19Q96E16 107 aa21.8■■□□□ 1.08
SSBP3-202ENST00000357475 PTPN13Q12923 2485 aa21.79■■□□□ 1.08
SSBP3-202ENST00000357475 LMX1BO60663 402 aa21.79■■□□□ 1.08
SSBP3-202ENST00000357475 CLPTM1O96005 669 aa21.79■■□□□ 1.08
SSBP3-202ENST00000357475 MAGEB1P43366 347 aa21.79■■□□□ 1.08
SSBP3-202ENST00000357475 BDH1Q02338 343 aa21.79■■□□□ 1.08
SSBP3-202ENST00000357475 TNK1Q13470 666 aa21.79■■□□□ 1.08
SSBP3-202ENST00000357475 SSX1Q16384 188 aa21.79■■□□□ 1.08
SSBP3-202ENST00000357475 ALKBH6Q3KRA9 238 aa21.79■■□□□ 1.08
SSBP3-202ENST00000357475 RGS7BPQ6MZT1 257 aaPredicted RBP21.79■■□□□ 1.08
SSBP3-202ENST00000357475 OR51A4Q8NGJ6 313 aa21.79■■□□□ 1.08
SSBP3-202ENST00000357475 OR5AK2Q8NH90 309 aa21.79■■□□□ 1.08
SSBP3-202ENST00000357475 FCGR1BQ92637 280 aa21.79■■□□□ 1.08
SSBP3-202ENST00000357475 GHSRQ92847 366 aa21.79■■□□□ 1.08
SSBP3-202ENST00000357475 SPSB4Q96A44 273 aa21.79■■□□□ 1.08
SSBP3-202ENST00000357475 CMBLQ96DG6 245 aa21.79■■□□□ 1.08
SSBP3-202ENST00000357475 FAM71F1Q96KD3 344 aaPredicted RBP21.79■■□□□ 1.08
SSBP3-202ENST00000357475 MRPS26Q9BYN8 205 aaKnown RBP21.79■■□□□ 1.08
SSBP3-202ENST00000357475 SP140LQ9H930 580 aa21.79■■□□□ 1.08
SSBP3-202ENST00000357475 MYEF2Q9P2K5 600 aaKnown RBP21.79■■□□□ 1.08
SSBP3-202ENST00000357475 CELSR2Q9HCU4 2923 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms