RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 FAM220AQ7Z4H9 259 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 TDHQ8IZJ6 230 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 SYS1Q8N2H4 156 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 C19orf47Q8N9M1 422 aaKnown RBP8.41□□□□□ -1.06
SMG6-202ENST00000354901 OR51A4Q8NGJ6 313 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 OR8U1Q8NH10 309 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 ZNF524Q96C55 264 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 ADOQ96SZ5 270 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 MRPL37Q9BZE1 423 aaKnown RBP8.41□□□□□ -1.06
SMG6-202ENST00000354901 KCNIP3Q9Y2W7 256 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 ZNF281Q9Y2X9 895 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 PCDH15Q96QU1 1955 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 PCNX3Q9H6A9 2034 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 TNFRSF10CO14798 259 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 SNAPC5O75971 98 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 OR2C1O95371 312 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 MMP7P09237 267 aaPredicted RBP8.41□□□□□ -1.06
SMG6-202ENST00000354901 GIMD1P0DJR0 217 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 MAPK3P27361 379 aaPredicted RBP8.41□□□□□ -1.06
SMG6-202ENST00000354901 S100A7P31151 101 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 SULT1A1P50225 295 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 EFNB2P52799 333 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 STARD6P59095 220 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 PKIAP61925 76 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 PPA1Q15181 289 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 RNF151Q2KHN1 245 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 ALG10Q5BKT4 473 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 PWWP2BQ6NUJ5 590 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 DPY19L2P2Q6ZN68 376 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 Q6ZRG5 221 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 SLC35D2Q76EJ3 337 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 JAGN1Q8N5M9 183 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 NEU1Q99519 415 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 WDR76Q9H967 626 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 ANKRD10Q9NXR5 420 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 FREM3P0C091 2139 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 A0A087WZY1 265 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 RRP8O43159 456 aaKnown RBP8.4□□□□□ -1.06
SMG6-202ENST00000354901 ALOX12BO75342 701 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 HEXAP06865 529 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 HIST1H1BP16401 226 aaKnown RBP8.4□□□□□ -1.06
SMG6-202ENST00000354901 OR1D4P47884 311 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 IL10RAQ13651 578 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 GAS6Q14393 721 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 MPPED2Q15777 294 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 C1QL3Q5VWW1 255 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 GALNT16Q8N428 558 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 ZNF676Q8N7Q3 588 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 OR4S1Q8NGB4 309 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 SLC25A43Q8WUT9 341 aaPredicted RBP8.4□□□□□ -1.06
SMG6-202ENST00000354901 KTI12Q96EK9 354 aaPredicted RBP8.4□□□□□ -1.06
SMG6-202ENST00000354901 LMF2Q9BU23 707 aaKnown RBP8.4□□□□□ -1.06
SMG6-202ENST00000354901 G6PC3Q9BUM1 346 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 TPSD1Q9BZJ3 242 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 KIF26BQ2KJY2 2108 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 IGKV1D-42A0A075B6H8 117 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 C17orf105B2RV13 164 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 NPIPB9F8W1W9 429 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 PAX6P26367 422 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 GFERP55789 205 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 RAB4BP61018 213 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 ADAM8P78325 824 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 KHDC3LQ587J8 217 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 TEX30Q5JUR7 227 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 Q6ZS52 159 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 BHLHE23Q8NDY6 225 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 OR13C9Q8NGT0 318 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 OR5AK2Q8NH90 309 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 GPBAR1Q8TDU6 330 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 NUDCD2Q8WVJ2 157 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 PIK3IP1Q96FE7 263 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 BCO1Q9HAY6 547 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 STEAP1Q9UHE8 339 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 ICAM5Q9UMF0 924 aa8.4□□□□□ -1.06
SMG6-202ENST00000354901 COL4A2P08572 1712 aa8.4□□□□□ -1.07
SMG6-202ENST00000354901 MSGN1A6NI15 193 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 UMAD1C9J7I0 102 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 CTNSO60931 367 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 GLCEO94923 617 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 SCAF4O95104 1147 aaKnown RBP8.39□□□□□ -1.07
SMG6-202ENST00000354901 IFNA10P01566 189 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 APLNRP35414 380 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 CARD18P57730 90 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 FOXL2P58012 376 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 IL13RA1P78552 427 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 MRPS21P82921 87 aaKnown RBP8.39□□□□□ -1.07
SMG6-202ENST00000354901 RASGEF1BQ0VAM2 473 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 SQSTM1Q13501 440 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 LINC01590Q5TEZ4 76 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 LINC00114Q6XXX2 140 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 STAC2Q6ZMT1 411 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 DBX2Q6ZNG2 339 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 OVCH1Q7RTY7 1134 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 OR56B1Q8NGI3 324 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 OR5M8Q8NGP6 311 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 FAM174AQ8TBP5 190 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 MITD1Q8WV92 249 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.39□□□□□ -1.07
SMG6-202ENST00000354901 PPP1R14AQ96A00 147 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 CHST5Q9GZS9 411 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms