RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 GMPPAQ96IJ6 420 aaPredicted RBP8.69□□□□□ -1.02
GABPA-201ENST00000354828 CCDC32Q9BV29 185 aa8.69□□□□□ -1.02
GABPA-201ENST00000354828 CACNG2Q9Y698 323 aa8.69□□□□□ -1.02
GABPA-201ENST00000354828 A0A1B0GV50 99 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 IFNA1P01562 189 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 RNLSQ5VYX0 342 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 FAM26EQ8N5C1 309 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 OR2M3Q8NG83 312 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 JAM3Q9BX67 310 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 A0A1B0GUH1 482 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 E9PI62 339 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 SCG5P05408 212 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 CHRM2P08172 466 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 HNF1AP20823 631 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 ARL3P36405 182 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 TAF9Q16594 264 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 AKR1C8PQ5T2L2 129 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 OR52W1Q6IF63 320 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 CMBLQ96DG6 245 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 SF3B5Q9BWJ5 86 aaKnown RBP8.68□□□□□ -1.02
GABPA-201ENST00000354828 TRAPPC4Q9Y296 219 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 SULT1C4O75897 302 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 DNASE1P24855 282 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 HOXA6P31267 233 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 RPS16P62249 146 aaKnown RBP8.68□□□□□ -1.02
GABPA-201ENST00000354828 GNG3P63215 75 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 C6orf183Q5T699 404 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 DRAM2Q6UX65 266 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 OR2AK2Q8NG84 335 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 HSPB11Q9Y547 144 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 MYOFQ9NZM1 2061 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 AGTR1P30556 359 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 MTNR1BP49286 362 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 ZNF616Q08AN1 781 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 NUFIP2Q7Z417 695 aaKnown RBP8.68□□□□□ -1.02
GABPA-201ENST00000354828 KLHDC8BQ8IXV7 354 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 FDCSPQ8NFU4 85 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 RANBP3Q9H6Z4 567 aaPredicted RBP8.68□□□□□ -1.02
GABPA-201ENST00000354828 SIRT3Q9NTG7 399 aaPredicted RBP8.68□□□□□ -1.02
GABPA-201ENST00000354828 NECAP2Q9NVZ3 263 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 CACNA1HO95180 2353 aa8.68□□□□□ -1.02
GABPA-201ENST00000354828 M0R036 132 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 TERTO14746 1132 aaKnown RBP8.67□□□□□ -1.02
GABPA-201ENST00000354828 IGLV3-19P01714 112 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 MT-ND4P03905 459 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 RPS2P15880 293 aaKnown RBP8.67□□□□□ -1.02
GABPA-201ENST00000354828 FUT6P51993 359 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 NKX6-1P78426 367 aaPredicted RBP8.67□□□□□ -1.02
GABPA-201ENST00000354828 PDLIM3Q53GG5 364 aaPredicted RBP8.67□□□□□ -1.02
GABPA-201ENST00000354828 SLC35G3Q8N808 338 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 HEYLQ9NQ87 328 aaPredicted RBP8.67□□□□□ -1.02
GABPA-201ENST00000354828 SLC23A1Q9UHI7 598 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 RCE1Q9Y256 329 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 SSUH2Q9Y2M2 353 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 RP1P56715 2156 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 FAM221AA4D161 298 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 C3orf80F5H4A9 247 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 PLPP3O14495 311 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 RP2O75695 350 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 SC5DO75845 299 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 CSF3P09919 207 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 MPGP29372 298 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 AKR1C1Q04828 323 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 CDCP2Q5VXM1 449 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 MOB3BQ86TA1 216 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 RBMXL3Q8N7X1 1067 aaKnown RBP8.67□□□□□ -1.02
GABPA-201ENST00000354828 CD300LFQ8TDQ1 290 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 KCTD12Q96CX2 325 aaKnown RBP8.67□□□□□ -1.02
GABPA-201ENST00000354828 ABHD17AQ96GS6 310 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 UCN2Q96RP3 112 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 ARL6Q9H0F7 186 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 PLAC1Q9HBJ0 212 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 C20orf141Q9NUB4 165 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 TXNL4BQ9NX01 149 aaKnown RBP8.67□□□□□ -1.02
GABPA-201ENST00000354828 LRRC37A2A6NM11 1700 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 AHRRA9YTQ3 701 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 OR51H1Q8NH63 302 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 SLC25A19Q9HC21 320 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 C1orf123Q9NWV4 160 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 ARID2Q68CP9 1835 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 NCBP2LA6PVI3 153 aaKnown RBP8.67□□□□□ -1.02
GABPA-201ENST00000354828 GABARAPH6UMI1 98 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 ADAM20O43506 726 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 GABARAPO95166 117 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 SCGB2A2Q13296 93 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 RTL8BQ17RB0 113 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 DCUN1D4Q92564 292 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 SLAMF9Q96A28 289 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 MS4A5Q9H3V2 200 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 PLEKHF2Q9H8W4 249 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 C12orf10Q9HB07 376 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 ZAR1LA6NP61 321 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 FXYD1O00168 92 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 PMP2P02689 132 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 CT45A8P0DMV1 189 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 CT45A9P0DMV2 189 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 PTPN6P29350 595 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 TIAL1Q01085 375 aaKnown RBP eCLIP8.67□□□□□ -1.02
GABPA-201ENST00000354828 TBRG1Q3YBR2 411 aa8.67□□□□□ -1.02
GABPA-201ENST00000354828 CT45A2Q5DJT8 189 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms