RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 SLC6A9P48067 706 aa15.78■□□□□ 0.12
SMARCD3-202ENST00000356800 SOX2P48431 317 aa15.78■□□□□ 0.12
SMARCD3-202ENST00000356800 ZNF846Q147U1 533 aa15.78■□□□□ 0.12
SMARCD3-202ENST00000356800 GSG1Q2KHT4 349 aa15.78■□□□□ 0.12
SMARCD3-202ENST00000356800 CEP78Q5JTW2 689 aa15.78■□□□□ 0.12
SMARCD3-202ENST00000356800 DRAM2Q6UX65 266 aa15.78■□□□□ 0.12
SMARCD3-202ENST00000356800 KCTD12Q96CX2 325 aaKnown RBP15.78■□□□□ 0.12
SMARCD3-202ENST00000356800 SLC24A3Q9HC58 644 aa15.78■□□□□ 0.12
SMARCD3-202ENST00000356800 DHDHQ9UQ10 334 aa15.78■□□□□ 0.12
SMARCD3-202ENST00000356800 NBASA2RRP1 2371 aa15.77■□□□□ 0.12
SMARCD3-202ENST00000356800 A8MXE2 369 aa15.77■□□□□ 0.12
SMARCD3-202ENST00000356800 PDCD5O14737 125 aa15.77■□□□□ 0.12
SMARCD3-202ENST00000356800 COX5BP10606 129 aa15.77■□□□□ 0.12
SMARCD3-202ENST00000356800 ETV6P41212 452 aa15.77■□□□□ 0.12
SMARCD3-202ENST00000356800 TPTEP56180 551 aa15.77■□□□□ 0.12
SMARCD3-202ENST00000356800 MRPL49Q13405 166 aaKnown RBP15.77■□□□□ 0.12
SMARCD3-202ENST00000356800 DCTN2Q13561 401 aaKnown RBP15.77■□□□□ 0.12
SMARCD3-202ENST00000356800 SFXN4Q6P4A7 337 aa15.77■□□□□ 0.12
SMARCD3-202ENST00000356800 STAC2Q6ZMT1 411 aa15.77■□□□□ 0.12
SMARCD3-202ENST00000356800 BHLHA15Q7RTS1 189 aaPredicted RBP15.77■□□□□ 0.12
SMARCD3-202ENST00000356800 RELL2Q8NC24 303 aaPredicted RBP15.77■□□□□ 0.12
SMARCD3-202ENST00000356800 OR51E1Q8TCB6 317 aa15.77■□□□□ 0.12
SMARCD3-202ENST00000356800 TSEN15Q8WW01 171 aaKnown RBP15.77■□□□□ 0.12
SMARCD3-202ENST00000356800 NANOS1Q8WY41 292 aaKnown RBP15.77■□□□□ 0.12
SMARCD3-202ENST00000356800 ACOT12Q8WYK0 555 aa15.77■□□□□ 0.12
SMARCD3-202ENST00000356800 WDFY2Q96P53 400 aa15.77■□□□□ 0.12
SMARCD3-202ENST00000356800 SOX7Q9BT81 388 aa15.77■□□□□ 0.12
SMARCD3-202ENST00000356800 SLITRK2Q9H156 845 aa15.77■□□□□ 0.12
SMARCD3-202ENST00000356800 PIGMQ9H3S5 423 aa15.77■□□□□ 0.12
SMARCD3-202ENST00000356800 PLGRKTQ9HBL7 147 aa15.77■□□□□ 0.12
SMARCD3-202ENST00000356800 TCF7L1Q9HCS4 588 aa15.77■□□□□ 0.12
SMARCD3-202ENST00000356800 NOTOA8MTQ0 251 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 TMEM127O75204 238 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 CD2P06729 351 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 HOXB1P14653 301 aaPredicted RBP15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 CASP6P55212 293 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 OR10A3P58181 314 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 UBE2NP61088 152 aaKnown RBP15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 SNAI3Q3KNW1 292 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 CCDC190Q86UF4 302 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 CCDC36Q8IYA8 594 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 RND1Q92730 232 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 BORCS5Q969J3 196 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 MS4A3Q96HJ5 214 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 PGAM5Q96HS1 289 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 ANKRD61A6NGH8 418 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 EEF1E1-BLOC1S5C9J1V9 151 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 EEF1E1O43324 174 aaKnown RBP15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 LMX1BO60663 402 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 IGLV3-1P01715 115 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 CCL2P13500 99 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 STOMP27105 288 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 DDI2Q5TDH0 399 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 TMEM211Q6ICI0 200 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 MRGPRGQ86SM5 289 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 MYPOPQ86VE0 399 aaPredicted RBP15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 POM121L2Q96KW2 1035 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 LYZL4Q96KX0 146 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 JKAMPQ9P055 326 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 CMAHPQ9Y471 501 aa15.76■□□□□ 0.11
SMARCD3-202ENST00000356800 ATXN7O15265 892 aaPredicted RBP15.75■□□□□ 0.11
SMARCD3-202ENST00000356800 RGS5O15539 181 aa15.75■□□□□ 0.11
SMARCD3-202ENST00000356800 EPXP11678 715 aa15.75■□□□□ 0.11
SMARCD3-202ENST00000356800 ZNF14P17017 642 aaPredicted RBP15.75■□□□□ 0.11
SMARCD3-202ENST00000356800 FSTP19883 344 aa15.75■□□□□ 0.11
SMARCD3-202ENST00000356800 CCL1P22362 96 aa15.75■□□□□ 0.11
SMARCD3-202ENST00000356800 ZNF45Q02386 682 aa15.75■□□□□ 0.11
SMARCD3-202ENST00000356800 PLP2Q04941 152 aa15.75■□□□□ 0.11
SMARCD3-202ENST00000356800 ASPHD2Q6ICH7 369 aa15.75■□□□□ 0.11
SMARCD3-202ENST00000356800 MZT2AQ6P582 158 aa15.75■□□□□ 0.11
SMARCD3-202ENST00000356800 LRRTM1Q86UE6 522 aa15.75■□□□□ 0.11
SMARCD3-202ENST00000356800 C17orf78Q8N4C9 275 aa15.75■□□□□ 0.11
SMARCD3-202ENST00000356800 GPR84Q9NQS5 396 aa15.75■□□□□ 0.11
SMARCD3-202ENST00000356800 A0A0U1RQV5 110 aa15.74■□□□□ 0.11
SMARCD3-202ENST00000356800 C5orf49A4QMS7 147 aa15.74■□□□□ 0.11
SMARCD3-202ENST00000356800 TBX1O43435 398 aa15.74■□□□□ 0.11
SMARCD3-202ENST00000356800 LCATP04180 440 aa15.74■□□□□ 0.11
SMARCD3-202ENST00000356800 SERPINA5P05154 406 aa15.74■□□□□ 0.11
SMARCD3-202ENST00000356800 CELA3BP08861 270 aa15.74■□□□□ 0.11
SMARCD3-202ENST00000356800 PSMB1P20618 241 aaKnown RBP15.74■□□□□ 0.11
SMARCD3-202ENST00000356800 TNFSF8P32971 234 aa15.74■□□□□ 0.11
SMARCD3-202ENST00000356800 THBS2P35442 1172 aa15.74■□□□□ 0.11
SMARCD3-202ENST00000356800 PSMD7P51665 324 aa15.74■□□□□ 0.11
SMARCD3-202ENST00000356800 IDNKQ5T6J7 187 aa15.74■□□□□ 0.11
SMARCD3-202ENST00000356800 LAX1Q8IWV1 398 aa15.74■□□□□ 0.11
SMARCD3-202ENST00000356800 PAQR4Q8N4S7 273 aaPredicted RBP15.74■□□□□ 0.11
SMARCD3-202ENST00000356800 OR13C3Q8NGS6 347 aa15.74■□□□□ 0.11
SMARCD3-202ENST00000356800 CEP19Q96LK0 163 aa15.74■□□□□ 0.11
SMARCD3-202ENST00000356800 GFI1Q99684 422 aa15.74■□□□□ 0.11
SMARCD3-202ENST00000356800 C1QTNF5Q9BXJ0 243 aa15.74■□□□□ 0.11
SMARCD3-202ENST00000356800 PALMDQ9NP74 551 aa15.74■□□□□ 0.11
SMARCD3-202ENST00000356800 ABCB9Q9NP78 766 aa15.74■□□□□ 0.11
SMARCD3-202ENST00000356800 FOXJ3Q9UPW0 622 aa15.74■□□□□ 0.11
SMARCD3-202ENST00000356800 AK6Q9Y3D8 172 aaKnown RBP15.74■□□□□ 0.11
SMARCD3-202ENST00000356800 TRAV8-7A0A075B6U6 113 aa15.73■□□□□ 0.11
SMARCD3-202ENST00000356800 OR5H1A6NKK0 313 aa15.73■□□□□ 0.11
SMARCD3-202ENST00000356800 CCL21O00585 134 aa15.73■□□□□ 0.11
SMARCD3-202ENST00000356800 SYT7O43581 403 aa15.73■□□□□ 0.11
SMARCD3-202ENST00000356800 AGFG2O95081 481 aa15.73■□□□□ 0.11
SMARCD3-202ENST00000356800 PPP3R1P63098 170 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms