RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 ZNF708P17019 499 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 ZNF182P17025 639 aaPredicted RBP6.07□□□□□ -1.44
VPS13A-201ENST00000355766 IL11P20809 199 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 ENPP1P22413 925 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 GDF1P27539 372 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 TIMP3P35625 211 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 DNASE1L1P49184 302 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 PTH2RP49190 550 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 ENTPD1P49961 510 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 OR2B6P58173 313 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 RPS3AP61247 264 aaKnown RBP6.07□□□□□ -1.44
VPS13A-201ENST00000355766 SIRPAP78324 504 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 RASGEF1BQ0VAM2 473 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 SLC17A1Q14916 467 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 SLC10A1Q14973 349 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 SPCS2Q15005 226 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 CDK5R1Q15078 307 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 MOGQ16653 247 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 ZNF404Q494X3 552 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 YIF1BQ5BJH7 314 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 OR2G6Q5TZ20 316 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 LIPKQ5VXJ0 399 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 TMEM225Q6GV28 225 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 LHFPL3Q86UP9 236 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 TPRA1Q86W33 373 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 GLB1L2Q8IW92 636 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 PM20D2Q8IYS1 436 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 TMEM99Q8N816 258 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 SLC26A10Q8NG04 563 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 ZPLD1Q8TCW7 415 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 SPRYD4Q8WW59 207 aaPredicted RBP6.07□□□□□ -1.44
VPS13A-201ENST00000355766 ITFG2Q969R8 447 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 SLC25A46Q96AG3 418 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 ZMYND19Q96E35 227 aaPredicted RBP6.07□□□□□ -1.44
VPS13A-201ENST00000355766 C4orf36Q96KX1 117 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 WDR12Q9GZL7 423 aaKnown RBP6.07□□□□□ -1.44
VPS13A-201ENST00000355766 SLIRPQ9GZT3 109 aaKnown RBP6.07□□□□□ -1.44
VPS13A-201ENST00000355766 NUAK2Q9H093 628 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 MOB1AQ9H8S9 216 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 MED20Q9H944 212 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 UBTD1Q9HAC8 227 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 HMG20AQ9NP66 347 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 AURKAIP1Q9NWT8 199 aaPredicted RBP6.07□□□□□ -1.44
VPS13A-201ENST00000355766 JKAMPQ9P055 326 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 EMC3Q9P0I2 261 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 CRNNQ9UBG3 495 aaPredicted RBP6.07□□□□□ -1.44
VPS13A-201ENST00000355766 LAMP5Q9UJQ1 280 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 PEX16Q9Y5Y5 336 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 CHD3Q12873 2000 aaKnown RBP6.07□□□□□ -1.44
VPS13A-201ENST00000355766 PCNX3Q9H6A9 2034 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 EML6Q6ZMW3 1958 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 SONP18583 2426 aaKnown RBP6.07□□□□□ -1.44
VPS13A-201ENST00000355766 TRAV1-2A0A0B4J238 106 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 PNMA8CA0A1B0GUJ8 204 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 KRTAP23-1A1A580 65 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 ZNF726A6NNF4 738 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 ZNF724A8MTY0 619 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 C11orf98E9PRG8 122 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 SLC16A7O60669 478 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 CYTIPO60759 359 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 GPX5O75715 221 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 SERPINI2O75830 405 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 AKR7A3O95154 331 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 ABHD16AO95870 558 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 GYPBP06028 91 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 CLUP10909 449 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 CPN1P15169 458 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 CTLA4P16410 223 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 CELP19835 753 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 NPR2P20594 1047 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 APEX1P27695 318 aaKnown RBP6.06□□□□□ -1.44
VPS13A-201ENST00000355766 PYCR1P32322 319 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 SFTPDP35247 375 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 ETV6P41212 452 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 RANBP1P43487 201 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 MTNR1BP49286 362 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 RORCP51449 518 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 BIDP55957 195 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 CARD18P57730 90 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 CLRN1P58418 232 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 VBP1P61758 197 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 NCS1P62166 190 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 LSM6P62312 80 aaKnown RBP6.06□□□□□ -1.44
VPS13A-201ENST00000355766 RUNX1T1Q06455 604 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 DCTN2Q13561 401 aaKnown RBP6.06□□□□□ -1.44
VPS13A-201ENST00000355766 RIN1Q13671 783 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 RNPS1Q15287 305 aaKnown RBP6.06□□□□□ -1.44
VPS13A-201ENST00000355766 ZNF829Q3KNS6 432 aaPredicted RBP6.06□□□□□ -1.44
VPS13A-201ENST00000355766 HBMQ6B0K9 141 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 CREB3L2Q70SY1 520 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 ZNF679Q8IYX0 411 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 TMEM123Q8N131 208 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 OR9K2Q8NGE7 335 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 OR52N5Q8NH56 324 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 NEIL3Q8TAT5 605 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 NDNFQ8TB73 568 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 TBC1D15Q8TC07 691 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 RNF128Q8TEB7 428 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 TMEM54Q969K7 222 aa6.06□□□□□ -1.44
VPS13A-201ENST00000355766 PELI1Q96FA3 418 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms