RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ABI3BPQ7Z7G0 1075 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 ZNF511Q8NB15 262 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 OR10P1Q8NGE3 313 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 EGLN2Q96KS0 407 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 TINAGL1Q9GZM7 467 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-202ENST00000356435 WDR61Q9GZS3 305 aaKnown RBP5.02□□□□□ -1.61
PTPRD-202ENST00000356435 OR51I2Q9H344 312 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 OR5V1Q9UGF6 321 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 KRBOX1C9JBD0 128 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 AREGP15514 252 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 COX5AP20674 150 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 IFITM2Q01629 132 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 ACKR1Q16570 336 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 SFT2D1Q8WV19 159 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 LRFN3Q9BTN0 628 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 ACOXLQ9NUZ1 547 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 WNT16Q9UBV4 365 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 FLVCR1Q9Y5Y0 555 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 V9GYS6 101 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 ZNF716A6NP11 495 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 HPP00738 406 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 ORM1P02763 201 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 APEX1P27695 318 aaKnown RBP5.02□□□□□ -1.61
PTPRD-202ENST00000356435 CD82P27701 267 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 POLR2IP36954 125 aaKnown RBP5.02□□□□□ -1.61
PTPRD-202ENST00000356435 TAGLN2P37802 199 aaKnown RBP5.02□□□□□ -1.61
PTPRD-202ENST00000356435 MDH2P40926 338 aaKnown RBP5.02□□□□□ -1.61
PTPRD-202ENST00000356435 GPM6AP51674 278 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 PRRX1P54821 245 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 IFITM3Q01628 133 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 CTU2Q2VPK5 515 aaKnown RBP5.02□□□□□ -1.61
PTPRD-202ENST00000356435 PLAC9Q5JTB6 97 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 DRAM2Q6UX65 266 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 SLC38A6Q8IZM9 456 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 BATF2Q8N1L9 274 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 C3orf30Q96M34 536 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 ADAT1Q9BUB4 502 aaKnown RBP5.02□□□□□ -1.61
PTPRD-202ENST00000356435 RBFOX1Q9NWB1 397 aaKnown RBP5.02□□□□□ -1.61
PTPRD-202ENST00000356435 CLCF1Q9UBD9 225 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 DDX60LQ5H9U9 1706 aaKnown RBP5.02□□□□□ -1.61
PTPRD-202ENST00000356435 TRGV5A0A0B4J1U4 118 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 F2RL2O00254 374 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 RBP4P02753 201 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 SLC25A6P12236 298 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 RAB7AP51149 207 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 OPCMLQ14982 345 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 TRIP6Q15654 476 aaKnown RBP5.02□□□□□ -1.61
PTPRD-202ENST00000356435 OR2B11Q5JQS5 317 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 OR10K2Q6IF99 312 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 OR10K1Q8NGX5 313 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 GALMQ96C23 342 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 TMEM56Q96MV1 263 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 DDOQ99489 341 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 RYDENQ9NUL5 291 aaKnown RBP5.02□□□□□ -1.61
PTPRD-202ENST00000356435 P4HTMQ9NXG6 502 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 TRDV1A0A1B0GX56 115 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 MS4A18H0YCH9 400 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 WDR1O75083 606 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 RPL7P18124 248 aaKnown RBP5.02□□□□□ -1.61
PTPRD-202ENST00000356435 MS4A18Q3C1V0 323 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 STUMQ69YW2 141 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 JMJD6Q6NYC1 403 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-202ENST00000356435 DNAJC5GQ8N7S2 189 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 SLC24A4Q8NFF2 622 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 OR5H6Q8NGV6 325 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 BANF2Q9H503 90 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 ADAM10O14672 748 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 SPRY3O43610 288 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 FGF17O60258 216 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 KLK8O60259 260 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 H2AFB1P0C5Y9 115 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 EPHA2P29317 976 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 FCER1GP30273 86 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 ACVR1Q04771 509 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 DOC2BQ14184 412 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 AGBL4Q5VU57 503 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 ZNF425Q6IV72 752 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 ZNF705AQ6ZN79 300 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-202ENST00000356435 AMIGO3Q86WK7 504 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 VRK3Q8IV63 474 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 SLC16A11Q8NCK7 471 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 NPEPL1Q8NDH3 523 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 GABARAPL3Q9BY60 117 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 TAF9BQ9HBM6 251 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 POMT2Q9UKY4 750 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 HDGFL3Q9Y3E1 203 aa5.02□□□□□ -1.61
PTPRD-202ENST00000356435 CROCCQ5TZA2 2017 aa5.01□□□□□ -1.61
PTPRD-202ENST00000356435 UPK1AO00322 258 aa5.01□□□□□ -1.61
PTPRD-202ENST00000356435 UCNP55089 124 aa5.01□□□□□ -1.61
PTPRD-202ENST00000356435 PFN3P60673 137 aa5.01□□□□□ -1.61
PTPRD-202ENST00000356435 IL11RAQ14626 422 aa5.01□□□□□ -1.61
PTPRD-202ENST00000356435 AVPI1Q5T686 147 aa5.01□□□□□ -1.61
PTPRD-202ENST00000356435 TMEM108Q6UXF1 575 aa5.01□□□□□ -1.61
PTPRD-202ENST00000356435 TMEM182Q6ZP80 229 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-202ENST00000356435 SIAH3Q8IW03 269 aa5.01□□□□□ -1.61
PTPRD-202ENST00000356435 CADM4Q8NFZ8 388 aa5.01□□□□□ -1.61
PTPRD-202ENST00000356435 OR5M9Q8NGP3 310 aa5.01□□□□□ -1.61
PTPRD-202ENST00000356435 GPBAR1Q8TDU6 330 aa5.01□□□□□ -1.61
PTPRD-202ENST00000356435 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-202ENST00000356435 PBOV1Q9GZY1 135 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms