RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 HHLA2Q9UM44 414 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 A0A087WV62 115 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 CCDC187A0A096LP49 1063 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 PRAMEF27A3QJZ7 478 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 C7orf77A4D0Y5 90 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 PRAMEF25A6NGN4 478 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 ZNF727A8MUV8 499 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 XRCC3O43542 346 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 PRAMEF4O60810 478 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 EPHA2P29317 976 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 GSG1Q2KHT4 349 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 PRAMEF9Q5VWM5 478 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 BCDIN3DQ7Z5W3 292 aaKnown RBP10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 ELSPBP1Q96BH3 223 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 MRPS24Q96EL2 167 aaKnown RBP10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 COA4Q9NYJ1 87 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 TBC1D29Q9UFV1 150 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 ZMIZ1Q9ULJ6 1067 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 CLDN16Q9Y5I7 305 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 TGIF2-C20orf24A0A0A6YYL0 155 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 MSTNO14793 375 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 EIF4EP06730 217 aaKnown RBP10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 GLB1P16278 677 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 PMCHP20382 165 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 CD27P26842 260 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 DPP4P27487 766 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 RFX2P48378 723 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 ESPNLQ6ZVH7 1005 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 OR5D18Q8NGL1 313 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 OR4K15Q8NH41 348 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 APH1AQ96BI3 265 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 ZNF681Q96N22 645 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 AMDHD1Q96NU7 426 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 CDCA4Q9BXL8 241 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 RIMS4Q9H426 269 aaPredicted RBP10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 TINAGQ9UJW2 476 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 SNX11Q9Y5W9 270 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 PRRC2BQ5JSZ5 2229 aaKnown RBP10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 TMED7-TICAM2A0A0A6YYA0 188 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 TRAPPC2LH3BP13 241 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 DDAH2O95865 285 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 SULT1A3P0DMM9 295 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 SULT1A4P0DMN0 295 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 PRSS45Q7RTY3 260 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 SPNS2Q8IVW8 549 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 LCORQ96JN0 433 aaPredicted RBP10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 NMNAT3Q96T66 252 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 TMED7Q9Y3B3 224 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 PAM16Q9Y3D7 125 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 IGLV3-10A0A075B6K4 115 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 CT45A8P0DMV1 189 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 CT45A9P0DMV2 189 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 NPPBP16860 134 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 SHC1P29353 583 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 TRHRP34981 398 aaPredicted RBP10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 CLDN12P56749 244 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 GAMTQ14353 236 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 GUCA2BQ16661 112 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 CT45A2Q5DJT8 189 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 Q6ZSR9 355 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 PUSL1Q8N0Z8 303 aaKnown RBP10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 OR52I1Q8NGK6 324 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 M1APQ8TC57 530 aa10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 ZNF48Q96MX3 618 aaPredicted RBP10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 ZNF587Q96SQ5 575 aaPredicted RBP10.09□□□□□ -0.79
SMARCE1-202ENST00000348513 TLCD2A6NGC4 264 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 SLC25A17O43808 307 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 TIMM8AO60220 97 aaPredicted RBP10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 IGHV3-9P01782 118 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 FCGR2AP12318 317 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 SLC35A1P78382 337 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 DHRS11Q6UWP2 260 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 PKD1L3Q7Z443 1732 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 UBE2ZQ9H832 354 aaPredicted RBP10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 NRIP3Q9NQ35 241 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 OR52A1Q9UKL2 312 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 MMACHCQ9Y4U1 282 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 A0A1W2PN81 502 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 C5orf52A6NGY3 159 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 MFNGO00587 321 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 CBR3O75828 277 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 KITLGP21583 273 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 CHRNA7P36544 502 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 TMEM267Q0VDI3 215 aaPredicted RBP10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 SLC14A1Q13336 389 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 TMEM207Q6UWW9 146 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 TMEM108Q6UXF1 575 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 ZNF485Q8NCK3 441 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 PPP1R35Q8TAP8 253 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 SLC39A9Q9NUM3 307 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 ING1Q9UK53 422 aaPredicted RBP10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 TMED3Q9Y3Q3 217 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 A0A1W2PNV4 684 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 DVL1O14640 695 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 SLCO2B1O94956 709 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 SLC19A1P41440 591 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 HINT1P49773 126 aaPredicted RBP10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 KLF3P57682 345 aaPredicted RBP10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 MIDNQ504T8 468 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 ANKRD33Q7Z3H0 272 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms