RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 SLC26A10Q8NG04 563 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 SECTM1Q8WVN6 248 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 CMTM3Q96MX0 182 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 PURGQ9UJV8 347 aaKnown RBP12.65□□□□□ -0.38
PCDH8-201ENST00000338862 TRBV23-1A0A0A0MS06 115 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 IGHV5-51A0A0C4DH38 117 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 ZNF749O43361 778 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 FOXS1O43638 330 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 SMIM10L1P0DMW3 83 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 NQO2P16083 231 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 ADH6P28332 368 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 ACY1Q03154 408 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 PRAMEF20Q5VT98 475 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 PNLDC1Q8NA58 520 aaKnown RBP12.65□□□□□ -0.38
PCDH8-201ENST00000338862 RXFP4Q8TDU9 374 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 RNF128Q8TEB7 428 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 ASB17Q8WXJ9 295 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 SMIM10Q96HG1 83 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 METTL7AQ9H8H3 244 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 OR5AC2Q9NZP5 309 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 AMDHD2Q9Y303 409 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 FAM221BA6H8Z2 402 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 CSTBP04080 98 aaKnown RBP12.65□□□□□ -0.38
PCDH8-201ENST00000338862 SFTA3P0C7M3 94 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 CTHP32929 405 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 GPR3P46089 330 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 SLC25A1P53007 311 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 EIF5AL1Q6IS14 154 aaKnown RBP12.65□□□□□ -0.38
PCDH8-201ENST00000338862 C20orf196Q8IYI0 205 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 SLAMF6Q96DU3 332 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 ZNF285Q96NJ3 590 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 CUTCQ9NTM9 273 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 MRPL22Q9NWU5 206 aaKnown RBP12.65□□□□□ -0.38
PCDH8-201ENST00000338862 RAB22AQ9UL26 194 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 KCNK7Q9Y2U2 307 aa12.65□□□□□ -0.38
PCDH8-201ENST00000338862 TRBV5-5A0A0J9YX44 114 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 FAM230AA0A1W2PPH8 454 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 K7EPK0 472 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 CBX5P45973 191 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 C14orf28Q4W4Y0 310 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 RNF144BQ7Z419 303 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 FAM71E2Q8N5Q1 922 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 RNASE11Q8TAA1 199 aaKnown RBP12.64□□□□□ -0.39
PCDH8-201ENST00000338862 ADAT3Q96EY9 351 aaPredicted RBP12.64□□□□□ -0.39
PCDH8-201ENST00000338862 ARHGAP5-AS1Q96IT6 56 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 MESP1Q9BRJ9 268 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 SLCO1B1Q9Y6L6 691 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 CACNA1EQ15878 2313 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 COL4A3Q01955 1670 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 KIF26AQ9ULI4 1882 aaPredicted RBP12.64□□□□□ -0.39
PCDH8-201ENST00000338862 PRSS44E7EML9 344 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 OR3A4PP47883 348 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 CAV2P51636 162 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 OR1M1Q8NGA1 313 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 OR5AP2Q8NGF4 316 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 CTHRC1Q96CG8 243 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 NMNAT2Q9BZQ4 307 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 SCPEP1Q9HB40 452 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.64□□□□□ -0.39
PCDH8-201ENST00000338862 ZFP57Q9NU63 452 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 KLHL13Q9P2N7 655 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 AUP1Q9Y679 476 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 BCKDHBP21953 392 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 CCNOP22674 350 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 RPS10P46783 165 aaKnown RBP12.64□□□□□ -0.39
PCDH8-201ENST00000338862 SKP2Q13309 424 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 PTCRAQ6ISU1 281 aaPredicted RBP12.64□□□□□ -0.39
PCDH8-201ENST00000338862 RBMS3Q6XE24 437 aaKnown RBP12.64□□□□□ -0.39
PCDH8-201ENST00000338862 SLC22A24Q8N4F4 322 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 DAZLQ92904 295 aaKnown RBP12.64□□□□□ -0.39
PCDH8-201ENST00000338862 REEP6Q96HR9 211 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 RBM24Q9BX46 236 aaKnown RBP12.64□□□□□ -0.39
PCDH8-201ENST00000338862 FN3KRPQ9HA64 309 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 GPR84Q9NQS5 396 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 UQCC1Q9NVA1 299 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 PLEKHJ1Q9NW61 149 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 MEMO1Q9Y316 297 aa12.64□□□□□ -0.39
PCDH8-201ENST00000338862 RNF222A6NCQ9 220 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 STMND1H3BQB6 276 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 ZNHIT1O43257 154 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 ITGB2P05107 769 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 RPS4XP62701 263 aaKnown RBP12.63□□□□□ -0.39
PCDH8-201ENST00000338862 TLE1Q04724 770 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 LIN37Q96GY3 246 aaPredicted RBP12.63□□□□□ -0.39
PCDH8-201ENST00000338862 URM1Q9BTM9 101 aaKnown RBP12.63□□□□□ -0.39
PCDH8-201ENST00000338862 ZNF426Q9BUY5 554 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 SPACA1Q9HBV2 294 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 RNF215Q9Y6U7 377 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 LRRK1Q38SD2 2015 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 FRMPD3Q5JV73 1810 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 RER1O15258 196 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 C1QL1O75973 258 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 OR8U9P0C7N5 309 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 FBLP22087 321 aaKnown RBP12.63□□□□□ -0.39
PCDH8-201ENST00000338862 IGFBP4P22692 258 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 KIR2DL1P43626 348 aaPredicted RBP12.63□□□□□ -0.39
PCDH8-201ENST00000338862 BLKP51451 505 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 TSPO2Q5TGU0 170 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 R4GMQ9 66 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 KIR2DS5A0A0G2JLQ3 304 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms