RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 SNNO75324 88 aaPredicted RBP16.13■□□□□ 0.17
SMAD4-201ENST00000342988 ALOX5APP20292 161 aa16.13■□□□□ 0.17
SMAD4-201ENST00000342988 ZNF542PQ5EBM4 170 aa16.13■□□□□ 0.17
SMAD4-201ENST00000342988 UMODL1-AS1Q8N2C9 162 aa16.13■□□□□ 0.17
SMAD4-201ENST00000342988 RNF2Q99496 336 aa16.13■□□□□ 0.17
SMAD4-201ENST00000342988 TFAP2AP05549 437 aa16.13■□□□□ 0.17
SMAD4-201ENST00000342988 GP2P55259 537 aaKnown RBP16.13■□□□□ 0.17
SMAD4-201ENST00000342988 ANAPC16Q96DE5 110 aa16.13■□□□□ 0.17
SMAD4-201ENST00000342988 COX19Q49B96 90 aa16.13■□□□□ 0.17
SMAD4-201ENST00000342988 NMNAT3Q96T66 252 aa16.13■□□□□ 0.17
SMAD4-201ENST00000342988 MANBALQ9NQG1 85 aa16.13■□□□□ 0.17
SMAD4-201ENST00000342988 RBP4P02753 201 aa16.13■□□□□ 0.17
SMAD4-201ENST00000342988 PIGPP57054 158 aa16.13■□□□□ 0.17
SMAD4-201ENST00000342988 SLC45A2Q9UMX9 530 aa16.13■□□□□ 0.17
SMAD4-201ENST00000342988 SCRG1O75711 98 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 C19orf47Q8N9M1 422 aaKnown RBP16.12■□□□□ 0.17
SMAD4-201ENST00000342988 PERPQ96FX8 193 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 SLCO3A1Q9UIG8 710 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 C3P01024 1663 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 F5P12259 2224 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 KCNJ10P78508 379 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 RIGQ13278 110 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 ZNF2Q9BSG1 426 aaPredicted RBP16.12■□□□□ 0.17
SMAD4-201ENST00000342988 C12orf49Q9H741 205 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 ONECUT1Q9UBC0 465 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 SERPINE3A8MV23 424 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 MELTFP08582 738 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 FABP2P12104 132 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 ACAA2P42765 397 aaKnown RBP16.12■□□□□ 0.17
SMAD4-201ENST00000342988 C19orf43Q9BQ61 176 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 NTMT1Q9BV86 223 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 P2RY10O00398 339 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 SOD1P00441 154 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 EXOSC7Q15024 291 aaKnown RBP16.12■□□□□ 0.17
SMAD4-201ENST00000342988 JOSD1Q15040 202 aaPredicted RBP16.12■□□□□ 0.17
SMAD4-201ENST00000342988 SPRYD7Q5W111 196 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 TMEM88Q6PEY1 159 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 C10orf126Q8N4M7 172 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 ACY3Q96HD9 319 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 TEAD3Q99594 435 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 ZNF426Q9BUY5 554 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 ZXDBP98169 803 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 VMA21Q3ZAQ7 101 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 SOX21Q9Y651 276 aaPredicted RBP16.12■□□□□ 0.17
SMAD4-201ENST00000342988 CACNA1BQ00975 2339 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 C1orf105O95561 183 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 P2RY2P41231 377 aa16.12■□□□□ 0.17
SMAD4-201ENST00000342988 C19orf54Q5BKX5 351 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 DCXRQ7Z4W1 244 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 DOK4Q8TEW6 326 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 ISG20Q96AZ6 181 aaKnown RBP16.11■□□□□ 0.17
SMAD4-201ENST00000342988 DUS3LQ96G46 650 aaKnown RBP16.11■□□□□ 0.17
SMAD4-201ENST00000342988 ZNF346Q9UL40 294 aaKnown RBP16.11■□□□□ 0.17
SMAD4-201ENST00000342988 USP22Q9UPT9 525 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 NFS1Q9Y697 457 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 UTS2O95399 124 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 RUNX3Q13761 415 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 SLC25A33Q9BSK2 321 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 MMP15P51511 669 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 CYS1Q717R9 158 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 RHBDL1O75783 438 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 HIST3H3Q16695 136 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 LRRC15Q8TF66 581 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 GDE1Q9NZC3 331 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 TRAV34A0A0B4J273 112 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 NRASP01111 189 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 TCTN1Q2MV58 587 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 OPALINQ96PE5 141 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 TMEM59LQ9UK28 342 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 A0A087X0M5 115 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 A0A1B0GX30 115 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 PRSS38A1L453 326 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 GLTPD2A6NH11 291 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 CORTO00230 105 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 TGIF2LXQ8IUE1 241 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 MED20Q9H944 212 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 PITPNC1Q9UKF7 332 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 NUMBLQ9Y6R0 609 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 ZDBF2Q9HCK1 2354 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 TMEM127O75204 238 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 GUSBP08236 651 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 CFHP08603 1231 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 CLDN12P56749 244 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 VRK3Q8IV63 474 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 NEIL2Q969S2 332 aa16.11■□□□□ 0.17
SMAD4-201ENST00000342988 SNRPGP15A8MWD9 76 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 XRCC2O43543 280 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 MEX3DQ86XN8 651 aaKnown RBP16.1■□□□□ 0.17
SMAD4-201ENST00000342988 C7orf43Q8WVR3 580 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 ZNF768Q9H5H4 540 aaKnown RBP16.1■□□□□ 0.17
SMAD4-201ENST00000342988 ZMAT3Q9HA38 289 aaKnown RBP16.1■□□□□ 0.17
SMAD4-201ENST00000342988 CTSFQ9UBX1 484 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 SALL4Q9UJQ4 1053 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 APOBEC1P41238 236 aaKnown RBP16.1■□□□□ 0.17
SMAD4-201ENST00000342988 KIR3DL2P43630 455 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 CDX1P47902 265 aaPredicted RBP16.1■□□□□ 0.17
SMAD4-201ENST00000342988 EGR3Q06889 387 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 ZNF738Q8NE65 137 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 CLMPQ9H6B4 373 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 CDCA2Q69YH5 1023 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms