RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 ZNF679Q8IYX0 411 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 MAPK1IP1LQ8NDC0 245 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 BPIFB6Q8NFQ5 453 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 OR2Z1Q8NG97 314 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 OR8B12Q8NGG6 310 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 TFAP2CQ92754 450 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 REEP6Q96HR9 211 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 CNBD2Q96M20 576 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 ACOXLQ9NUZ1 547 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 HAO2Q9NYQ3 351 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 TEP1Q99973 2627 aaKnown RBP11.28□□□□□ -0.6
TUBD1-202ENST00000340993 IGLV3-9A0A075B6K5 115 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 GGT3PA6NGU5 568 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 SNTNA6NMZ2 147 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 H0YL77 283 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 J3QLW9 94 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 FAM20BO75063 409 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 PNPP00491 289 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 HPXP02790 462 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 KRT8P05787 483 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 OR2T7P0C7T2 308 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 SELEP16581 610 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 ZNF19P17023 458 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 VHLP40337 213 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 CDK5R2Q13319 367 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 DMRTC1Q5HYR2 192 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 KRTAP1-3Q8IUG1 177 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 OR52I1Q8NGK6 324 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 OR2T27Q8NH04 317 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 SPRYD4Q8WW59 207 aaPredicted RBP11.27□□□□□ -0.61
TUBD1-202ENST00000340993 ASB17Q8WXJ9 295 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 MBD6Q96DN6 1003 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 GSX2Q9BZM3 304 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 ZNF701Q9NV72 531 aaPredicted RBP11.27□□□□□ -0.61
TUBD1-202ENST00000340993 SLC22A13Q9Y226 551 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 PCDHGB5Q9Y5G0 923 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 MED13LQ71F56 2210 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 HIVEP1P15822 2718 aa11.27□□□□□ -0.61
TUBD1-202ENST00000340993 F8P00451 2351 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 DYSFO75923 2080 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 A6NIN4 97 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 H0YAE9 185 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 SMAD7O15105 426 aaKnown RBP11.26□□□□□ -0.61
TUBD1-202ENST00000340993 IGHV3-13P01766 116 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 PPOXP50336 477 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 OR12D2P58182 307 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 PSMA6P60900 246 aaKnown RBP11.26□□□□□ -0.61
TUBD1-202ENST00000340993 MVKQ03426 396 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 SLC25A30Q5SVS4 291 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 LAIR2Q6ISS4 152 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 Q6ZR03 302 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 COLCA1Q6ZS62 124 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 TGIF2LYQ8IUE0 185 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 OR56B2PQ8NGI1 322 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 FAM71F1Q96KD3 344 aaPredicted RBP11.26□□□□□ -0.61
TUBD1-202ENST00000340993 FOXC2Q99958 501 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 ALG8Q9BVK2 526 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 RAB1BQ9H0U4 201 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 OR10A2Q9H208 303 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 PPP1R3EQ9H7J1 279 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 RPL36Q9Y3U8 105 aaKnown RBP11.26□□□□□ -0.61
TUBD1-202ENST00000340993 C17orf100A8MU93 164 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 H7C417 338 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 PHYHO14832 338 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 ICMTO60725 284 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 IGHV1-46P01743 117 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 MMP15P51511 669 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 CLEC12BQ2HXU8 276 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 AHSA2Q719I0 299 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 FAM220AQ7Z4H9 259 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 THAP5Q7Z6K1 395 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 OR51E1Q8TCB6 317 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 SGCDQ92629 289 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 SGK3Q96BR1 496 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 HAVCR1Q96D42 359 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 ELMOD3Q96FG2 381 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 LYZL4Q96KX0 146 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 C4orf36Q96KX1 117 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 PBOV1Q9GZY1 135 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 NARFLQ9H6Q4 476 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 ISG20L2Q9H9L3 353 aaKnown RBP11.26□□□□□ -0.61
TUBD1-202ENST00000340993 FAM206AQ9NX38 181 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 CACNG2Q9Y698 323 aa11.26□□□□□ -0.61
TUBD1-202ENST00000340993 METTL15A6NJ78 407 aa11.25□□□□□ -0.61
TUBD1-202ENST00000340993 LOC110117498-PIK3R3F6TDL0 507 aa11.25□□□□□ -0.61
TUBD1-202ENST00000340993 P2RY10O00398 339 aa11.25□□□□□ -0.61
TUBD1-202ENST00000340993 DAOP14920 347 aa11.25□□□□□ -0.61
TUBD1-202ENST00000340993 CA6P23280 308 aa11.25□□□□□ -0.61
TUBD1-202ENST00000340993 EFNA4P52798 201 aa11.25□□□□□ -0.61
TUBD1-202ENST00000340993 ZNF829Q3KNS6 432 aaPredicted RBP11.25□□□□□ -0.61
TUBD1-202ENST00000340993 BCL2L15Q5TBC7 163 aa11.25□□□□□ -0.61
TUBD1-202ENST00000340993 LIPNQ5VXI9 398 aa11.25□□□□□ -0.61
TUBD1-202ENST00000340993 FBXW12Q6X9E4 464 aa11.25□□□□□ -0.61
TUBD1-202ENST00000340993 PRSS45Q7RTY3 260 aa11.25□□□□□ -0.61
TUBD1-202ENST00000340993 ACBD7Q8N6N7 88 aa11.25□□□□□ -0.61
TUBD1-202ENST00000340993 COG8Q96MW5 612 aa11.25□□□□□ -0.61
TUBD1-202ENST00000340993 NIPAL2Q9H841 368 aa11.25□□□□□ -0.61
TUBD1-202ENST00000340993 DECR2Q9NUI1 292 aa11.25□□□□□ -0.61
TUBD1-202ENST00000340993 GPR160Q9UJ42 338 aa11.25□□□□□ -0.61
TUBD1-202ENST00000340993 EXOGQ9Y2C4 368 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms