RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 C9orf170A2RU37 121 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 HSPB2A8KAH6 182 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 TNFSF12O43508 249 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 TMEM127O75204 238 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 RGS19P49795 217 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 ZNF84P51523 738 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 PDZK1IP1Q13113 114 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 STK11Q15831 433 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 HSPB2Q16082 182 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 PDSS1Q5T2R2 415 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 RGS7BPQ6MZT1 257 aaPredicted RBP6.11□□□□□ -1.43
RTN4-203ENST00000357376 OR6K3Q8NGY3 331 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 WNT2BQ93097 391 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 NMNAT2Q9BZQ4 307 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 FAM96BQ9Y3D0 163 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 RP1P56715 2156 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 SNRNP200O75643 2136 aaKnown RBP6.11□□□□□ -1.43
RTN4-203ENST00000357376 FAM221AA4D161 298 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 MFSD2BA6NFX1 497 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 METTL12A8MUP2 240 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 C1orf196B1AJZ1 125 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 ALG1L2C9J202 215 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 PLPP3O14495 311 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 RER1O15258 196 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 MTRF1O75570 445 aaKnown RBP6.11□□□□□ -1.43
RTN4-203ENST00000357376 SCRG1O75711 98 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 KLK3P07288 261 aaPredicted RBP6.11□□□□□ -1.43
RTN4-203ENST00000357376 QDPRP09417 244 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 CSF2RBP32927 897 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 PNLIPRP2P54317 469 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 MTCP1P56278 107 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 PRSS12P56730 875 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 ZNF121P58317 390 aaPredicted RBP6.11□□□□□ -1.43
RTN4-203ENST00000357376 PEA15Q15121 130 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 MPPED2Q15777 294 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 EXOSC6Q5RKV6 272 aaKnown RBP6.11□□□□□ -1.43
RTN4-203ENST00000357376 HSD17B13Q7Z5P4 300 aaPredicted RBP6.11□□□□□ -1.43
RTN4-203ENST00000357376 ZNF565Q8N9K5 539 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 HSD17B11Q8NBQ5 300 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 SLAMF9Q96A28 289 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 KLK13Q9UKR3 277 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 TMEM184BQ9Y519 407 aaPredicted RBP6.11□□□□□ -1.43
RTN4-203ENST00000357376 PCDHGA1Q9Y5H4 931 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 ASXL3Q9C0F0 2248 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 HELZP42694 1942 aaKnown RBP6.11□□□□□ -1.43
RTN4-203ENST00000357376 SSX5O60225 188 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 RAD51DO75771 328 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 ATG12O94817 140 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 F12P00748 615 aaPredicted RBP6.11□□□□□ -1.43
RTN4-203ENST00000357376 CHRM2P08172 466 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 FOLR1P15328 257 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 GNRHRP30968 328 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 OPRM1P35372 400 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 RNF4P78317 190 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 SSBP1Q04837 148 aaKnown RBP6.11□□□□□ -1.43
RTN4-203ENST00000357376 GNMTQ14749 295 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 PHLDA2Q53GA4 152 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 STPG1Q5TH74 334 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 RAB11FIP2Q7L804 512 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 FAM122BQ7Z309 247 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 CBLN2Q8IUK8 224 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 ADAD2Q8NCV1 583 aaKnown RBP6.11□□□□□ -1.43
RTN4-203ENST00000357376 OR1N1Q8NGS0 311 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 OR1L3Q8NH93 324 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 BORCS8Q96FH0 119 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 TMPRSS13Q9BYE2 586 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 FOXQ1Q9C009 403 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 SLC5A7Q9GZV3 580 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 ZCCHC4Q9H5U6 513 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 TAF9BQ9HBM6 251 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.11□□□□□ -1.432e-7■■■□□ 17.5
RTN4-203ENST00000357376 VSIG4Q9Y279 399 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 PLXNB3Q9ULL4 1909 aa6.11□□□□□ -1.43
RTN4-203ENST00000357376 IGHV3-15A0A0B4J1V0 119 aa6.1□□□□□ -1.43
RTN4-203ENST00000357376 A6NCN8 305 aa6.1□□□□□ -1.43
RTN4-203ENST00000357376 C9J4A7 227 aa6.1□□□□□ -1.43
RTN4-203ENST00000357376 ZNF354AO60765 605 aaPredicted RBP6.1□□□□□ -1.43
RTN4-203ENST00000357376 ZFAND5O76080 213 aa6.1□□□□□ -1.43
RTN4-203ENST00000357376 BGLAPP02818 100 aa6.1□□□□□ -1.43
RTN4-203ENST00000357376 CD1AP06126 327 aa6.1□□□□□ -1.43
RTN4-203ENST00000357376 IGHV4-34P06331 123 aa6.1□□□□□ -1.43
RTN4-203ENST00000357376 OMGP23515 440 aa6.1□□□□□ -1.43
RTN4-203ENST00000357376 LAP3P28838 519 aa6.1□□□□□ -1.43
RTN4-203ENST00000357376 SCAND1P57086 179 aa6.1□□□□□ -1.43
RTN4-203ENST00000357376 TAS2R46P59540 309 aa6.1□□□□□ -1.43
RTN4-203ENST00000357376 C5orf46Q6UWT4 87 aa6.1□□□□□ -1.43
RTN4-203ENST00000357376 OR10Z1Q8NGY1 313 aa6.1□□□□□ -1.43
RTN4-203ENST00000357376 TERB2Q8NHR7 220 aa6.1□□□□□ -1.43
RTN4-203ENST00000357376 FLVCR1-AS1Q8TAF5 88 aa6.1□□□□□ -1.43
RTN4-203ENST00000357376 ARHGAP5-AS1Q96IT6 56 aa6.1□□□□□ -1.43
RTN4-203ENST00000357376 GPX7Q96SL4 187 aaPredicted RBP6.1□□□□□ -1.43
RTN4-203ENST00000357376 NICN1Q9BSH3 213 aa6.1□□□□□ -1.43
RTN4-203ENST00000357376 ULBP2Q9BZM5 246 aa6.1□□□□□ -1.43
RTN4-203ENST00000357376 BIN3Q9NQY0 253 aa6.1□□□□□ -1.43
RTN4-203ENST00000357376 SLC17A5Q9NRA2 495 aa6.1□□□□□ -1.43
RTN4-203ENST00000357376 SRPK3Q9UPE1 567 aa6.1□□□□□ -1.43
RTN4-203ENST00000357376 FAM74A7A6NL05 159 aa6.1□□□□□ -1.43
RTN4-203ENST00000357376 RBMXL2O75526 392 aaKnown RBP6.1□□□□□ -1.43
RTN4-203ENST00000357376 OR2A4O95047 310 aa6.1□□□□□ -1.43
RTN4-203ENST00000357376 CD27P26842 260 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms