RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 EMC6Q9BV81 110 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 CLCF1Q9UBD9 225 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 MYH11P35749 1972 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 RGPD5Q99666 1765 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 FITM1A5D6W6 292 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 RNASEK-C17orf49H0YIS7 233 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 ZGLP1P0C6A0 271 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 KCNAB1Q14722 419 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 RNPS1Q15287 305 aaKnown RBP5.86□□□□□ -1.47
UPF2-201ENST00000356352 DLEU7Q6UYE1 221 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 PP6455Q8WZ26 134 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 ARSGQ96EG1 525 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 ZIC5Q96T25 663 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 CHST6Q9GZX3 395 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 KAT6AQ92794 2004 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 DHHO43323 396 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 CXCL13O43927 109 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 ORM1P02763 201 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 TFAP2AP05549 437 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 FCER1GP30273 86 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 HAAOP46952 286 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 AMTP48728 403 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 CCSMST1Q4G0I0 132 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 TMEM211Q6ICI0 200 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 ANKRD16Q6P6B7 361 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 GFRALQ6UXV0 394 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 SLC36A1Q7Z2H8 476 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 BCDIN3DQ7Z5W3 292 aaKnown RBP5.86□□□□□ -1.47
UPF2-201ENST00000356352 OR2M7Q8NG81 312 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 MOB3AQ96BX8 217 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 C20orf27Q9GZN8 174 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 CTDSP1Q9GZU7 261 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 SLC2A8Q9NY64 477 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 ZNF835Q9Y2P0 537 aa5.86□□□□□ -1.47
UPF2-201ENST00000356352 CCSO14618 274 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 HRO43593 1189 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 LRP3O75074 770 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 CPN1P15169 458 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 HMGA1P17096 107 aaKnown RBP5.85□□□□□ -1.47
UPF2-201ENST00000356352 FGF7P21781 194 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 P2RX3P56373 397 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 PDZK1IP1Q13113 114 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 NCR3LG1Q68D85 454 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 TIPARPQ7Z3E1 657 aaKnown RBP5.85□□□□□ -1.47
UPF2-201ENST00000356352 ETFBKMTQ8IXQ9 262 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 COMMD1Q8N668 190 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 KIAA1958Q8N8K9 716 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 TMEM229BQ8NBD8 167 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 RDH5Q92781 318 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 TMEM18Q96B42 140 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 DUS3LQ96G46 650 aaKnown RBP5.85□□□□□ -1.47
UPF2-201ENST00000356352 FYTTD1Q96QD9 318 aaKnown RBP5.85□□□□□ -1.47
UPF2-201ENST00000356352 FKBP11Q9NYL4 201 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 ARL2-SNX15V9GYD0 113 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 TRAV1-2A0A0B4J238 106 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 TMEM235A6NFC5 223 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 KLK8O60259 260 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 GOSR1O95249 250 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 SIX6O95475 246 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 OR5H8P0DN80 308 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 RAB7AP51149 207 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 PTTG1IPP53801 180 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 CDK5R1Q15078 307 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 Q1RN00 199 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 PRSS45Q7RTY3 260 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 OR2W3Q7Z3T1 314 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 MAVSQ7Z434 540 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 ZFP62Q8NB50 900 aaPredicted RBP5.85□□□□□ -1.47
UPF2-201ENST00000356352 ERGIC1Q969X5 290 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 SPSB1Q96BD6 273 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 TVP23CQ96ET8 276 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 GSX2Q9BZM3 304 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 GDF2Q9UK05 429 aaPredicted RBP5.85□□□□□ -1.47
UPF2-201ENST00000356352 MYH8P13535 1937 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 TRAV17A0A0B4J275 112 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 TMEM202A6NGA9 273 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 IFITM5A6NNB3 132 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 ZNF785A8K8V0 405 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 GPR31O00270 319 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 TSPAN12O95859 305 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 CALCRP30988 508 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 POLR2IP36954 125 aaKnown RBP5.85□□□□□ -1.47
UPF2-201ENST00000356352 BAMBIQ13145 260 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 BTLAQ7Z6A9 289 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 RBM45Q8IUH3 476 aaKnown RBP5.85□□□□□ -1.47
UPF2-201ENST00000356352 C16orf52Q8NHV5 167 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 SMIM7Q9BQ49 75 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 HINT3Q9NQE9 182 aaKnown RBP5.85□□□□□ -1.47
UPF2-201ENST00000356352 SLC17A5Q9NRA2 495 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 POMT2Q9UKY4 750 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 TMEM265A0A087WTH1 108 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 A0A1W2PNR3 127 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 OR2J2O76002 312 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 OR4E1P0C645 316 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 FAM157BP0CG42 384 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 SULT1A3P0DMM9 295 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 SULT1A4P0DMN0 295 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 MGMTP16455 207 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 KCNJ3P48549 501 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 TPPP2P59282 170 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 1604.8 ms