RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 ANK2Q01484 3957 aa12.88□□□□□ -0.35
PRKN-201ENST00000338468 ZAR1LA6NP61 321 aa12.88□□□□□ -0.35
PRKN-201ENST00000338468 H3BNX3 289 aa12.88□□□□□ -0.35
PRKN-201ENST00000338468 PRKYO43930 277 aa12.88□□□□□ -0.35
PRKN-201ENST00000338468 TNFSF4P23510 183 aa12.88□□□□□ -0.35
PRKN-201ENST00000338468 OPRL1P41146 370 aa12.88□□□□□ -0.35
PRKN-201ENST00000338468 MALLQ13021 153 aa12.88□□□□□ -0.35
PRKN-201ENST00000338468 KPNB1Q14974 876 aaKnown RBP12.88□□□□□ -0.35
PRKN-201ENST00000338468 SLC35D3Q5M8T2 416 aa12.88□□□□□ -0.35
PRKN-201ENST00000338468 SHFQ7M4L6 423 aa12.88□□□□□ -0.35
PRKN-201ENST00000338468 OR13G1Q8NGZ3 307 aa12.88□□□□□ -0.35
PRKN-201ENST00000338468 OTOSQ8NHW6 89 aa12.88□□□□□ -0.35
PRKN-201ENST00000338468 CENPNQ96H22 339 aaPredicted RBP12.88□□□□□ -0.35
PRKN-201ENST00000338468 MEGF10Q96KG7 1140 aa12.88□□□□□ -0.35
PRKN-201ENST00000338468 SIGLEC11Q96RL6 698 aa12.88□□□□□ -0.35
PRKN-201ENST00000338468 TMEM106BQ9NUM4 274 aa12.88□□□□□ -0.35
PRKN-201ENST00000338468 OAZ3Q9UMX2 235 aa12.88□□□□□ -0.35
PRKN-201ENST00000338468 DYSFO75923 2080 aa12.88□□□□□ -0.35
PRKN-201ENST00000338468 F5H5P2 479 aa12.87□□□□□ -0.35
PRKN-201ENST00000338468 HLA-DPB1P04440 258 aa12.87□□□□□ -0.35
PRKN-201ENST00000338468 SELEP16581 610 aa12.87□□□□□ -0.35
PRKN-201ENST00000338468 POLR2IP36954 125 aaKnown RBP12.87□□□□□ -0.35
PRKN-201ENST00000338468 NAA10P41227 235 aaPredicted RBP12.87□□□□□ -0.35
PRKN-201ENST00000338468 GRB2P62993 217 aaKnown RBP12.87□□□□□ -0.35
PRKN-201ENST00000338468 APOFQ13790 326 aa12.87□□□□□ -0.35
PRKN-201ENST00000338468 TAF13Q15543 124 aa12.87□□□□□ -0.35
PRKN-201ENST00000338468 KRTAP24-1Q3LI83 254 aa12.87□□□□□ -0.35
PRKN-201ENST00000338468 FAM120AOSQ5T036 256 aa12.87□□□□□ -0.35
PRKN-201ENST00000338468 SLX4IPQ5VYV7 408 aa12.87□□□□□ -0.35
PRKN-201ENST00000338468 C12orf73Q69YU5 71 aa12.87□□□□□ -0.35
PRKN-201ENST00000338468 IL17RELQ6ZVW7 336 aa12.87□□□□□ -0.35
PRKN-201ENST00000338468 PGAP1Q75T13 922 aa12.87□□□□□ -0.35
PRKN-201ENST00000338468 RHOUQ7L0Q8 258 aa12.87□□□□□ -0.35
PRKN-201ENST00000338468 MRPL21Q7Z2W9 205 aaKnown RBP12.87□□□□□ -0.35
PRKN-201ENST00000338468 BCDIN3DQ7Z5W3 292 aaKnown RBP12.87□□□□□ -0.35
PRKN-201ENST00000338468 RAB1CQ92928 201 aa12.87□□□□□ -0.35
PRKN-201ENST00000338468 PLEKHA8Q96JA3 519 aa12.87□□□□□ -0.35
PRKN-201ENST00000338468 TEAD3Q99594 435 aa12.87□□□□□ -0.35
PRKN-201ENST00000338468 CIB1Q99828 191 aa12.87□□□□□ -0.35
PRKN-201ENST00000338468 PKP2Q99959 881 aa12.87□□□□□ -0.35
PRKN-201ENST00000338468 ZNF665Q9H7R5 613 aa12.87□□□□□ -0.35
PRKN-201ENST00000338468 GCM1Q9NP62 436 aa12.87□□□□□ -0.35
PRKN-201ENST00000338468 ZNF319Q9P2F9 582 aa12.87□□□□□ -0.35
PRKN-201ENST00000338468 SAC3D1A6NKF1 404 aa12.86□□□□□ -0.35
PRKN-201ENST00000338468 CD300LBA8K4G0 201 aa12.86□□□□□ -0.35
PRKN-201ENST00000338468 B4DSR2 109 aa12.86□□□□□ -0.35
PRKN-201ENST00000338468 IGHV2-70P01814 119 aa12.86□□□□□ -0.35
PRKN-201ENST00000338468 IGHV2-5P01817 119 aa12.86□□□□□ -0.35
PRKN-201ENST00000338468 TNFRSF1AP19438 455 aa12.86□□□□□ -0.35
PRKN-201ENST00000338468 PMELP40967 661 aa12.86□□□□□ -0.35
PRKN-201ENST00000338468 SLC15A1P46059 708 aa12.86□□□□□ -0.35
PRKN-201ENST00000338468 CX3CR1P49238 355 aa12.86□□□□□ -0.35
PRKN-201ENST00000338468 HCCSP53701 268 aa12.86□□□□□ -0.35
PRKN-201ENST00000338468 MAB21L1Q13394 359 aa12.86□□□□□ -0.35
PRKN-201ENST00000338468 CR1LQ2VPA4 569 aa12.86□□□□□ -0.35
PRKN-201ENST00000338468 ZNF454Q8N9F8 522 aa12.86□□□□□ -0.35
PRKN-201ENST00000338468 SPSB4Q96A44 273 aa12.86□□□□□ -0.35
PRKN-201ENST00000338468 TIMD4Q96H15 378 aa12.86□□□□□ -0.35
PRKN-201ENST00000338468 TEX12Q9BXU0 123 aa12.86□□□□□ -0.35
PRKN-201ENST00000338468 BEX2Q9BXY8 128 aa12.86□□□□□ -0.35
PRKN-201ENST00000338468 TOR3AQ9H497 397 aa12.86□□□□□ -0.35
PRKN-201ENST00000338468 LPAR2Q9HBW0 351 aa12.86□□□□□ -0.35
PRKN-201ENST00000338468 TMEM100Q9NV29 134 aa12.86□□□□□ -0.35
PRKN-201ENST00000338468 LPAR3Q9UBY5 353 aa12.86□□□□□ -0.35
PRKN-201ENST00000338468 PPP1R3CQ9UQK1 317 aa12.86□□□□□ -0.35
PRKN-201ENST00000338468 N6AMT1Q9Y5N5 214 aa12.86□□□□□ -0.35
PRKN-201ENST00000338468 IGHV3-64DA0A0J9YX35 117 aa12.85□□□□□ -0.35
PRKN-201ENST00000338468 PRR32B1ATL7 298 aa12.85□□□□□ -0.35
PRKN-201ENST00000338468 EBAG9O00559 213 aa12.85□□□□□ -0.35
PRKN-201ENST00000338468 LYNP07948 512 aa12.85□□□□□ -0.35
PRKN-201ENST00000338468 ALOX5APP20292 161 aa12.85□□□□□ -0.35
PRKN-201ENST00000338468 MMP16P51512 607 aa12.85□□□□□ -0.35
PRKN-201ENST00000338468 DVL1P1P54792 670 aaPredicted RBP12.85□□□□□ -0.35
PRKN-201ENST00000338468 ZNF121P58317 390 aaPredicted RBP12.85□□□□□ -0.35
PRKN-201ENST00000338468 RPS7P62081 194 aaKnown RBP12.85□□□□□ -0.35
PRKN-201ENST00000338468 SLC3A1Q07837 685 aa12.85□□□□□ -0.35
PRKN-201ENST00000338468 AADACL4Q5VUY2 407 aa12.85□□□□□ -0.35
PRKN-201ENST00000338468 ZNF420Q8TAQ5 688 aaPredicted RBP12.85□□□□□ -0.35
PRKN-201ENST00000338468 THEM6Q8WUY1 208 aa12.85□□□□□ -0.35
PRKN-201ENST00000338468 SGK3Q96BR1 496 aa12.85□□□□□ -0.35
PRKN-201ENST00000338468 C19orf24Q9BVV8 132 aa12.85□□□□□ -0.35
PRKN-201ENST00000338468 OSBPL10Q9BXB5 764 aa12.85□□□□□ -0.35
PRKN-201ENST00000338468 GABARAPL3Q9BY60 117 aa12.85□□□□□ -0.35
PRKN-201ENST00000338468 DNAJC27Q9NZQ0 273 aa12.85□□□□□ -0.35
PRKN-201ENST00000338468 NPTNQ9Y639 398 aa12.85□□□□□ -0.35
PRKN-201ENST00000338468 TMEM178BH3BS89 294 aa12.84□□□□□ -0.35
PRKN-201ENST00000338468 ANXA2P07355 339 aaKnown RBP12.84□□□□□ -0.35
PRKN-201ENST00000338468 MSMBP08118 114 aa12.84□□□□□ -0.35
PRKN-201ENST00000338468 H2BFMP0C1H6 154 aa12.84□□□□□ -0.35
PRKN-201ENST00000338468 CA6P23280 308 aa12.84□□□□□ -0.35
PRKN-201ENST00000338468 HSD11B1P28845 292 aa12.84□□□□□ -0.35
PRKN-201ENST00000338468 RAD23AP54725 363 aa12.84□□□□□ -0.35
PRKN-201ENST00000338468 FAM3AP98173 230 aa12.84□□□□□ -0.35
PRKN-201ENST00000338468 ZMYND11Q15326 602 aa12.84□□□□□ -0.35
PRKN-201ENST00000338468 FAM57BQ71RH2 274 aa12.84□□□□□ -0.35
PRKN-201ENST00000338468 ZNF771Q7L3S4 317 aaPredicted RBP12.84□□□□□ -0.35
PRKN-201ENST00000338468 SLC16A9Q7RTY1 509 aa12.84□□□□□ -0.35
PRKN-201ENST00000338468 TCEANCQ8N8B7 351 aa12.84□□□□□ -0.35
PRKN-201ENST00000338468 OR56B2PQ8NGI1 322 aa12.84□□□□□ -0.35
PRKN-201ENST00000338468 TMEM163Q8TC26 289 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms