RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 GNB2P62879 340 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 OCLNQ16625 522 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 ZNF181Q2M3W8 571 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 KRTAP27-1Q3LI81 207 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 FAM201AQ5SY85 155 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 OR2T5Q6IEZ7 315 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 LYPD4Q6UWN0 246 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 BTNL3Q6UXE8 466 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 COLCA1Q6ZS62 124 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 RASSF6Q6ZTQ3 369 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 SPATC1Q76KD6 591 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 DCXRQ7Z4W1 244 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 ARHGAP24Q8N264 748 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 LNX2Q8N448 690 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 BOLLQ8N9W6 283 aaKnown RBP10.41□□□□□ -0.74
SGCA-202ENST00000344627 ZNF511Q8NB15 262 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 CCDC197Q8NCU1 140 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 DEFB108BQ8NET1 73 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 OR4C15Q8NGM1 316 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 OR8D4Q8NGM9 314 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 OR6K6Q8NGW6 343 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 OR11L1Q8NGX0 322 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 OR2T29Q8NH02 315 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 CCDC124Q96CT7 223 aaKnown RBP10.41□□□□□ -0.74
SGCA-202ENST00000344627 PLEKHA8Q96JA3 519 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 MAP6Q96JE9 813 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 SSBP3Q9BWW4 388 aaPredicted RBP10.41□□□□□ -0.74
SGCA-202ENST00000344627 MUC13Q9H3R2 512 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 MAGIXQ9H6Y5 334 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 TMEM165Q9HC07 324 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 PNRC2Q9NPJ4 139 aaKnown RBP10.41□□□□□ -0.74
SGCA-202ENST00000344627 ARMC1Q9NVT9 282 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 MIOXQ9UGB7 285 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 TCRBV5S2A0A599 114 aa10.4□□□□□ -0.74
SGCA-202ENST00000344627 F5H0A9 414 aaPredicted RBP10.4□□□□□ -0.74
SGCA-202ENST00000344627 ZNF593O00488 134 aaPredicted RBP10.4□□□□□ -0.74
SGCA-202ENST00000344627 WNT2P09544 360 aa10.4□□□□□ -0.74
SGCA-202ENST00000344627 CALB2P22676 271 aa10.4□□□□□ -0.74
SGCA-202ENST00000344627 CA6P23280 308 aa10.4□□□□□ -0.74
SGCA-202ENST00000344627 ENTPD1P49961 510 aa10.4□□□□□ -0.74
SGCA-202ENST00000344627 CRMP1Q14194 572 aa10.4□□□□□ -0.74
SGCA-202ENST00000344627 TRIM25Q14258 630 aaKnown RBP10.4□□□□□ -0.74
SGCA-202ENST00000344627 MICAQ29983 383 aa10.4□□□□□ -0.74
SGCA-202ENST00000344627 SNAI3Q3KNW1 292 aa10.4□□□□□ -0.74
SGCA-202ENST00000344627 PRAMEF6Q5VXH4 476 aa10.4□□□□□ -0.74
SGCA-202ENST00000344627 LCN8Q6JVE9 175 aa10.4□□□□□ -0.74
SGCA-202ENST00000344627 KLBQ86Z14 1044 aa10.4□□□□□ -0.74
SGCA-202ENST00000344627 C19orf18Q8NEA5 215 aa10.4□□□□□ -0.74
SGCA-202ENST00000344627 OR2T33Q8NG76 320 aa10.4□□□□□ -0.74
SGCA-202ENST00000344627 OR8B3Q8NGG8 313 aa10.4□□□□□ -0.74
SGCA-202ENST00000344627 OR4Q3Q8NH05 313 aa10.4□□□□□ -0.74
SGCA-202ENST00000344627 OR2AE1Q8NHA4 323 aa10.4□□□□□ -0.74
SGCA-202ENST00000344627 ZNRF4Q8WWF5 429 aa10.4□□□□□ -0.74
SGCA-202ENST00000344627 ERGIC1Q969X5 290 aa10.4□□□□□ -0.74
SGCA-202ENST00000344627 OR8B2Q96RD0 313 aa10.4□□□□□ -0.74
SGCA-202ENST00000344627 TMEM246Q9BRR3 403 aa10.4□□□□□ -0.74
SGCA-202ENST00000344627 MS4A7Q9GZW8 240 aaPredicted RBP10.4□□□□□ -0.74
SGCA-202ENST00000344627 ESM1Q9NQ30 184 aa10.4□□□□□ -0.74
SGCA-202ENST00000344627 VNN3Q9NY84 501 aa10.4□□□□□ -0.74
SGCA-202ENST00000344627 BAIAP2Q9UQB8 552 aa10.4□□□□□ -0.74
SGCA-202ENST00000344627 NOP16Q9Y3C1 178 aaKnown RBP10.4□□□□□ -0.74
SGCA-202ENST00000344627 PPIAL4AQ9Y536 164 aa10.4□□□□□ -0.74
SGCA-202ENST00000344627 IGHV3OR16-10A0A075B7F0 116 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 RIIAD1A6NNX1 92 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 CD300LBA8K4G0 201 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 H3BN98 237 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 GNGT2O14610 69 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 TMPRSS2O15393 492 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 TBX1O43435 398 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 WIPF1O43516 503 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 FAM20BO75063 409 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 ANXA2P07355 339 aaKnown RBP10.39□□□□□ -0.75
SGCA-202ENST00000344627 CLUP10909 449 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 SLC2A1P11166 492 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 ZNF3P17036 446 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 SPI1P17947 270 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 POU1F1P28069 291 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 PMELP40967 661 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 MAGEA2P43356 314 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 MS4A2Q01362 244 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 ZNF92Q03936 586 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 PAX8Q06710 450 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 BAMBIQ13145 260 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 ZNF362Q5T0B9 420 aaPredicted RBP10.39□□□□□ -0.75
SGCA-202ENST00000344627 ZNF770Q6IQ21 691 aaPredicted RBP10.39□□□□□ -0.75
SGCA-202ENST00000344627 DRAM2Q6UX65 266 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 NLRC3Q7RTR2 1065 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 SIGLECL1Q8N7X8 197 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 OR10G2Q8NGC3 310 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 TEX47Q8TBZ9 253 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 SLAMF6Q96DU3 332 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 NEIL1Q96FI4 390 aaPredicted RBP10.39□□□□□ -0.75
SGCA-202ENST00000344627 CLPTM1LQ96KA5 538 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 DDOQ99489 341 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 THTPAQ9BU02 230 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 ADAT1Q9BUB4 502 aaKnown RBP10.39□□□□□ -0.75
SGCA-202ENST00000344627 FN3KRPQ9HA64 309 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 COMMD3-BMI1R4GMX3 469 aa10.39□□□□□ -0.75
SGCA-202ENST00000344627 A6NLC8 198 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 FAM107AO95990 144 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms