RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 PTRH2Q9Y3E5 179 aaKnown RBP3.44□□□□□ -1.86
SYNE2-202ENST00000344113 C2orf72A6NCS6 295 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF727A8MUV8 499 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 CNIH1O95406 144 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 ADIPOQQ15848 244 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 TM4SF20Q53R12 229 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 CST9Q5W186 159 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF385CQ66K41 422 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-202ENST00000344113 LCTLQ6UWM7 567 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 OR1S1Q8NH92 325 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 MS4A8Q9BY19 250 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 ELOVL4Q9GZR5 314 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 NXF5Q9H1B4 397 aaKnown RBP3.44□□□□□ -1.86
SYNE2-202ENST00000344113 AKTIPQ9H8T0 292 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF728P0DKX0 622 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 ELAVL2Q12926 359 aaKnown RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 CELF2-AS1Q8N7Q2 184 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 NPY6RQ99463 290 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 ERCC6L2Q5T890 1561 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 IL10RBQ08334 325 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 AQP6Q13520 282 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 CTSL3PQ5NE16 218 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 OR2L13Q8N349 312 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 MRAPQ8TCY5 172 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 SAP30LQ9HAJ7 183 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 PCNX1Q96RV3 2341 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 PF4V1P10720 104 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 GALR1P47211 349 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 RPS26P11Q5JNZ5 115 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 ANKRD33Q7Z3H0 272 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 H1FOOQ8IZA3 346 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 OR2T10Q8NGZ9 312 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 ESAMQ96AP7 390 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 FOXJ3Q9UPW0 622 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 URGCP-MRPS24S4R325 110 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF354AO60765 605 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 SELLP14151 372 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 DOK4Q8TEW6 326 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 OR1A1Q9P1Q5 309 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 HIDE1A8MVS5 230 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 SIX3O95343 332 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 ACRP10323 421 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 DNASE2BQ8WZ79 361 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 P2RX4Q99571 388 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 GABRDO14764 452 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 SPATA31C1P0DKV0 1188 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 CTSEP14091 401 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 HLA-DRB3P79483 266 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 ODF4Q2M2E3 257 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 TMIGD1Q6UXZ0 262 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 OR4D9Q8NGE8 314 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 PTX4Q96A99 478 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 OR6C1Q96RD1 312 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 RAB40CQ96S21 281 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 PCDHGC4Q9Y5F7 938 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 CD74P04233 296 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 SLC25A5P05141 298 aaKnown RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 AREGP15514 252 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 MPLP40238 635 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 TMPRSS12Q86WS5 348 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 A4GNTQ9UNA3 340 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 WSB1Q9Y6I7 421 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 HSPB6O14558 160 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 EPHB6O15197 1021 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 SLC16A7O60669 478 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 RAMP3O60896 148 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 UMODP07911 640 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 SLC35G4P0C7Q5 338 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 LHX2P50458 406 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 C19orf47Q8N9M1 422 aaKnown RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 OR9Q2Q8NGE9 314 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 ZBTB3Q9H5J0 574 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 A0A1W2PQ45 241 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 A0A1W2PQY0 241 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 MEX3AA1L020 520 aaKnown RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 FGF16O43320 207 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 RHOBP62745 196 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 C11orf87Q6NUJ2 197 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 OR52E2Q8NGJ4 325 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 SPSB1Q96BD6 273 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 CNTD2Q9H8S5 307 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 GABRQQ9UN88 632 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 COLCA2A8K830 154 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 TMEM238C9JI98 176 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 REG1AP05451 166 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 ERGP11308 486 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 RPL7AP62424 266 aaKnown RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 MRPL49Q13405 166 aaKnown RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 PRAMEF19Q5SWL8 479 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 PEAR1Q5VY43 1037 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF467Q7Z7K2 595 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 BPIFA4PQ86YQ2 179 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 NAA60Q9H7X0 242 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 MRPL16Q9NX20 251 aaKnown RBP3.43□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF43P17038 809 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 PSMB4P28070 264 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 AKR1C3P42330 323 aa3.43□□□□□ -1.86
SYNE2-202ENST00000344113 RPS26P62854 115 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms