RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 GTPBP8Q8N3Z3 284 aaPredicted RBP19.57■□□□□ 0.72
UPF3A-201ENST00000351487 CHST4Q8NCG5 386 aa19.57■□□□□ 0.72
UPF3A-201ENST00000351487 OR10R2Q8NGX6 335 aa19.57■□□□□ 0.72
UPF3A-201ENST00000351487 TMA7Q9Y2S6 64 aaKnown RBP19.57■□□□□ 0.72
UPF3A-201ENST00000351487 TRAV14DV4A0A0A6YYC5 116 aa19.57■□□□□ 0.72
UPF3A-201ENST00000351487 ZNF726A6NNF4 738 aa19.57■□□□□ 0.72
UPF3A-201ENST00000351487 SULT2B1O00204 365 aa19.57■□□□□ 0.72
UPF3A-201ENST00000351487 KLK2P20151 261 aa19.57■□□□□ 0.72
UPF3A-201ENST00000351487 TBPP20226 339 aa19.57■□□□□ 0.72
UPF3A-201ENST00000351487 M6PRP20645 277 aa19.57■□□□□ 0.72
UPF3A-201ENST00000351487 CXADRP78310 365 aa19.57■□□□□ 0.72
UPF3A-201ENST00000351487 TMPPEQ6ZT21 453 aa19.57■□□□□ 0.72
UPF3A-201ENST00000351487 SLC25A42Q86VD7 318 aa19.57■□□□□ 0.72
UPF3A-201ENST00000351487 SUN5Q8TC36 379 aa19.57■□□□□ 0.72
UPF3A-201ENST00000351487 LRRC20Q8TCA0 184 aa19.57■□□□□ 0.72
UPF3A-201ENST00000351487 NUDCD2Q8WVJ2 157 aa19.57■□□□□ 0.72
UPF3A-201ENST00000351487 MRGPRFQ96AM1 343 aa19.57■□□□□ 0.72
UPF3A-201ENST00000351487 GPR84Q9NQS5 396 aa19.57■□□□□ 0.72
UPF3A-201ENST00000351487 NUP50Q9UKX7 468 aa19.57■□□□□ 0.72
UPF3A-201ENST00000351487 IGHV1-45A0A0A0MS14 117 aa19.56■□□□□ 0.72
UPF3A-201ENST00000351487 NMBP08949 121 aa19.56■□□□□ 0.72
UPF3A-201ENST00000351487 NR2C1P13056 603 aa19.56■□□□□ 0.72
UPF3A-201ENST00000351487 ZNF250P15622 560 aa19.56■□□□□ 0.72
UPF3A-201ENST00000351487 ABOP16442 354 aa19.56■□□□□ 0.72
UPF3A-201ENST00000351487 NKPD1Q17RQ9 610 aa19.56■□□□□ 0.72
UPF3A-201ENST00000351487 CD163Q86VB7 1156 aa19.56■□□□□ 0.72
UPF3A-201ENST00000351487 GVQW1Q8N7I0 195 aa19.56■□□□□ 0.72
UPF3A-201ENST00000351487 IFI44Q8TCB0 444 aa19.56■□□□□ 0.72
UPF3A-201ENST00000351487 C1orf147Q96MC9 270 aaPredicted RBP19.56■□□□□ 0.72
UPF3A-201ENST00000351487 ZNF319Q9P2F9 582 aa19.56■□□□□ 0.72
UPF3A-201ENST00000351487 FBXO4Q9UKT5 387 aa19.56■□□□□ 0.72
UPF3A-201ENST00000351487 PLEKHA6Q9Y2H5 1048 aa19.56■□□□□ 0.72
UPF3A-201ENST00000351487 hCG_1807616A0A1W2PRN6 198 aa19.56■□□□□ 0.72
UPF3A-201ENST00000351487 CCDC85CA6NKD9 419 aa19.56■□□□□ 0.72
UPF3A-201ENST00000351487 YKT6O15498 198 aa19.56■□□□□ 0.72
UPF3A-201ENST00000351487 TLX3O43711 291 aaPredicted RBP19.56■□□□□ 0.72
UPF3A-201ENST00000351487 HLA-AP01891 365 aaKnown RBP19.56■□□□□ 0.72
UPF3A-201ENST00000351487 CHRM2P08172 466 aa19.56■□□□□ 0.72
UPF3A-201ENST00000351487 ZNF17P17021 662 aa19.56■□□□□ 0.72
UPF3A-201ENST00000351487 POU3F2P20265 443 aaPredicted RBP19.56■□□□□ 0.72
UPF3A-201ENST00000351487 CD34P28906 385 aa19.56■□□□□ 0.72
UPF3A-201ENST00000351487 CX3CR1P49238 355 aa19.56■□□□□ 0.72
UPF3A-201ENST00000351487 GRB2P62993 217 aaKnown RBP19.56■□□□□ 0.72
UPF3A-201ENST00000351487 H3F3AP84243 136 aa19.56■□□□□ 0.72
UPF3A-201ENST00000351487 OR6K3Q8NGY3 331 aa19.56■□□□□ 0.72
UPF3A-201ENST00000351487 RBPMSQ93062 196 aaKnown RBP19.56■□□□□ 0.72
UPF3A-201ENST00000351487 DHRS9Q9BPW9 319 aa19.56■□□□□ 0.72
UPF3A-201ENST00000351487 MFFQ9GZY8 342 aa19.56■□□□□ 0.72
UPF3A-201ENST00000351487 LPAR5Q9H1C0 372 aa19.56■□□□□ 0.72
UPF3A-201ENST00000351487 IL2RAP01589 272 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 CSN2P05814 226 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 SLC2A1P11166 492 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 GNB3P16520 340 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 ZBTB25P24278 435 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 CASRP41180 1078 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 FGL1Q08830 312 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 GK2Q14410 553 aaPredicted RBP19.55■□□□□ 0.72
UPF3A-201ENST00000351487 OR52W1Q6IF63 320 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 OPN5Q6U736 354 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 C17orf107Q6ZR85 190 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 LYG2Q86SG7 212 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 IMMP1LQ96LU5 166 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 SOX7Q9BT81 388 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 NARFLQ9H6Q4 476 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 IFT46Q9NQC8 304 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 RDH8Q9NYR8 311 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 MED12Q93074 2177 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 NCOA6Q14686 2063 aaPredicted RBP19.55■□□□□ 0.72
UPF3A-201ENST00000351487 SSX5O60225 188 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 HLA-GP17693 338 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 CTSSP25774 331 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 MPGP29372 298 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 AGTR1P30556 359 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 LSM6P62312 80 aaKnown RBP19.55■□□□□ 0.72
UPF3A-201ENST00000351487 FAHD2BQ6P2I3 314 aaPredicted RBP19.55■□□□□ 0.72
UPF3A-201ENST00000351487 TMEM65Q6PI78 240 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 DOK3Q7L591 496 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 COMMD2Q86X83 199 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 BEST3Q8N1M1 668 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 FAHD2AQ96GK7 314 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 SELENOIQ9C0D9 397 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 ZNF700Q9H0M5 742 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 GPN3Q9UHW5 284 aaPredicted RBP19.55■□□□□ 0.72
UPF3A-201ENST00000351487 ANAPC10Q9UM13 185 aa19.55■□□□□ 0.72
UPF3A-201ENST00000351487 MRPS28Q9Y2Q9 187 aaKnown RBP19.55■□□□□ 0.72
UPF3A-201ENST00000351487 GDF9O60383 454 aa19.54■□□□□ 0.72
UPF3A-201ENST00000351487 UMODP07911 640 aa19.54■□□□□ 0.72
UPF3A-201ENST00000351487 CELA2AP08217 269 aa19.54■□□□□ 0.72
UPF3A-201ENST00000351487 ANOS1P23352 680 aa19.54■□□□□ 0.72
UPF3A-201ENST00000351487 CLDN17P56750 224 aa19.54■□□□□ 0.72
UPF3A-201ENST00000351487 EXT1Q16394 746 aa19.54■□□□□ 0.72
UPF3A-201ENST00000351487 SLC22A6Q4U2R8 563 aa19.54■□□□□ 0.72
UPF3A-201ENST00000351487 RGS7BPQ6MZT1 257 aaPredicted RBP19.54■□□□□ 0.72
UPF3A-201ENST00000351487 ALKAL2Q6UX46 152 aa19.54■□□□□ 0.72
UPF3A-201ENST00000351487 ZNF101Q8IZC7 436 aa19.54■□□□□ 0.72
UPF3A-201ENST00000351487 SSC4DQ8WTU2 575 aa19.54■□□□□ 0.72
UPF3A-201ENST00000351487 NTNG2Q96CW9 530 aa19.54■□□□□ 0.72
UPF3A-201ENST00000351487 REG4Q9BYZ8 158 aa19.54■□□□□ 0.72
UPF3A-201ENST00000351487 KCNK7Q9Y2U2 307 aa19.54■□□□□ 0.72
UPF3A-201ENST00000351487 NOP16Q9Y3C1 178 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms