RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 SLC25A1P53007 311 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 PRPS1P60891 318 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 RAP1BP61224 184 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 TAF10Q12962 218 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 C2orf76Q3KRA6 126 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 FAM78AQ5JUQ0 283 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 KMT5CQ86Y97 462 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 ZNF679Q8IYX0 411 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 LILRA3Q8N6C8 439 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-203ENST00000349748 OR51A4Q8NGJ6 313 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 C16orf58Q96GQ5 468 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 VPS25Q9BRG1 176 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 SGPP1Q9BX95 441 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 OR8D2Q9GZM6 311 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 OR52A1Q9UKL2 312 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 FCF1Q9Y324 198 aaKnown RBP9.54□□□□□ -0.88
CAPN3-203ENST00000349748 XKRY2A2RUG3 117 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 XKRYO14609 159 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 P2RX6O15547 441 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 DOK2O60496 412 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 SRPX2O60687 465 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-203ENST00000349748 STK17BO94768 372 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 IGLV3-27P01718 113 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 CX3CR1P49238 355 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 UCP2P55851 309 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 DEFB103AP81534 67 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 COL10A1Q03692 680 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 SMIM15Q7Z3B0 74 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 CMTM1Q8IZ96 169 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 SYS1Q8N2H4 156 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 COMMD1Q8N668 190 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 SUN3Q8TAQ9 357 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 HLA-CQ95604 372 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 FBXO32Q969P5 355 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 COL26A1Q96A83 441 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 RCC1LQ96I51 464 aaKnown RBP9.54□□□□□ -0.88
CAPN3-203ENST00000349748 TP53RKQ96S44 253 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 ULBP3Q9BZM4 244 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 DPEP2Q9H4A9 486 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 HSD17B6O14756 317 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 SMPD2O60906 423 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 SLCO2B1O94956 709 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 OR5AC1P0C628 307 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 GLIPR1P48060 266 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 SELENOTP62341 195 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 CCL20P78556 96 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 NXPE4Q6UWF7 544 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 Q6ZVH6 145 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 NUFIP2Q7Z417 695 aaKnown RBP9.53□□□□□ -0.88
CAPN3-203ENST00000349748 GVQW1Q8N7I0 195 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 BADQ92934 168 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 CDC6Q99741 560 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 PBDC1Q9BVG4 233 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 MAGEH1Q9H213 219 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 NEUROD4Q9HD90 331 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 RNF24Q9Y225 148 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 CDH23Q9H251 3354 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 H3BNC9 293 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 CEACAM1P13688 526 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 IMPA1P29218 277 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 CYCSP99999 105 aaKnown RBP9.53□□□□□ -0.88
CAPN3-203ENST00000349748 Q499Y3 187 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 ZNF880Q6PDB4 577 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 C1orf87Q8N0U7 546 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 SLC24A4Q8NFF2 622 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 OR4K13Q8NH42 304 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 FAM174AQ8TBP5 190 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 ANKRD9Q96BM1 317 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-203ENST00000349748 ARHGDIGQ99819 225 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 GINS3Q9BRX5 216 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 ALKBH7Q9BT30 221 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-203ENST00000349748 SH3BGRL3Q9H299 93 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 SEPSECSQ9HD40 501 aaKnown RBP9.53□□□□□ -0.88
CAPN3-203ENST00000349748 B3GAT1Q9P2W7 334 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 RNF150Q9ULK6 438 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 VWA8A3KMH1 1905 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 PDE4DIPQ5VU43 2346 aa9.53□□□□□ -0.88
CAPN3-203ENST00000349748 PLXND1Q9Y4D7 1925 aa9.52□□□□□ -0.88
CAPN3-203ENST00000349748 F5H5T6 163 aa9.52□□□□□ -0.88
CAPN3-203ENST00000349748 J3QW42 95 aa9.52□□□□□ -0.88
CAPN3-203ENST00000349748 ERAL1O75616 437 aaKnown RBP9.52□□□□□ -0.88
CAPN3-203ENST00000349748 EOMESO95936 686 aa9.52□□□□□ -0.88
CAPN3-203ENST00000349748 CD160O95971 181 aa9.52□□□□□ -0.88
CAPN3-203ENST00000349748 TIMP1P01033 207 aa9.52□□□□□ -0.88
CAPN3-203ENST00000349748 OR2T7P0C7T2 308 aa9.52□□□□□ -0.88
CAPN3-203ENST00000349748 NID1P14543 1247 aa9.52□□□□□ -0.88
CAPN3-203ENST00000349748 PI3P19957 117 aa9.52□□□□□ -0.88
CAPN3-203ENST00000349748 RPL4P36578 427 aaKnown RBP9.52□□□□□ -0.88
CAPN3-203ENST00000349748 IDH3GP51553 393 aaPredicted RBP9.52□□□□□ -0.88
CAPN3-203ENST00000349748 TMEM33P57088 247 aa9.52□□□□□ -0.88
CAPN3-203ENST00000349748 SLC35A1P78382 337 aa9.52□□□□□ -0.88
CAPN3-203ENST00000349748 SPEM2Q0P670 501 aa9.52□□□□□ -0.88
CAPN3-203ENST00000349748 TDRG1Q3Y452 100 aa9.52□□□□□ -0.88
CAPN3-203ENST00000349748 Q5PR19 223 aa9.52□□□□□ -0.88
CAPN3-203ENST00000349748 RNF219Q5W0B1 726 aaPredicted RBP9.52□□□□□ -0.88
CAPN3-203ENST00000349748 SLC35D2Q76EJ3 337 aa9.52□□□□□ -0.88
CAPN3-203ENST00000349748 C16orf59Q7L2K0 433 aa9.52□□□□□ -0.88
CAPN3-203ENST00000349748 GRASPQ7Z6J2 395 aaPredicted RBP9.52□□□□□ -0.88
CAPN3-203ENST00000349748 ZNF429Q86V71 674 aa9.52□□□□□ -0.88
CAPN3-203ENST00000349748 OR52E2Q8NGJ4 325 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms