RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 NPAS1Q99742 590 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 MS4A7Q9GZW8 240 aaPredicted RBP15.82■□□□□ 0.12
SPAST-202ENST00000345662 PBOV1Q9GZY1 135 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 SERTM1A2A2V5 107 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 CTRB1P17538 263 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 CTRB2Q6GPI1 263 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 TRILQ7L0X0 811 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 OR5M9Q8NGP3 310 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 TXNIPQ9H3M7 391 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 CD22P20273 847 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 FPR2P25090 351 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 DEFB103AP81534 67 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 SLC10A1Q14973 349 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 PRAMEF20Q5VT98 475 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 ZDHHC11Q9H8X9 412 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 POMT1Q9Y6A1 747 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 ZFPL1O95159 310 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 KIRREL2Q6UWL6 708 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 SEZ6L2Q6UXD5 910 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 ZNF66Q6ZN08 573 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 C17orf47Q8NEP4 570 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 LAT2Q9GZY6 243 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 UCK1Q9HA47 277 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 NTMQ9P121 344 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 GHRLQ9UBU3 117 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 RCL1Q9Y2P8 373 aaKnown RBP15.81■□□□□ 0.12
SPAST-202ENST00000345662 KCNE3Q9Y6H6 103 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 LRP5O75197 1615 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 SEC14L6B5MCN3 397 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 CLDN34H7C241 214 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 RFC3P40938 356 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 EMDP50402 254 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 TPPP2P59282 170 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 OR2A2Q6IF42 318 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 S100A7AQ86SG5 101 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 ZNF426Q9BUY5 554 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 MAGT1Q9H0U3 335 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 WSB1Q9Y6I7 421 aa15.81■□□□□ 0.12
SPAST-202ENST00000345662 SAT2Q96F10 170 aaPredicted RBP15.8■□□□□ 0.12
SPAST-202ENST00000345662 C1QTNF6Q9BXI9 259 aa15.8■□□□□ 0.12
SPAST-202ENST00000345662 MIOXQ9UGB7 285 aa15.8■□□□□ 0.12
SPAST-202ENST00000345662 COL22A1Q8NFW1 1626 aaPredicted RBP15.8■□□□□ 0.12
SPAST-202ENST00000345662 A0A0A6YYD5 115 aa15.8■□□□□ 0.12
SPAST-202ENST00000345662 C9orf170A2RU37 121 aa15.8■□□□□ 0.12
SPAST-202ENST00000345662 CTAG2O75638 210 aa15.8■□□□□ 0.12
SPAST-202ENST00000345662 ZNF687Q8N1G0 1237 aa15.8■□□□□ 0.12
SPAST-202ENST00000345662 INTS12Q96CB8 462 aaKnown RBP15.8■□□□□ 0.12
SPAST-202ENST00000345662 MS4A4AQ96JQ5 239 aa15.8■□□□□ 0.12
SPAST-202ENST00000345662 NSG1A0A0A6YYJ2 146 aa15.8■□□□□ 0.12
SPAST-202ENST00000345662 PCBP3P57721 371 aaKnown RBP15.8■□□□□ 0.12
SPAST-202ENST00000345662 H2BFWTQ7Z2G1 175 aa15.8■□□□□ 0.12
SPAST-202ENST00000345662 ABI3BPQ7Z7G0 1075 aa15.8■□□□□ 0.12
SPAST-202ENST00000345662 WBP2Q969T9 261 aa15.8■□□□□ 0.12
SPAST-202ENST00000345662 TEX101Q9BY14 249 aa15.8■□□□□ 0.12
SPAST-202ENST00000345662 ADGRL4Q9HBW9 690 aa15.8■□□□□ 0.12
SPAST-202ENST00000345662 LHX6Q9UPM6 363 aa15.8■□□□□ 0.12
SPAST-202ENST00000345662 CD63P08962 238 aa15.8■□□□□ 0.12
SPAST-202ENST00000345662 VWA2Q5GFL6 755 aa15.8■□□□□ 0.12
SPAST-202ENST00000345662 OR2AE1Q8NHA4 323 aa15.8■□□□□ 0.12
SPAST-202ENST00000345662 OR8B4Q96RC9 309 aa15.8■□□□□ 0.12
SPAST-202ENST00000345662 VAMP8Q9BV40 100 aa15.8■□□□□ 0.12
SPAST-202ENST00000345662 PARD6AQ9NPB6 346 aa15.8■□□□□ 0.12
SPAST-202ENST00000345662 MTCH1Q9NZJ7 389 aa15.8■□□□□ 0.12
SPAST-202ENST00000345662 DHCR7Q9UBM7 475 aaKnown RBP15.8■□□□□ 0.12
SPAST-202ENST00000345662 B9D1Q9UPM9 204 aa15.8■□□□□ 0.12
SPAST-202ENST00000345662 SHROOM3Q8TF72 1996 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 SERPINE3A8MV23 424 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 TBX19O60806 448 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 NXPH2O95156 264 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 ZIC2O95409 532 aaPredicted RBP15.79■□□□□ 0.12
SPAST-202ENST00000345662 COX5AP20674 150 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 RBMXL3Q8N7X1 1067 aaKnown RBP15.79■□□□□ 0.12
SPAST-202ENST00000345662 OR51F2Q8NH61 342 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 SLC25A43Q8WUT9 341 aaPredicted RBP15.79■□□□□ 0.12
SPAST-202ENST00000345662 SEC11CQ9BY50 192 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 CREBZFQ9NS37 354 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 GABRA2P47869 451 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 MLF1P58340 268 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 IFITM2Q01629 132 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 DHODHQ02127 395 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 ACOT6Q3I5F7 207 aaPredicted RBP15.79■□□□□ 0.12
SPAST-202ENST00000345662 THEM4Q5T1C6 240 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 ZNF813Q6ZN06 617 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 ZNF574Q6ZN55 896 aaPredicted RBP15.79■□□□□ 0.12
SPAST-202ENST00000345662 FAM3CQ92520 227 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 RSRP1Q9BUV0 290 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 MBNL1Q9NR56 388 aaKnown RBP15.79■□□□□ 0.12
SPAST-202ENST00000345662 OPN4Q9UHM6 478 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 HPXP02790 462 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 CD96P40200 585 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 PRSS54Q6PEW0 395 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 OR10P1Q8NGE3 313 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 KIF13AQ9H1H9 1805 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 WNT11O96014 354 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 INPP5JQ15735 1006 aaPredicted RBP15.79■□□□□ 0.12
SPAST-202ENST00000345662 TUSC1Q2TAM9 212 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 OTOSQ8NHW6 89 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 CCDC74AQ96AQ1 378 aa15.79■□□□□ 0.12
SPAST-202ENST00000345662 KRTDAPP60985 99 aa15.78■□□□□ 0.12
SPAST-202ENST00000345662 ELAVL1Q15717 326 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms