RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 TMEM9BQ9NQ34 198 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 ARGFXA6NJG6 315 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 CBR3O75828 277 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 HTR2CP28335 458 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 MAGEA5P43359 124 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 ST3GAL2Q16842 350 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 NKPD1Q17RQ9 610 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 MAJINQ3KP22 176 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 LINC00303Q3SY05 128 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 PLA2G2CQ5R387 149 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 TMEM164Q5U3C3 297 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 ZIC4Q8N9L1 334 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 LHFPL5Q8TAF8 219 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 ZBTB8AQ96BR9 441 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 HAVCR1Q96D42 359 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 OR2M2Q96R28 347 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 BCL2L14Q9BZR8 327 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 CRLF2Q9HC73 371 aa11.11□□□□□ -0.63
LIMK1-201ENST00000336180 PIEZO2Q9H5I5 2752 aa11.1□□□□□ -0.63
LIMK1-201ENST00000336180 ZNF292O60281 2723 aa11.1□□□□□ -0.63
LIMK1-201ENST00000336180 A0A1W2PNV4 684 aa11.1□□□□□ -0.63
LIMK1-201ENST00000336180 NUPL2O15504 423 aaKnown RBP11.1□□□□□ -0.63
LIMK1-201ENST00000336180 WISP2O76076 250 aa11.1□□□□□ -0.63
LIMK1-201ENST00000336180 POU3F2P20265 443 aaPredicted RBP11.1□□□□□ -0.63
LIMK1-201ENST00000336180 RAD52P43351 418 aa11.1□□□□□ -0.63
LIMK1-201ENST00000336180 FOXG1P55316 489 aaPredicted RBP11.1□□□□□ -0.63
LIMK1-201ENST00000336180 PITPNAQ00169 270 aa11.1□□□□□ -0.63
LIMK1-201ENST00000336180 SSPNQ14714 243 aa11.1□□□□□ -0.63
LIMK1-201ENST00000336180 SLC25A47Q6Q0C1 308 aa11.1□□□□□ -0.63
LIMK1-201ENST00000336180 GALNTL5Q7Z4T8 443 aa11.1□□□□□ -0.63
LIMK1-201ENST00000336180 PLEK2Q9NYT0 353 aa11.1□□□□□ -0.63
LIMK1-201ENST00000336180 HDGFL3Q9Y3E1 203 aa11.1□□□□□ -0.63
LIMK1-201ENST00000336180 A0A096LPE4 126 aa11.1□□□□□ -0.63
LIMK1-201ENST00000336180 A0A1W2PPZ6 126 aa11.1□□□□□ -0.63
LIMK1-201ENST00000336180 SSNA1O43805 119 aa11.1□□□□□ -0.63
LIMK1-201ENST00000336180 CCL2P13500 99 aa11.1□□□□□ -0.63
LIMK1-201ENST00000336180 PMP22Q01453 160 aa11.1□□□□□ -0.63
LIMK1-201ENST00000336180 RIN1Q13671 783 aa11.1□□□□□ -0.63
LIMK1-201ENST00000336180 OLFML2AQ68BL7 652 aa11.1□□□□□ -0.63
LIMK1-201ENST00000336180 Q6ZTK2 550 aa11.1□□□□□ -0.63
LIMK1-201ENST00000336180 OR11H7Q8NGC8 314 aa11.1□□□□□ -0.63
LIMK1-201ENST00000336180 OR6X1Q8NH79 312 aa11.1□□□□□ -0.63
LIMK1-201ENST00000336180 FGFBP3Q8TAT2 258 aa11.1□□□□□ -0.63
LIMK1-201ENST00000336180 CMTM3Q96MX0 182 aa11.1□□□□□ -0.63
LIMK1-201ENST00000336180 PRR14LQ5THK1 2151 aa11.1□□□□□ -0.63
LIMK1-201ENST00000336180 RLN1P04808 185 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 CD63P08962 238 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 H2AFB2P0C5Z0 115 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 GUCA1AP43080 201 aaPredicted RBP11.09□□□□□ -0.63
LIMK1-201ENST00000336180 B3GALT5-AS1P59052 145 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 ABHD17BQ5VST6 288 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 DBX2Q6ZNG2 339 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 GVQW1Q8N7I0 195 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 ZNF454Q8N9F8 522 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 PCNPQ8WW12 178 aaKnown RBP11.09□□□□□ -0.63
LIMK1-201ENST00000336180 NICN1Q9BSH3 213 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 MED28Q9H204 178 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 A0A1B0GVI7 797 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 GTF2F2P13984 249 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 CCNOP22674 350 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 RRAS2P62070 204 aaPredicted RBP11.09□□□□□ -0.63
LIMK1-201ENST00000336180 TRIP6Q15654 476 aaKnown RBP11.09□□□□□ -0.63
LIMK1-201ENST00000336180 C17orf107Q6ZR85 190 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 ZNF101Q8IZC7 436 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 MNTQ99583 582 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 PIGQQ9BRB3 760 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 TMEM246Q9BRR3 403 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 C20orf85Q9H1P6 137 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 ELL3Q9HB65 397 aaPredicted RBP11.09□□□□□ -0.63
LIMK1-201ENST00000336180 SH2D2AQ9NP31 389 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 GGT3PA6NGU5 568 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 LINC00587B1AMM8 73 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 ETV2O00321 342 aaPredicted RBP11.09□□□□□ -0.63
LIMK1-201ENST00000336180 TOR1AO14656 332 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 GLSO94925 669 aaPredicted RBP11.09□□□□□ -0.63
LIMK1-201ENST00000336180 SIX6O95475 246 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 CD3DP04234 171 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 SERPINA7P05543 415 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 FAHP16930 419 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 ZNF20P17024 532 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 C16orf54Q6UWD8 224 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 SLC25A43Q8WUT9 341 aaPredicted RBP11.09□□□□□ -0.63
LIMK1-201ENST00000336180 NUDCD2Q8WVJ2 157 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 PIGTQ969N2 578 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 FBXW5Q969U6 566 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 FBXO17Q96EF6 278 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 PGAM5Q96HS1 289 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 DEFB127Q9H1M4 99 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 OR51B6Q9H340 312 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 PCDHGA5Q9Y5G8 931 aa11.09□□□□□ -0.63
LIMK1-201ENST00000336180 OR6C65A6NJZ3 312 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 SLC17A2O00624 439 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 NEURL1O76050 574 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 CD1AP06126 327 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 HCKP08631 526 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 OR3A4PP47883 348 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 H3F3AP84243 136 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 PLGLB1Q02325 96 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 PMPCAQ10713 525 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 OR1C1Q15619 314 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms