RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 TMEM104Q8NE00 496 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 STEAP2Q8NFT2 490 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 SLC25A43Q8WUT9 341 aaPredicted RBP13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 SLC25A21Q9BQT8 299 aaPredicted RBP13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 ZNF416Q9BWM5 594 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 SLCO5A1Q9H2Y9 848 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 ZNF160Q9HCG1 818 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 PNRC2Q9NPJ4 139 aaKnown RBP13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 VSIG4Q9Y279 399 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 HDGFL3Q9Y3E1 203 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 HS3ST3B1Q9Y662 390 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 A0A1W2PP11 408 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 E9PLN8 166 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 CCSO14618 274 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 BPNT1O95861 308 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 COX6A1P12074 109 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 ZNF250P15622 560 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 HRH1P35367 487 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 SLC35A1P78382 337 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 QRFPP83859 136 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 IL11RAQ14626 422 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 HLXQ14774 488 aaPredicted RBP13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 RAB12Q6IQ22 244 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 TMUB2Q71RG4 321 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 TMEM156Q8N614 296 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 AGBL5Q8NDL9 886 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 OR5D18Q8NGL1 313 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 PTX4Q96A99 478 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 ZNF385AQ96PM9 386 aaKnown RBP13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 GSX2Q9BZM3 304 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 NOP16Q9Y3C1 178 aaKnown RBP13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 BDP1A6H8Y1 2624 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 C9J4A7 227 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 F5H5K5 113 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 PMS2P2O95744 297 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 HLA-AP01891 365 aaKnown RBP13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 CD74P04233 296 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 S100A11P31949 105 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 SLC6A9P48067 706 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 DHRS2Q13268 280 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 CAMK2BQ13554 666 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 LRRC37A5PQ49AS3 106 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 PHYHD1Q5SRE7 291 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 TMEM41AQ96HV5 264 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 GPER1Q99527 375 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 UQCC2Q9BRT2 126 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 C1QTNF6Q9BXI9 259 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 TMPRSS13Q9BYE2 586 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 SMOC1Q9H4F8 434 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 WDR54Q9H977 334 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 PISDQ9UG56 409 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 DKKL1Q9UK85 242 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 NXT1Q9UKK6 140 aaKnown RBP13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 MRPS28Q9Y2Q9 187 aaKnown RBP13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 AHCTF1Q8WYP5 2266 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 DISC1C4P0D8 188 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 KLF7O75840 302 aaPredicted RBP13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 SCO1O75880 301 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 CRYZL1O95825 349 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 PPP3CBP16298 524 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 CSNK1A1P48729 337 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 LPAL2Q16609 132 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 OPN5Q6U736 354 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 HDDC2Q7Z4H3 204 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 OR5AS1Q8N127 324 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 COQ8AQ8NI60 647 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 ZBTB8AQ96BR9 441 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 KCNN3Q9UGI6 736 aa13.15□□□□□ -0.3
VIPAS39-202ENST00000343765 TEX46H3BTG2 121 aa13.15□□□□□ -0.31
VIPAS39-202ENST00000343765 H3BUI4 141 aa13.15□□□□□ -0.31
VIPAS39-202ENST00000343765 TLX3O43711 291 aaPredicted RBP13.15□□□□□ -0.31
VIPAS39-202ENST00000343765 RP2O75695 350 aa13.15□□□□□ -0.31
VIPAS39-202ENST00000343765 LY6G6FQ5SQ64 297 aa13.15□□□□□ -0.31
VIPAS39-202ENST00000343765 LIN37Q96GY3 246 aaPredicted RBP13.15□□□□□ -0.31
VIPAS39-202ENST00000343765 IMMP1LQ96LU5 166 aa13.15□□□□□ -0.31
VIPAS39-202ENST00000343765 MOB1AQ9H8S9 216 aa13.15□□□□□ -0.31
VIPAS39-202ENST00000343765 KCNK7Q9Y2U2 307 aa13.15□□□□□ -0.31
VIPAS39-202ENST00000343765 LOC102723996A0A087X1L8 192 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 PMP2P02689 132 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 ZNF17P17021 662 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 ADH6P28332 368 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 CD34P28906 385 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 CD96P40200 585 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 GUCA1AP43080 201 aaPredicted RBP13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 SSR4P51571 173 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 CCDC157Q569K6 752 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 ZNF468Q5VIY5 522 aaPredicted RBP13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 GTPBP8Q8N3Z3 284 aaPredicted RBP13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 OR10R2Q8NGX6 335 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 SLC39A7Q92504 469 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 PGAM5Q96HS1 289 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 ALX4Q9H161 411 aaPredicted RBP13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 AUP1Q9Y679 476 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 A0A0A6YYD4 124 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 OR5H15A6NDH6 313 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 NPIPA2E9PIF3 369 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 NPIPA3F8WFD2 350 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 SOCS1O15524 211 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 PDGFAP04085 211 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 ERCC1P07992 297 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms