RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 LSRQ86X29 649 aaPredicted RBP15.72■□□□□ 0.11
COL27A1-201ENST00000356083 RNF113BQ8IZP6 322 aaKnown RBP15.72■□□□□ 0.11
COL27A1-201ENST00000356083 OR1J1Q8NGS3 322 aa15.72■□□□□ 0.11
COL27A1-201ENST00000356083 MED17Q9NVC6 651 aa15.72■□□□□ 0.11
COL27A1-201ENST00000356083 DOCK5Q9H7D0 1870 aa15.72■□□□□ 0.11
COL27A1-201ENST00000356083 CTDSP2O14595 271 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 DPY19L2P2Q6ZN68 376 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 SLC39A11Q8N1S5 342 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 GLIPR2Q9H4G4 154 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 PRSS16Q9NQE7 514 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 CLEC18AA5D8T8 446 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 HOXD9P28356 352 aaPredicted RBP15.71■□□□□ 0.11
COL27A1-201ENST00000356083 SIAH3Q8IW03 269 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 ZDHHC23Q8IYP9 409 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 CLEC18CQ8NCF0 446 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 CHST8Q9H2A9 424 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 SLAMF8Q9P0V8 285 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 ADRA2CP18825 462 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 TSPAN31Q12999 210 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 ENDOGQ14249 297 aaKnown RBP15.71■□□□□ 0.11
COL27A1-201ENST00000356083 OR11G2Q8NGC1 345 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 RFPL4AA6NLU0 287 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 RFPL4AL1F8VTS6 287 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 M0R082 166 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 PPP6CO00743 305 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 KIAA1024LP59773 190 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 EMX1Q04741 257 aaPredicted RBP15.71■□□□□ 0.11
COL27A1-201ENST00000356083 VEZF1Q14119 521 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 RPUSD3Q6P087 351 aaKnown RBP15.71■□□□□ 0.11
COL27A1-201ENST00000356083 LHFPL2Q6ZUX7 228 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 UBE3DQ7Z6J8 389 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 PTRH1Q86Y79 214 aaKnown RBP15.71■□□□□ 0.11
COL27A1-201ENST00000356083 DYSFO75923 2080 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 UMAD1C9J7I0 102 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 DUS4LO95620 317 aaKnown RBP15.71■□□□□ 0.11
COL27A1-201ENST00000356083 GCGP01275 180 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 GABRB3P28472 473 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 TRIM23P36406 574 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 OR13D1Q8NGV5 346 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 OR2T11Q8NH01 316 aa15.71■□□□□ 0.11
COL27A1-201ENST00000356083 PHOX2AO14813 284 aa15.71■□□□□ 0.1
COL27A1-201ENST00000356083 SNRPGP62308 76 aaKnown RBP15.71■□□□□ 0.1
COL27A1-201ENST00000356083 WSB2Q9NYS7 404 aaPredicted RBP15.71■□□□□ 0.1
COL27A1-201ENST00000356083 ANKRD36CQ5JPF3 1778 aa15.71■□□□□ 0.1
COL27A1-201ENST00000356083 ZNF740Q8NDX6 193 aa15.71■□□□□ 0.1
COL27A1-201ENST00000356083 ZNF384Q8TF68 577 aa15.71■□□□□ 0.1
COL27A1-201ENST00000356083 ZNF416Q9BWM5 594 aa15.71■□□□□ 0.1
COL27A1-201ENST00000356083 IL17CQ9P0M4 197 aa15.71■□□□□ 0.1
COL27A1-201ENST00000356083 NDRG4Q9ULP0 352 aaKnown RBP15.71■□□□□ 0.1
COL27A1-201ENST00000356083 KCNE4Q8WWG9 221 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 LOXL2Q9Y4K0 774 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 M0R135 149 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 G6PCP35575 357 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 CSNK1G2P78368 415 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 ZNF799Q96GE5 643 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 IGHV3OR16-12A0A075B7B8 117 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 UNCXA6NJT0 531 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 MGPP08493 103 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 PLA2G3Q9NZ20 509 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 IGKV3D-15A0A087WSY6 115 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 IGKV3-15P01624 115 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 OR4D10Q8NGI6 311 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 OR5D13Q8NGL4 314 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 CSF3RQ99062 836 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 PTDSS2Q9BVG9 487 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 GPR84Q9NQS5 396 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 C3orf80F5H4A9 247 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 SLC25A5P05141 298 aaKnown RBP15.7■□□□□ 0.1
COL27A1-201ENST00000356083 CD14P08571 375 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 PHRF1Q9P1Y6 1649 aaKnown RBP15.7■□□□□ 0.1
COL27A1-201ENST00000356083 A0A1W2PNV4 684 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 LRRC26Q2I0M4 334 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 ZNF528Q3MIS6 628 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 ZNF534Q76KX8 674 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 SPRED1Q7Z699 444 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 ZNF683Q8IZ20 524 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 PLCE1Q9P212 2302 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 KLK4Q9Y5K2 254 aa15.7■□□□□ 0.1
COL27A1-201ENST00000356083 AKR1C3P42330 323 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 ZNF620Q6ZNG0 422 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 GDPGP1Q6ZNW5 385 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 TCFL5Q9UL49 500 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 LAMA4Q16363 1823 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 CHRM2P08172 466 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 SPEM2Q0P670 501 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 LHX4Q969G2 390 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 KIR2DS1A0A191URI9 304 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 K7ESM1 405 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 KIR2DS4P43632 304 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 KIR2DS1Q14954 304 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 NKAIN3Q8N8D7 197 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 FBXO27Q8NI29 283 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 TSLPQ969D9 159 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 KRASP01116 189 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 FOXK2Q01167 660 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 KMT5CQ86Y97 462 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 C3orf30Q96M34 536 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 CHRDL1Q9BU40 450 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 MKRN2Q9H000 416 aaKnown RBP15.69■□□□□ 0.1
COL27A1-201ENST00000356083 COA4Q9NYJ1 87 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms